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5J48
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PKG I's Carboyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-pCPT-cGMP
分子名称: 1,2-ETHANEDIOL, 2-amino-8-[(4-chlorophenyl)sulfanyl]-9-[(2S,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-3,9-dihydro-6H-purin-6-one, CALCIUM ION, ...
著者Campbell, J.C, Sankaran, B, Kim, C.W.
登録日2016-03-31
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural Basis of Analog Specificity in PKG I and II.
ACS Chem. Biol., 12, 2017
7SSB
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Co-structure of PKG1 regulatory domain with compound 33
分子名称: 4-({(2S,3S)-3-[(1S)-1-(3,5-dichlorophenyl)-2-hydroxyethoxy]-2-phenylpiperidin-1-yl}methyl)-3-nitrobenzoic acid, cGMP-dependent protein kinase 1
著者Fischmann, T.O.
登録日2021-11-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Optimization and Mechanistic Investigations of Novel Allosteric Activators of PKG1 alpha.
J.Med.Chem., 65, 2022
2K0G
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Solution Structure of a Bacterial Cyclic Nucleotide-Activated K+ Channel Binding Domain in Complex with cAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Mll3241 protein
著者Schunke, S, Stoldt, M, Willbold, D.
登録日2008-02-02
公開日2009-02-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the Mesorhizobium loti K1 channel cyclic nucleotide-binding domain in complex with cAMP.
Embo Rep., 10, 2009
2KXL
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Solution structure of a bacterial cyclic nucleotide-activated K+ channel binding domain in the unliganded state
分子名称: Cyclic nucleotide-gated potassium channel mll3241
著者Schunke, S, Stoldt, M, Willbold, D.
登録日2010-05-10
公開日2011-04-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insights into conformational changes of a cyclic nucleotide-binding domain in solution from Mesorhizobium loti K1 channel.
Proc.Natl.Acad.Sci.USA, 108, 2011
4OFF
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BU of 4off by Molmil
Crystal structure of apo carboxy cGMP binding domain of Plasmodium falciparum PKG
分子名称: CGMP-dependent protein kinase, SULFATE ION
著者Kim, J.J, Sanabria figueroa, E, Kim, C.
登録日2014-01-14
公開日2015-01-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.888 Å)
主引用文献Crystal Structures of the Carboxyl cGMP Binding Domain of the Plasmodium falciparum cGMP-dependent Protein Kinase Reveal a Novel Capping Triad Crucial for Merozoite Egress.
Plos Pathog., 11, 2015
4OFG
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BU of 4ofg by Molmil
Co-crystal structure of carboxy cGMP binding domain of Plasmodium falciparum PKG with cGMP
分子名称: CGMP-dependent protein kinase, CYCLIC GUANOSINE MONOPHOSPHATE, ETHANOL, ...
著者Kim, J.J, Sanabria figueroa, E, Kim, C.
登録日2014-01-14
公開日2015-01-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of the Carboxyl cGMP Binding Domain of the Plasmodium falciparum cGMP-dependent Protein Kinase Reveal a Novel Capping Triad Crucial for Merozoite Egress.
Plos Pathog., 11, 2015
2Z69
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BU of 2z69 by Molmil
Crystal Structure of the sensor domain of the transcriptional regulator DNR from Pseudomonas aeruginosa
分子名称: DNR protein
著者Giardina, G, Johnson, K.A, Di Matteo, A.
登録日2007-07-24
公開日2008-03-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR.
J.Mol.Biol., 378, 2008
2MHF
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Solution structure of the cyclic-nucleotide binding homology domain of a KCNH channel
分子名称: Uncharacterized protein
著者Li, Q, Ng, H.
登録日2013-11-21
公開日2014-04-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the cyclic-nucleotide binding homology domain of a KCNH channel.
J.Struct.Biol., 186, 2014
4HBN
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Crystal structure of the human HCN4 channel C-terminus carrying the S672R mutation
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, PHOSPHATE ION, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
著者Xu, X, Marni, F, Wu, X, Su, Z, Musayev, F, Shrestha, S, Xie, C, Gao, W, Liu, Q, Zhou, L.
登録日2012-09-28
公開日2013-01-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Local and Global Interpretations of a Disease-Causing Mutation near the Ligand Entry Path in Hyperpolarization-Activated cAMP-Gated Channel.
Structure, 20, 2012
5V30
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Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
分子名称: GLYCEROL, SULFATE ION, Transcriptional regulator
著者Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
登録日2017-03-06
公開日2018-06-13
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
6BQ8
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BU of 6bq8 by Molmil
Joint X-ray/neutron structure of PKG II CNB-B domain in complex with 8-pCPT-cGMP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(~2~H_2_)amino-8-[(4-chlorophenyl)sulfanyl]-9-[(2S,4aR,6R,7R,7aS)-2-hydroxy-7-(~2~H)hydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl](~2~H)-1,9-dihydro-6H-purin-6-one, STRONTIUM ION, ...
著者Kim, C, Kovalevsky, A, Gerlits, O.
登録日2017-11-27
公開日2018-03-21
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
主引用文献Neutron Crystallography Detects Differences in Protein Dynamics: Structure of the PKG II Cyclic Nucleotide Binding Domain in Complex with an Activator.
Biochemistry, 57, 2018
6CPB
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BU of 6cpb by Molmil
Crystal structure of the heme domain of CooA from Carboxydothermus hydrogenoformans
分子名称: Carbon monoxide oxidation system transcription regulator CooA-1, GLYCEROL, SULFATE ION
著者Tripathi, S.M, Poulos, T.L.
登録日2018-03-13
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.155 Å)
主引用文献Testing the N-Terminal Velcro Model of CooA Carbon Monoxide Activation.
Biochemistry, 57, 2018
4NVP
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BU of 4nvp by Molmil
Structure of the cyclic nucleotide-binding domain of HCN4 channel complexed with 7-CH-cAMP
分子名称: (2S,4aR,6R,7R,7aS)-6-(4-amino-7H-pyrrolo[2,3-d]pyrimidin-7-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
著者Alfieri, A, Moroni, A.
登録日2013-12-05
公開日2014-03-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cyclic Nucleotide Mapping of Hyperpolarization-Activated Cyclic Nucleotide-Gated (HCN) Channels.
Acs Chem.Biol., 9, 2014
2PTM
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BU of 2ptm by Molmil
Structure and rearrangements in the carboxy-terminal region of SpIH channels
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, COBALT HEXAMMINE(III), Hyperpolarization-activated (Ih) channel
著者Flynn, G.E, Black, K.D, Islas, L.D, Sankaran, B, Zagotta, W.N.
登録日2007-05-08
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure and rearrangements in the carboxy-terminal region of SpIH channels.
Structure, 15, 2007
2PQQ
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BU of 2pqq by Molmil
Structural Genomics, the crystal structure of the N-terminal domain of a transcriptional regulator from Streptomyces coelicolor A3(2)
分子名称: FORMIC ACID, Putative transcriptional regulator
著者Tan, K, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-05-02
公開日2007-06-05
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the N-terminal domain of a transcriptional regulator from Streptomyces coelicolor A3(2)
To be Published
4QX5
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BU of 4qx5 by Molmil
Neutron diffraction reveals hydrogen bonds critical for cGMP-selective activation: Insights for PKG agonist design
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, IODIDE ION, cGMP-dependent protein kinase 1
著者Huang, G.Y, Gerlits, O.O, Blakeley, M.P, Sankaran, B, Kovalevsky, A.Y, Kim, C.
登録日2014-07-18
公開日2014-11-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.318 Å)
主引用文献Neutron Diffraction Reveals Hydrogen Bonds Critical for cGMP-Selective Activation: Insights for cGMP-Dependent Protein Kinase Agonist Design.
Biochemistry, 53, 2014
4QXK
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BU of 4qxk by Molmil
Joint X-ray/neutron structure of PKGIbeta in complex with cGMP
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, SODIUM ION, cGMP-dependent protein kinase 1
著者Kim, C, Gerlits, O, Kovalevsky, A, Huang, G.Y.
登録日2014-07-21
公開日2014-11-12
最終更新日2024-02-28
実験手法NEUTRON DIFFRACTION (2.2 Å), X-RAY DIFFRACTION
主引用文献Neutron Diffraction Reveals Hydrogen Bonds Critical for cGMP-Selective Activation: Insights for cGMP-Dependent Protein Kinase Agonist Design.
Biochemistry, 53, 2014
2N7G
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Structure of the cyclic nucleotide-binding homology domain of the hERG channel
分子名称: Potassium voltage-gated channel subfamily H member 2
著者Li, Y, Ng, H, Li, Q, Kang, C.
登録日2015-09-10
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the Cyclic Nucleotide-Binding Homology Domain of the hERG Channel and Its Insight into Type 2 Long QT Syndrome
Sci Rep, 6, 2016
2Q0A
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BU of 2q0a by Molmil
Structure and rearrangements in the carboxy-terminal region of SpIH channels
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
著者Flynn, G.E, Black, K.D, Islas, L.D, Sankaran, B, Zagotta, W.N.
登録日2007-05-21
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and rearrangements in the carboxy-terminal region of SpIH channels.
Structure, 15, 2007
2MPF
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BU of 2mpf by Molmil
Solution structure human HCN2 CNBD in the cAMP-unbound state
分子名称: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
著者Saponaro, A, Pauleta, S.R, Cantini, F, Matzapetakis, M, Hammann, C, Banci, L, Thiel, G, Santoro, B, Moroni, A.
登録日2014-05-16
公開日2014-09-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for the mutual antagonism of cAMP and TRIP8b in regulating HCN channel function.
Proc.Natl.Acad.Sci.USA, 111, 2014
3BPZ
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HCN2-I 443-460 E502K in the presence of cAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
著者Craven, K.B, Olivier, N.B, Zagotta, W.N.
登録日2007-12-19
公開日2008-03-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献C-terminal movement during gating in cyclic nucleotide-modulated channels.
J.Biol.Chem., 283, 2008
2MNG
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Apo Structure of human HCN4 CNBD solved by NMR
分子名称: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
著者Akimoto, M, Zhang, Z, Boulton, S, Selvaratnam, R, VanSchouwen, B, Gloyd, M, Accili, E.A, Lange, O.F, Melacini, G.
登録日2014-04-03
公開日2014-06-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP.
J.Biol.Chem., 289, 2014
6HQ3
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Structure of EAL Enzyme Bd1971 - halfsite-occupied form
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, EAL Enzyme Bd1971
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HQ2
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Structure of EAL Enzyme Bd1971 - apo form
分子名称: EAL Enzyme Bd1971
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HYI
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Regulatory subunit of a cAMP-independent protein kinase A from Trypanosoma cruzi at 1.4 A resolution in complex with inosine
分子名称: INOSINE, Protein kinase A regulatory subunit
著者Volpato Santos, Y, Lorentzen, E, Basquin, J, Boshart, M.
登録日2018-10-22
公開日2019-11-13
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.39944851 Å)
主引用文献Purine nucleosides replace cAMP in allosteric regulation of PKA in trypanosomatid pathogens.
Elife, 12, 2024

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