Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2NPW
DownloadVisualize
BU of 2npw by Molmil
Solution Structures of a DNA Dodecamer Duplex with a Cisplatin 1,2-d(GG) Intrastrand Cross-Link
分子名称: 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3', Cisplatin
著者Wu, Y, Bhattacharyya, D, Chaney, S, Campbell, S.
登録日2006-10-30
公開日2007-06-12
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structures of a DNA Dodecamer Duplex with and without a Cisplatin 1,2-d(GG) Intrastrand Cross-Link: Comparison with the Same DNA Duplex Containing an Oxaliplatin 1,2-d(GG) Intrastrand Cross-Link
Biochemistry, 46, 2007
2NQ1
DownloadVisualize
BU of 2nq1 by Molmil
Solution Structures of a DNA Dodecamer Duplex
分子名称: 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3'
著者Bhattacharyya, D, Wu, Y, Chaney, S, Campbell, S.
登録日2006-10-30
公開日2007-06-12
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structures of a DNA Dodecamer Duplex with and without a Cisplatin 1,2-d(GG) Intrastrand Cross-Link: Comparison with the Same DNA Duplex Containing an Oxaliplatin 1,2-d(GG) Intrastrand Cross-Link
Biochemistry, 46, 2007
4FSO
DownloadVisualize
BU of 4fso by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK10 (OpdN)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, Probable porin
著者Eren, E, van den Berg, B.
登録日2012-06-27
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structures of OccK Subfamily Proteins
To be Published
4FUV
DownloadVisualize
BU of 4fuv by Molmil
Crystal Structure of Acinetobacter baumannii CarO
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin protein associated with imipenem resistance
著者Eren, E, van den Berg, B.
登録日2012-06-28
公開日2013-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein
To be Published
5W3U
DownloadVisualize
BU of 5w3u by Molmil
Crystal structure of SsoPox AsB5 mutant (V27A-I76T-Y97W-Y99F-L130P-L226V)
分子名称: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
著者Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
登録日2017-06-08
公開日2017-12-20
最終更新日2021-08-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017
4GG6
DownloadVisualize
BU of 4gg6 by Molmil
Protein complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DQ alpha 1 chain, ...
著者Broughton, S.E, Theodossis, A, Petersen, J, Reid, H.H, Rossjohn, J.
登録日2012-08-06
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Biased T cell receptor usage directed against human leukocyte antigen DQ8-restricted gliadin peptides is associated with celiac disease.
Immunity, 37, 2012
5VR8
DownloadVisualize
BU of 5vr8 by Molmil
Human UDP-Glucose Dehydrogenase with UDP-Xylose Bound to the Co-enzyme Site
分子名称: ADENOSINE-5'-DIPHOSPHATE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
著者Kadirvelraj, R, Beattie, N.R, Wood, Z.A.
登録日2017-05-10
公開日2017-07-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献The entropic force generated by intrinsically disordered segments tunes protein function.
Nature, 563, 2018
4FRX
DownloadVisualize
BU of 4frx by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK8 (OprE)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Anaerobically-induced outer membrane porin OprE
著者Eren, E, van den Berg, B.
登録日2012-06-26
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of OccK Subfamily Proteins
To be Published
4FSP
DownloadVisualize
BU of 4fsp by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK11 (OpdR)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin
著者Eren, E, van den Berg, B.
登録日2012-06-27
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Crystal Structures of OccK Subfamily Proteins
To be Published
4FT6
DownloadVisualize
BU of 4ft6 by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK9 (OpdG)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, DECYL-BETA-D-MALTOPYRANOSIDE, Probable porin
著者Eren, E, van den Berg, B.
登録日2012-06-27
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Crystal Structures of OccK Subfamily Proteins
To be Published
5VRI
DownloadVisualize
BU of 5vri by Molmil
Crystal structure of SsoPox AsA6 mutant (F46L-C258A-W263M-I280T) - closed form
分子名称: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
著者Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
登録日2017-05-10
公開日2017-12-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017
5W4X
DownloadVisualize
BU of 5w4x by Molmil
Truncated hUGDH
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, UDP-glucose 6-dehydrogenase
著者Sennett, N.C, Custer, G.S, Wood, Z.A.
登録日2017-06-13
公開日2017-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The entropic force generated by intrinsically disordered segments tunes protein function.
Nature, 563, 2018
4GDJ
DownloadVisualize
BU of 4gdj by Molmil
A subtype N10 neuraminidase-like protein of A/little yellow-shouldered bat/Guatemala/060/2010
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase, ...
著者Zhu, X, Wilson, I.A.
登録日2012-07-31
公開日2012-09-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GFT
DownloadVisualize
BU of 4gft by Molmil
Malaria invasion machinery protein-Nanobody complex
分子名称: 1,2-ETHANEDIOL, Myosin A tail domain interacting protein, Nanobody
著者Khamrui, S, Turley, S, Pardon, E, Steyaert, J, Verlinde, C, Fan, E, Bergman, L.W, Hol, W.G.J.
登録日2012-08-03
公開日2013-07-03
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of the D3 domain of Plasmodium falciparum myosin tail interacting protein MTIP in complex with a nanobody.
Mol.Biochem.Parasitol., 190, 2013
4GG8
DownloadVisualize
BU of 4gg8 by Molmil
Immune Receptor
分子名称: T-CELL RECEPTOR, SP3.4 ALPHA CHAIN, SP3.4 BETA CHAIN, ...
著者Broughton, S.E, Theodossis, A, Petersen, J, Reid, H.H, Rossjohn, J.
登録日2012-08-06
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Biased T cell receptor usage directed against human leukocyte antigen DQ8-restricted gliadin peptides is associated with celiac disease.
Immunity, 37, 2012
5W1W
DownloadVisualize
BU of 5w1w by Molmil
Structure of the HLA-E-VMAPRTLVL/GF4 TCR complex
分子名称: Beta-2-microglobulin, GF4 T cell receptor alpha chain, GF4 T cell receptor beta chain, ...
著者Gras, S, Walpole, N, Farenc, C, Rossjohn, J.
登録日2017-06-05
公開日2017-10-04
最終更新日2018-01-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A conserved energetic footprint underpins recognition of human leukocyte antigen-E by two distinct alpha beta T cell receptors.
J. Biol. Chem., 292, 2017
5W90
DownloadVisualize
BU of 5w90 by Molmil
FEZ-1 metallo-beta-lactamase from Legionella gormanii modelled with unknown ligand
分子名称: FEZ-1 protein, GLYCEROL, SULFATE ION, ...
著者Garcia-Saez, I, Mercuri, P.S, Kahn, R, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Papamicael, C, Frere, J.M, Galleni, M, Dideberg, O.
登録日2017-06-22
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Three-dimensional structure of FEZ-1, a monomeric subclass B3 metallo-beta-lactamase from Fluoribacter gormanii, in native form and in complex with D-captopril.
J. Mol. Biol., 325, 2003
5WHR
DownloadVisualize
BU of 5whr by Molmil
Discovery of a novel and selective IDO-1 inhibitor PF-06840003 and its characterization as a potential clinical candidate.
分子名称: (3R)-3-(5-fluoro-1H-indol-3-yl)pyrrolidine-2,5-dione, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Greasley, S.E, Kaiser, S.E, Feng, J.L, Stewart, A.
登録日2017-07-18
公開日2017-12-27
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Discovery of a Novel and Selective Indoleamine 2,3-Dioxygenase (IDO-1) Inhibitor 3-(5-Fluoro-1H-indol-3-yl)pyrrolidine-2,5-dione (EOS200271/PF-06840003) and Its Characterization as a Potential Clinical Candidate.
J. Med. Chem., 60, 2017
5WIA
DownloadVisualize
BU of 5wia by Molmil
Crystal structure of the segment, GNNSYS, from the low complexity domain of TDP-43, residues 370-375
分子名称: TAR DNA-binding protein 43
著者Guenther, E.L, Trinh, H, Sawaya, M.R, Eisenberg, D.S.
登録日2017-07-18
公開日2018-04-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.002 Å)
主引用文献Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.
Nat. Struct. Mol. Biol., 25, 2018
5WKD
DownloadVisualize
BU of 5wkd by Molmil
Crystal structure of the segment, GNNQGSN, from the low complexity domain of TDP-43, residues 300-306
分子名称: TAR DNA-binding protein 43
著者Guenther, E.L, Trinh, H, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2017-07-25
公開日2018-04-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.
Nat. Struct. Mol. Biol., 25, 2018
4GEZ
DownloadVisualize
BU of 4gez by Molmil
Structure of a neuraminidase-like protein from A/bat/Guatemala/164/2009
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yang, H, Carney, P.J, Donis, R.O, Stevens, J.
登録日2012-08-02
公開日2012-09-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site.
Proc.Natl.Acad.Sci.USA, 109, 2012
5WOR
DownloadVisualize
BU of 5wor by Molmil
Corkscrew assembly of SOD1 residues 28-38 with familial mutation G37R
分子名称: GLYCEROL, MALONATE ION, Superoxide dismutase [Cu-Zn]
著者Sangwan, S, Sawaya, M.R, Eisenberg, D.S.
登録日2017-08-02
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations.
Protein Sci., 27, 2018
4GEY
DownloadVisualize
BU of 4gey by Molmil
High pH structure of Pseudomonas putida OprB
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, DECYL-BETA-D-MALTOPYRANOSIDE, PHOSPHATE ION, ...
著者van den Berg, B.
登録日2012-08-02
公開日2012-10-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for outer membrane sugar uptake in pseudomonads.
J.Biol.Chem., 287, 2012
4GK7
DownloadVisualize
BU of 4gk7 by Molmil
yeast 20S proteasome in complex with the Syringolin-Glidobactin chimera
分子名称: Proteasome component C1, Proteasome component C11, Proteasome component C5, ...
著者Groll, M, Stein, M.L, Bachmann, A.
登録日2012-08-10
公開日2012-08-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Activity enhancement of the synthetic syrbactin proteasome inhibitor hybrid and biological evaluation in tumor cells.
Biochemistry, 51, 2012
4GFH
DownloadVisualize
BU of 4gfh by Molmil
Topoisomerase II-DNA-AMPPNP complex
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), DNA (5'-D(P*CP*CP*TP*AP*CP*TP*GP*CP*TP*AP*C)-3'), ...
著者Schmidt, B.H, Osheroff, N, Berger, J.M.
登録日2012-08-03
公開日2012-10-03
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (4.408 Å)
主引用文献Structure of a topoisomerase II-DNA-nucleotide complex reveals a new control mechanism for ATPase activity.
Nat.Struct.Mol.Biol., 19, 2012

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon