PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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8QLG	Crystal structure of the pneumococcal Substrate-binding protein AliD in closed conformation in complex with Peptide 1 分子名称: AliD, Peptide 1, ZINC ION 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-19 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLV	Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 4 分子名称: Oligopeptide-binding protein AliB, VAL-MET-VAL-LYS-GLY-PRO-GLY-PRO-GLY-ARG 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-20 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLC	Crystal structure of the pneumococcal Substrate-binding protein AliD in open conformation 分子名称: AliD, MAGNESIUM ION 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-19 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLH	Crystal structure of the pneumococcal Substrate-binding protein AliC as a domain-swapped dimer 分子名称: AliC 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-19 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLK	Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 2 分子名称: ALA-ILE-GLN-SER-GLU-LYS-ALA-ARG-LYS-HIS-ASN, Oligopeptide-binding protein AliB 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-20 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLJ	Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with an unknown peptide 分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, Oligopeptide-binding protein AliB 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-20 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
8QLM	Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 3 分子名称: Oligopeptide-binding protein AliB, PRO-ILE-VAL-GLY-GLY-HIS-GLU-GLY-ALA-GLY-VAL 著者 Alcorlo, M, Abdullah, M.R, Hammerschmidt, S, Hermoso, J. 登録日 2023-09-20 公開日 2024-05-22 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci. Plos Pathog., 20, 2024
2O6N	RH4B: designed right-handed coiled coil tetramer with all biological amino acids 分子名称: RH4B designed peptide, YTTERBIUM (II) ION 著者 Sales, M, Alber, T. 登録日 2006-12-07 公開日 2007-10-23 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Structure of a designed, right-handed coiled-coil tetramer containing all biological amino acids. Protein Sci., 16, 2007
8EZG	Monobody 12D1 bound to KRAS(G12D) 分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S. 登録日 2022-10-31 公開日 2023-07-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc.Natl.Acad.Sci.USA, 120, 2023
8F0M	Monobody 12D5 bound to KRAS(G12D) 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ... 著者 Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S. 登録日 2022-11-03 公開日 2023-07-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc.Natl.Acad.Sci.USA, 120, 2023
1LP6	Crystal structure of orotidine monophosphate decarboxylase complexed with CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, orotidine monophosphate decarboxylase 著者 Wu, N, Pai, E.F. 登録日 2002-05-07 公開日 2002-08-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase. J.Biol.Chem., 277, 2002
6QXH	Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Pozzi, C, Mangani, M. 登録日 2019-03-07 公開日 2019-04-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities. Molecules, 24, 2019
6QXG	Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with FdUMP 分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, SULFATE ION, Thymidylate synthase 著者 Pozzi, C, Mangani, M. 登録日 2019-03-07 公開日 2019-04-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities. Molecules, 24, 2019
6QXS	Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with FdUMP 分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ... 著者 Pozzi, C, Mangani, M. 登録日 2019-03-07 公開日 2019-04-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities. Molecules, 24, 2019
6QYA	Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with dUMP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, ... 著者 Pozzi, C, Mangani, M. 登録日 2019-03-08 公開日 2019-04-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities. Molecules, 24, 2019
6RBK	Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in extended state, 3-fold symmetrised 分子名称: Afp7, Afp8 著者 Desfosses, A. 登録日 2019-04-10 公開日 2019-04-24 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Atomic structures of an entire contractile injection system in both the extended and contracted states. Nat Microbiol, 4, 2019
6RBN	Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath-tube complex in extended state 分子名称: Afp1, Afp2, Afp3 著者 Desfosses, A. 登録日 2019-04-11 公開日 2019-04-24 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Atomic structures of an entire contractile injection system in both the extended and contracted states. Nat Microbiol, 4, 2019
1LOL	Crystal structure of orotidine monophosphate decarboxylase complex with XMP 分子名称: 1,3-BUTANEDIOL, XANTHOSINE-5'-MONOPHOSPHATE, orotidine 5'-monophosphate decarboxylase 著者 Wu, N, Pai, E.F. 登録日 2002-05-06 公開日 2002-08-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase. J.Biol.Chem., 277, 2002
8EJA	Computational design of potent and selective inhibitors of Bak and Bax 分子名称: aBAK 著者 Bera, A.K, Berger, S.A, Baker, D. 登録日 2022-09-16 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Computational design of potent and selective inhibitors of Bak and Bax To Be Published
2Q33	Crystal structure of all-D monellin at 1.8 A resolution 分子名称: D-MONELLIN CHAIN A, D-MONELLIN CHAIN B 著者 Hung, L.-W, Kohmura, M, Ariyoshi, Y, Kim, S.-H. 登録日 2007-05-29 公開日 2007-11-13 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of an Enantiomeric Protein, D-Monellin at 1.8 A Resolution. Acta Crystallogr.,Sect.D, 54, 1998
2P05	Structural Insights into the Evolution of a Non-Biological Protein 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ... 著者 Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C. 登録日 2007-02-28 公開日 2007-06-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization. PLoS ONE, 2, 2007
1HKA	6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE 分子名称: 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE 著者 Xiao, B, Shi, G, Chen, X, Yan, H, Ji, X. 登録日 1998-09-29 公開日 1999-06-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, a potential target for the development of novel antimicrobial agents. Structure Fold.Des., 7, 1999
1KD8	X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12Ia16V BASE-d12La16L 分子名称: GCN4 ACID BASE HETERODIMER ACID-d12Ia16V, GCN4 ACID BASE HETERODIMER BASE-d12La16L 著者 Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S. 登録日 2001-11-12 公開日 2001-11-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils. Proc.Natl.Acad.Sci.USA, 98, 2001
1KD9	X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12La16L BASE-d12La16L 分子名称: GCN4 ACID BASE HETERODIMER ACID-d12La16L, GCN4 ACID BASE HETERODIMER BASE-d12La16L 著者 Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S. 登録日 2001-11-12 公開日 2001-11-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils. Proc.Natl.Acad.Sci.USA, 98, 2001
1KDD	X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L 分子名称: GCN4 ACID BASE HETERODIMER ACID-d12La16I, GCN4 ACID BASE HETERODIMER BASE-d12La16L 著者 Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S. 登録日 2001-11-12 公開日 2001-11-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils. Proc.Natl.Acad.Sci.USA, 98, 2001

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