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3VU0
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Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (AfAglB-S2, AF_0040, O30195_ARCFU) from Archaeoglobus fulgidus
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative uncharacterized protein
著者Nyirenda, J, Matsumoto, S, Saitoh, T, Maita, N, Noda, N.N, Inagaki, F, Kohda, D.
登録日2012-06-13
公開日2013-01-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystallographic and NMR Evidence for Flexibility in Oligosaccharyltransferases and Its Catalytic Significance
Structure, 21, 2013
3VU1
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Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PhAglB-L, O74088_PYRHO) from Pyrococcus horikoshii
分子名称: CALCIUM ION, CHLORIDE ION, Putative uncharacterized protein PH0242
著者Nyirenda, J, Matsumoto, S, Saitoh, T, Maita, N, Noda, N.N, Inagaki, F, Kohda, D.
登録日2012-06-13
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystallographic and NMR Evidence for Flexibility in Oligosaccharyltransferases and Its Catalytic Significance
Structure, 21, 2013
3UL6
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Saccharum officinarum canecystatin-1 in space group P6422
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Canecystatin-1
著者Valadares, N.F, Pereira, H.M, Oliveira-Silva, R, Garratt, R.C.
登録日2011-11-10
公開日2012-12-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献X-ray crystallography and NMR studies of domain-swapped canecystatin-1.
Febs J., 280, 2013
1ECU
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BU of 1ecu by Molmil
SOLUTION STRUCTURE OF E2F BINDING DNA FRAGMENT GCGCGAAAC-T-GTTTCGCGC
分子名称: DNA (5'-D(*GP*CP*GP*CP*GP*AP*AP*AP*CP*TP*GP*TP*TP*TP*CP*GP*CP*GP*C)-3')
著者Wu, J.H, Chang, C, Pei, J.M, Xiao, Q, Shi, Y.Y.
登録日2000-01-26
公開日2000-02-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of E2F binding DNA fragment GCGCGAAAC-T-GTTTCGCGC studied by Molecular Dynamics Simulation and Two Dimensional NMR experiment
to be published, 2000
1FLM
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DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
分子名称: FLAVIN MONONUCLEOTIDE, PROTEIN (FMN-BINDING PROTEIN)
著者Suto, K, Kawagoe, K, Shibata, N, Morimoto, K, Higuchi, Y, Kitamura, M, Nakaya, T, Yasuoka, N.
登録日1999-03-10
公開日2000-03-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献How do the x-ray structure and the NMR structure of FMN-binding protein differ?
Acta Crystallogr.,Sect.D, 56, 2000
6EOK
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Crystal structure of E. coli L-asparaginase II
分子名称: L-asparaginase 2, ZINC ION
著者Cerofolini, L, Giuntini, S, Carlon, A, Ravera, E, Calderone, V, Fragai, M, Parigi, G, Luchinat, C.
登録日2017-10-09
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization of PEGylated Asparaginase: New Opportunities from NMR Analysis of Large PEGylated Therapeutics.
Chemistry, 25, 2019
6FW4
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Protein-protein interactions and conformational changes : Importance of the hydrophobic cavity of TolA C-terminal domain
分子名称: TolA protein
著者Navarro, R, van Heijenoort, C, Bornet, O, Houot, L, Lloubes, R, Guerlesquin, F, Nouailler, M.
登録日2018-03-05
公開日2019-03-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Induced fit conformational changes of Vibrio cholerae TolAIII domain during the complex formation with the viral PIIIN1 domain: Structural and High-pressure NMR studies.
To Be Published
6GGY
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BU of 6ggy by Molmil
Paenibacillus sp. YM1 laminaribiose phosphorylase with sulphate bound
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Laminaribiose phosphorylase, ...
著者Kuhaudomlarp, S, Walpole, S, Stevenson, C.E.M, Nepogodiev, S.A, Lawson, D.M, Angulo, J, Field, R.A.
登録日2018-05-04
公開日2018-06-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unravelling the Specificity of Laminaribiose Phosphorylase from Paenibacillus sp. YM-1 towards Donor Substrates Glucose/Mannose 1-Phosphate by Using X-ray Crystallography and Saturation Transfer Difference NMR Spectroscopy.
Chembiochem, 20, 2019
6GH3
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Paenibacillus sp. YM1 laminaribiose phosphorylase with alpha-man-1-phosphate bound
分子名称: 1,2-ETHANEDIOL, 1-O-phosphono-alpha-D-mannopyranose, CHLORIDE ION, ...
著者Kuhaudomlarp, S, Walpole, S, Stevenson, C.E.M, Nepogodiev, S.A, Lawson, D.M, Angulo, J, Field, R.A.
登録日2018-05-04
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Unravelling the Specificity of Laminaribiose Phosphorylase from Paenibacillus sp. YM-1 towards Donor Substrates Glucose/Mannose 1-Phosphate by Using X-ray Crystallography and Saturation Transfer Difference NMR Spectroscopy.
Chembiochem, 20, 2019
1FYI
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BU of 1fyi by Molmil
11-MER DNA DUPLEX CONTAINING A 2'-DEOXYARISTEROMYCIN 8-OXO-GUANINE BASE PAIR;
分子名称: 5'-D(*CP*AP*GP*TP*GP*(2AR)P*GP*TP*CP*AP*C)-3', 5'-D(*GP*TP*GP*AP*CP*(8OG)P*CP*AP*CP*TP*G)-3'
著者Smirnov, S, Johnson, F, de los Santos, C.
登録日2000-09-30
公開日2000-10-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural NMR characterization of an 11-mer DNA Duplex Containing a 2'-deoxyaristeromycin 8-oxo-Guanine pair, nonhydrolyzable substrate analog for the DNA repair enzyme MutY
To be Published
6FVC
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BU of 6fvc by Molmil
Protein environment affects the water-tryptophan binding mode. Molecular dynamics simulations of Engrailed homeodomain mutants
分子名称: Segmentation polarity homeobox protein engrailed
著者Trosanova, Z, Zachrdla, M, Jansen, S, Srb, P, Zidek, L, Kozelka, J.
登録日2018-03-02
公開日2019-04-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein environment affects the water-tryptophan binding mode. MD, QM/MM, and NMR studies of engrailed homeodomain mutants.
Phys Chem Chem Phys, 20, 2018
5Z32
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BU of 5z32 by Molmil
LPS bound solution NMR structure of WS2-VR18
分子名称: VAL-ALA-ARG-GLY-TRP-GLY-ARG-LYS-CYS-PRO-LEU-PHE-GLY-LYS-ASN-LYS-SER-ARG
著者Bhunia, A, Mohid, S.A.
登録日2018-01-05
公開日2019-02-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Application of tungsten disulfide quantum dot-conjugated antimicrobial peptides in bio-imaging and antimicrobial therapy.
Colloids Surf B Biointerfaces, 176, 2019
5Z4B
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BU of 5z4b by Molmil
GB1 structure determination in living eukaryotic cells by in-cell NMR spectroscopy
分子名称: Protein LG
著者Tanaka, T, Teppei, I, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
登録日2018-01-10
公開日2019-01-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
6RJI
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BU of 6rji by Molmil
X-ray structure of the elongation factor P of S. aureus
分子名称: Elongation factor P
著者Fatkhullin, B.F, Golubev, A.A, Gabdulkhakov, A.G, Khusainov, I.S, Validov, S.Z, Usachev, K.S, Yusupova, G, Yusupov, M.M.
登録日2019-04-27
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.
Eur.Biophys.J., 49, 2020
6AK0
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BU of 6ak0 by Molmil
Solution NMR structure of a new lasso peptide specialicin
分子名称: CYS-LEU-GLY-VAL-GLY-SER-CYS-VAL-ASP-PHE-ALA-GLY-CYS-GLY-TYR-ALA-VAL-VAL-CYS-PHE-DTR
著者Hemmi, H, Kodani, S, Kaweewan, I, Komaki, H.
登録日2018-08-28
公開日2018-12-05
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Isolation and structure determination of a new lasso peptide specialicin based on genome mining
Bioorg. Med. Chem., 26, 2018
6ANN
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Structure of cyclic D-Leu-N-methyl-D-Phe-2-Abz-D-Ala at 0.76 Angstrom
分子名称: ETHANOL, cyclic DLE-ZAE-BE2-DAL
著者Cameron, A.J, Sarojini, V, Squire, C.J.
登録日2017-08-14
公開日2017-11-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.76 Å)
主引用文献Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides.
Chem Asian J, 12, 2017
6ANM
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Structure of D-Leu-D-Phe-2-Abz-D-Ala at 0.64 Angstrom
分子名称: DLE-DPN-BE2-DAL
著者Cameron, A.J, Sarojini, V, Squire, C.J.
登録日2017-08-14
公開日2017-11-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.64 Å)
主引用文献Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides.
Chem Asian J, 12, 2017
6RFK
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BU of 6rfk by Molmil
Crystal structure of EGRCK-inhibited Gla-domainless fIXa (K148Q, R150Q variant)
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Coagulation factor IX, ...
著者Huntington, J.A, Sendall, T.J.
登録日2019-04-15
公開日2019-06-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献NMR resonance assignments of apo and EGRCK-inhibited factor IXa
To Be Published
6CGW
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BU of 6cgw by Molmil
Solution NMR structure of JzTx-V, a Nav 1.7 inhibitory peptide
分子名称: Beta/kappa-theraphotoxin-Cg2a
著者Jordan, J.B, Andrews, K.
登録日2018-02-21
公開日2018-05-02
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Pharmacological characterization of potent and selective NaV1.7 inhibitors engineered from Chilobrachys jingzhao tarantula venom peptide JzTx-V.
PLoS ONE, 13, 2018
6CKV
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BU of 6ckv by Molmil
Solution NMR structure of human BOK
分子名称: Bcl-2-related ovarian killer protein
著者Grace, C.R, Zheng, J, Moldoveanu, T.
登録日2018-03-01
公開日2018-05-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Intrinsic Instability of BOK Enables Membrane Permeabilization in Apoptosis.
Cell Rep, 23, 2018
6CMY
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BU of 6cmy by Molmil
Solution NMR Structure Determination of Mouse Melanoregulin
分子名称: Melanoregulin
著者Rout, A.K, Wu, X, Strub, M.P, Starich, M.R, Hammer III, J.A, Tjandra, N.
登録日2018-03-06
公開日2018-09-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Structure of Melanoregulin Reveals a Role for Cholesterol Recognition in the Protein's Ability to Promote Dynein Function.
Structure, 26, 2018
1JV4
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BU of 1jv4 by Molmil
Crystal structure of recombinant major mouse urinary protein (rmup) at 1.75 A resolution
分子名称: 2-(SEC-BUTYL)THIAZOLE, CADMIUM ION, Major urinary protein 2
著者Kuser, P.R, Franzoni, L, Ferrari, E, Spisni, A, Polikarpov, I.
登録日2001-08-28
公開日2001-12-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The X-ray structure of a recombinant major urinary protein at 1.75 A resolution. A comparative study of X-ray and NMR-derived structures.
Acta Crystallogr.,Sect.D, 57, 2001
1LCC
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
分子名称: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
著者Chuprina, V.P, Rullmann, J.A.C, Lamerichs, R.M.J.N, Van Boom, J.H, Boelens, R, Kaptein, R.
登録日1993-03-25
公開日1994-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
1LCD
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
分子名称: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
著者Chuprina, V.P, Rullmann, J.A.C, Lamerichs, R.M.J.N, Van Boom, J.H, Boelens, R, Kaptein, R.
登録日1993-03-25
公開日1994-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
5JBS
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BU of 5jbs by Molmil
Conformational changes during monomer-to-dimer transition of Brucella suis VirB8
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Arya, T, Sharifahmadian, M, Sygusch, J, Baron, B.
登録日2016-04-13
公開日2017-03-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献NMR analyses, X-ray crystallography and small-molecule probing reveal conformational shifts during monomer-to-dimer transition of Brucella suis VirB8
To Be Published

222415

件を2024-07-10に公開中

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