PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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7NQD	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 分子名称: TPR_REGION domain-containing protein 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-03-01 公開日 2022-05-04 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.97 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
7NQF	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 with dsDNA 分子名称: COBALT (II) ION, DNA(CGTGDG), TPR_REGION domain-containing protein 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-03-01 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
7NQE	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 with dGTP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-03-01 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
6M4O	Cryo-EM structure of the monomeric SPT-ORMDL3 complex 分子名称: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ... 著者 Li, S.S, Xie, T, Wang, L, Gong, X. 登録日 2020-03-08 公開日 2021-02-10 最終更新日 2021-03-24 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex. Nat.Struct.Mol.Biol., 28, 2021
6M4N	Cryo-EM structure of the dimeric SPT-ORMDL3 complex 分子名称: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ... 著者 Li, S.S, Xie, T, Wang, L, Gong, X. 登録日 2020-03-07 公開日 2021-02-10 最終更新日 2021-03-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex. Nat.Struct.Mol.Biol., 28, 2021
5XZI	Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, AB5 分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ... 著者 Song, W.J, Tezcan, F.A. 登録日 2017-07-12 公開日 2017-12-20 最終更新日 2019-10-02 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases. J. Am. Chem. Soc., 139, 2017
8RU8	A crystal form of a human CDK2-CDK7 chimera 分子名称: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol, Cyclin-dependent kinase 2 著者 Mukherjee, M, Cleasby, A. 登録日 2024-01-30 公開日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Protein engineering enables a soakable crystal form of human CDK7 primed for high-throughput crystallography and structure-based drug design. Structure, 2024
5XZJ	Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, C96T/AB5 分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ... 著者 Song, W.J, Tezcan, F.A. 登録日 2017-07-12 公開日 2017-12-20 最終更新日 2022-03-23 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases. J. Am. Chem. Soc., 139, 2017
5JKM	Binary crystal structure of positively and negatively supercharged variants Ftn(pos) and Ftn(neg) from human heavy chain ferritin (Mg acetate condition) 分子名称: FE (III) ION, Ferritin heavy chain, GLYCEROL, ... 著者 Kuenzle, M, Beck, T. 登録日 2016-04-26 公開日 2016-10-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Binary Protein Crystals for the Assembly of Inorganic Nanoparticle Superlattices. J.Am.Chem.Soc., 138, 2016
5YKA	Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with cobalt(II) 分子名称: ACETATE ION, CHLORIDE ION, COBALT (II) ION, ... 著者 Chung, H.S, Pemble, C.W, Joo, S.H, Raetz, C.R. 登録日 2017-10-12 公開日 2018-09-05 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.448 Å) 主引用文献 Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol., 430, 2018
7P3H	Peptide HC02 - Lanthanide Selectivity Engineered into Structurally Characterized Designed Coiled Coils 分子名称: Peptide HC02, TERBIUM(III) ION, ZINC ION 著者 White, S.A, Peacock, A.F.A. 登録日 2021-07-07 公開日 2021-09-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Location-Dependent Lanthanide Selectivity Engineered into Structurally Characterized Designed Coiled Coils. Angew.Chem.Int.Ed.Engl., 60, 2021
4L5Y	Methylthioadenosine phosphorylase from Schistosoma mansoni in APO form 分子名称: PHOSPHATE ION, S-methyl-5'-thioadenosine phosphorylase 著者 Torini, J.R, DeMarco, R, Brandao-Neto, J, Pereira, H.M. 登録日 2013-06-11 公開日 2014-06-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.0957 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. Plos Negl Trop Dis, 10, 2016
5YVZ	Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and Fe(III) 分子名称: 2-OXOGLUTARIC ACID, ACETATE ION, FE (III) ION, ... 著者 Chung, H.S, Pemble, C.W, Joo, S.H, Raetz, C.R. 登録日 2017-11-28 公開日 2018-09-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol., 430, 2018
5K0X	Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2541 分子名称: (7S)-7-amino-N-[(4-fluorophenyl)methyl]-8-oxo-2,9,16,18,21-pentaazabicyclo[15.3.1]henicosa-1(21),17,19-triene-20-carboxamide, CHLORIDE ION, Tyrosine-protein kinase Mer 著者 McIver, A.L, Zhang, W, Liu, Q, Jiang, X, Stashko, M.A, Nichols, J, Miley, M.J, Norris-Drouin, J, Machius, M, DeRyckere, D, Wood, E, Graham, D.K, Earp, H.S, Kireev, D, Frye, S.V, Wang, X. 登録日 2016-05-17 公開日 2017-02-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.231 Å) 主引用文献 Discovery of Macrocyclic Pyrimidines as MerTK-Specific Inhibitors. ChemMedChem, 12, 2017
5K2E	Structure of NNQQNY from yeast prion Sup35 with zinc acetate determined by MicroED 分子名称: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION 著者 Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S. 登録日 2016-05-18 公開日 2016-09-14 最終更新日 2024-03-06 実験手法 ELECTRON CRYSTALLOGRAPHY (1 Å) 主引用文献 Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED. Proc.Natl.Acad.Sci.USA, 113, 2016
6NEF	Outer Membrane Cytochrome S Filament from Geobacter Sulfurreducens 分子名称: C-type cytochrome OmcS, HEME C, MAGNESIUM ION 著者 Filman, D.J, Marino, S.F, Ward, J.E, Yang, L, Mester, Z, Bullitt, E, Lovley, D.R, Strauss, M. 登録日 2018-12-17 公開日 2019-07-03 最終更新日 2019-09-11 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire. Commun Biol, 2, 2019
5ZKK	Crystal structure of Phosphoserine phosphatase from Entamoeba histolytica 分子名称: BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Kumari, P, Gourinath, S. 登録日 2018-03-24 公開日 2019-04-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and functional characterisation of phosphoserine phosphatase, that plays critical role in the oxidative stress response in the parasite Entamoeba histolytica. J.Struct.Biol., 206, 2019
6NNR	high-resolution structure of wild-type E. coli thymidylate synthase 分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-deoxy-5'-uridylic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Stroud, R.M, Finer-Moore, J. 登録日 2019-01-15 公開日 2019-01-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Mg2+ binds to the surface of thymidylate synthase and affects hydride transfer at the interior active site. J. Am. Chem. Soc., 135, 2013
5K2G	Structure of GNNQQNY from yeast prion Sup35 in space group P21 determined by MicroED 分子名称: Eukaryotic peptide chain release factor GTP-binding subunit 著者 Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S. 登録日 2016-05-18 公開日 2016-09-14 最終更新日 2024-03-06 実験手法 ELECTRON CRYSTALLOGRAPHY (1.1 Å) 主引用文献 Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED. Proc.Natl.Acad.Sci.USA, 113, 2016
7P9J	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 - Primer Initiation Complex 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, COBALT (II) ION, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-07-27 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
5MHH	Crystal structure of engineered human lipocalin 2 carrying p-boronophenylalanine at position 36 分子名称: Neutrophil gelatinase-associated lipocalin, SULFATE ION 著者 Skerra, A, Eichinger, A. 登録日 2016-11-24 公開日 2017-10-11 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Rational Design of an Anticalin-Type Sugar-Binding Protein Using a Genetically Encoded Boronate Side Chain. ACS Synth Biol, 6, 2017
7OPB	IL7R in complex with an antagonist 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IL7R binder, ... 著者 Markovic, I, Verschueren, K.H.G, Verstraete, K, Savvides, S.N. 登録日 2021-05-31 公開日 2022-05-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.144 Å) 主引用文献 Design of protein-binding proteins from the target structure alone. Nature, 605, 2022
5WRC	Crystal structure of proteinase K from Engyodontium album 分子名称: NITRATE ION, PRASEODYMIUM ION, Proteinase K 著者 Sugahara, M, Nakane, T, Suzuki, M, Masuda, T, Inoue, S, Numata, K. 登録日 2016-12-01 公開日 2017-11-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Hydroxyethyl cellulose matrix applied to serial crystallography Sci Rep, 7, 2017
5Z1O	Crystal structure of an OspA mutant 分子名称: Outer Surface Protein A 著者 Takada, S, Makabe, K. 登録日 2017-12-27 公開日 2019-01-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of an OspA mutant. To Be Published
7OVO	Heterodimeric murine tRNA-guanine transglycosylase in complex with queuine 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, Queuine tRNA-ribosyltransferase accessory subunit 2, ... 著者 Sebastiani, M, Heine, A, Reuter, K. 登録日 2021-06-15 公開日 2022-06-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and Biochemical Investigation of the Heterodimeric Murine tRNA-Guanine Transglycosylase. Acs Chem.Biol., 17, 2022

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