Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8AMX
DownloadVisualize
BU of 8amx by Molmil
AQP7 dimer of tetramers_D4
分子名称: Aquaporin-7
著者Huang, P, Venskutonyte, R, Fan, X, Li, P, Yan, N, Gourdon, P, Lindkvist-Petersson, K.
登録日2022-08-04
公開日2023-02-15
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Cryo-EM structure supports a role of AQP7 as a junction protein.
Nat Commun, 14, 2023
8AEZ
DownloadVisualize
BU of 8aez by Molmil
X-ray structure of the deglycosylated receptor binding domain of Env glycoprotein of Simian Foamy virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp130, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Backovic, M.
登録日2022-07-14
公開日2023-02-22
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2.574 Å)
主引用文献The crystal structure of a simian Foamy Virus receptor binding domain provides clues about entry into host cells.
Nat Commun, 14, 2023
8AIC
DownloadVisualize
BU of 8aic by Molmil
X-ray structure of the receptor binding domain of Env glycoprotein of Simian Foamy virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp130, ...
著者Backovic, M, Fernandez, I.
登録日2022-07-26
公開日2023-02-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of a simian Foamy Virus receptor binding domain provides clues about entry into host cells.
Nat Commun, 14, 2023
8AYR
DownloadVisualize
BU of 8ayr by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
分子名称: CALCIUM ION, Coagulation factor 5/8 type domain protein
著者Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
登録日2022-09-02
公開日2023-03-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
8AXT
DownloadVisualize
BU of 8axt by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
分子名称: CALCIUM ION, CHLORIDE ION, Sialidase domain-containing protein
著者Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
登録日2022-08-31
公開日2023-03-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
8ALK
DownloadVisualize
BU of 8alk by Molmil
Structure of the Legionella phosphocholine hydrolase Lem3 in complex with its substrate Rab1
分子名称: 2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxyethyl-[3-(2-chloranylethanoylamino)propyl]-dimethyl-azanium, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kaspers, M.S, Pett, C, Hedberg, C, Itzen, A, Pogenberg, V.
登録日2022-08-01
公開日2023-04-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Dephosphocholination by Legionella effector Lem3 functions through remodelling of the switch II region of Rab1b.
Nat Commun, 14, 2023
6QLT
DownloadVisualize
BU of 6qlt by Molmil
Galectin-3C in complex with fluoroaryltriazole monothiogalactoside derivative-7
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-(2-fluorophenyl)-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, DI(HYDROXYETHYL)ETHER, Galectin-3
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019
6KTB
DownloadVisualize
BU of 6ktb by Molmil
Crystal structure of B. halodurans MntR in apo form
分子名称: HTH-type transcriptional regulator MntR, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Lee, J.Y, Lee, M.Y.
登録日2019-08-26
公開日2019-12-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural analysis of the manganese transport regulator MntR from Bacillus halodurans in apo and manganese bound forms.
Plos One, 14, 2019
8AAJ
DownloadVisualize
BU of 8aaj by Molmil
Crystal structure of the Pyrococcus abyssi RPA (apo form)
分子名称: RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination, RPA32 subunit of the hetero-oligomeric complex involved in homologous recombination, Replication factor A, ...
著者Legrand, P, Madru, C, Sauguet, L.
登録日2022-07-01
公開日2023-05-03
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献DNA-binding mechanism and evolution of replication protein A.
Nat Commun, 14, 2023
8AA9
DownloadVisualize
BU of 8aa9 by Molmil
Crystal structure of the Rpa1 AROD-OB-1 domains
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Replication factor A
著者Madru, C, Legrand, P, Sauguet, L.
登録日2022-06-30
公開日2023-05-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DNA-binding mechanism and evolution of replication protein A.
Nat Commun, 14, 2023
8AAS
DownloadVisualize
BU of 8aas by Molmil
Crystal structure of the Pyrococcus abyssi RPA trimerization core bound to poly-dT20 ssDNA
分子名称: CALCIUM ION, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination, ...
著者Madru, C, Legrand, P, Sauguet, L.
登録日2022-07-01
公開日2023-05-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献DNA-binding mechanism and evolution of replication protein A.
Nat Commun, 14, 2023
8ACT
DownloadVisualize
BU of 8act by Molmil
structure of the human beta-cardiac myosin folded-back off state
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin light chain 3, ...
著者Grinzato, A, Kandiah, E, Robert-Paganin, J, Auguin, D, Kikuti, C, Nandwani, N, Moussaoui, D, Pathak, D, Ruppel, K.M, Spudich, J.A, Houdusse, A.
登録日2022-07-06
公開日2023-06-07
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the folded-back state of human beta-cardiac myosin.
Nat Commun, 14, 2023
8ADK
DownloadVisualize
BU of 8adk by Molmil
Poly(ADP-ribose) glycohydrolase (PARG) from Drosophila melanogaster
分子名称: CHLORIDE ION, GLYCEROL, Poly(ADP-ribose) glycohydrolase, ...
著者Ariza, A, Fontana, P.
登録日2022-07-08
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.474 Å)
主引用文献Serine ADP-ribosylation in Drosophila provides insights into the evolution of reversible ADP-ribosylation signalling.
Nat Commun, 14, 2023
6QLO
DownloadVisualize
BU of 6qlo by Molmil
Galectin-3C in complex with substituted fluoroaryltriazole monothiogalactoside derivative 1
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[3,4-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, CHLORIDE ION, Galectin-3
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019
6QLQ
DownloadVisualize
BU of 6qlq by Molmil
Galectin-3C in complex with fluoroaryltriazole monothiogalactoside derivative 4
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-(4-fluorophenyl)-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.079 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019
8ADJ
DownloadVisualize
BU of 8adj by Molmil
Poly(ADP-ribose) glycohydrolase (PARG) from Drosophila melanogaster in complex with PARG inhibitor PDD00017272
分子名称: 1-[(2,5-dimethylpyrazol-3-yl)methyl]-N-(1-methylcyclopropyl)-3-[(2-methyl-1,3-thiazol-5-yl)methyl]-2,4-bis(oxidanylidene)quinazoline-6-sulfonamide, CHLORIDE ION, GLYCEROL, ...
著者Ariza, A, Fontana, P.
登録日2022-07-08
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.508 Å)
主引用文献Serine ADP-ribosylation in Drosophila provides insights into the evolution of reversible ADP-ribosylation signalling.
Nat Commun, 14, 2023
6QLR
DownloadVisualize
BU of 6qlr by Molmil
Galectin-3C in complex with fluoroaryltriazole monothiogalactoside derivative 5
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, CHLORIDE ION, Galectin-3
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019
8ARL
DownloadVisualize
BU of 8arl by Molmil
Plasmodium vivax PVP01_0000100 TRAg domain
分子名称: Tryptophan-rich antigen
著者Kundu, P, Deane, J.E, Rayner, J.C.
登録日2022-08-17
公開日2023-07-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structure of a Plasmodium vivax Tryptophan Rich Antigen domain suggests a lipid binding function for a pan-Plasmodium multi-gene family.
Nat Commun, 14, 2023
8AN4
DownloadVisualize
BU of 8an4 by Molmil
MenT1 toxin (rv0078a) from Mycobacterium tuberculosis H37Rv
分子名称: Bacterial toxin
著者Xu, X, Usher, B, Gutierrez, C, Barriot, R, Arrowsmith, T.J, Han, X, Redder, P, Neyrolles, O, Blower, T.R, Genevaux, P.
登録日2022-08-04
公開日2023-08-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献MenT nucleotidyltransferase toxins extend tRNA acceptor stems and can be inhibited by asymmetrical antitoxin binding.
Nat Commun, 14, 2023
8ANH
DownloadVisualize
BU of 8anh by Molmil
Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from 30% acetonitrile
分子名称: ACETONITRILE, Peptide LYIQWL from Tc5b, trifluoroacetic acid
著者Durvanger, Z.
登録日2022-08-05
公開日2023-08-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
8AHO
DownloadVisualize
BU of 8aho by Molmil
Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with cyanamide analogue 31
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, NITRATE ION, ...
著者de Munnik, M, Lang, P.A, Brem, J, Schofield, C.J.
登録日2022-07-22
公開日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献High-throughput screen with the l,d-transpeptidase Ldt Mt2 of Mycobacterium tuberculosis reveals novel classes of covalently reacting inhibitors.
Chem Sci, 14, 2023
8ANN
DownloadVisualize
BU of 8ann by Molmil
Structure of the amyloid-forming peptide LFIEWL from exendin-4, grown from acetonitrile / water
分子名称: Peptide LFIEWL from exendin-4
著者Durvanger, Z.
登録日2022-08-05
公開日2023-08-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
8ANM
DownloadVisualize
BU of 8anm by Molmil
Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from water
分子名称: Peptide LYIQWL from Tc5b
著者Durvanger, Z.
登録日2022-08-05
公開日2023-08-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
8ANL
DownloadVisualize
BU of 8anl by Molmil
Structure of the amyloid-forming peptide LFIEWL from exendin-4, grown from water
分子名称: Peptide LFIEWL from exendin-4
著者Durvanger, Z.
登録日2022-08-05
公開日2023-08-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
8AN5
DownloadVisualize
BU of 8an5 by Molmil
MenAT1 toxin-antitoxin complex (rv0078a-rv0078b) from Mycobacterium tuberculosis H37Rv
分子名称: Bacterial toxin, Conserved protein
著者Xu, X, Usher, B, Gutierrez, C, Barriot, R, Arrowsmith, T.J, Han, X, Redder, P, Neyrolles, O, Blower, T.R, Genevaux, P.
登録日2022-08-04
公開日2023-08-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献MenT nucleotidyltransferase toxins extend tRNA acceptor stems and can be inhibited by asymmetrical antitoxin binding.
Nat Commun, 14, 2023

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon