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5KAY
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BU of 5kay by Molmil
Structure of Spelter bound to Zn2+
分子名称: SODIUM ION, Spelter, ZINC ION
著者Guffy, S.L, Der, B.S, Kuhlman, B.
登録日2016-06-02
公開日2016-08-03
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Probing the minimal determinants of zinc binding with computational protein design.
Protein Eng.Des.Sel., 29, 2016
6KZM
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BU of 6kzm by Molmil
GluK3 receptor complex with kainate
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumar, J, Kumari, J, Burada, A.P.
登録日2019-09-24
公開日2020-03-04
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
6L6F
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BU of 6l6f by Molmil
GluK3 receptor complex with UBP301
分子名称: Glutamate receptor ionotropic, kainate 3
著者Kumar, J, Kumari, J, Burada, A.P.
登録日2019-10-28
公開日2020-03-04
実験手法ELECTRON MICROSCOPY (10.6 Å)
主引用文献Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
8F2F
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BU of 8f2f by Molmil
NMR solution structure of lambda-MeuKTx-1
分子名称: Neurotoxin lambda-MeuTx
著者Harvey, P.J, Craik, D.J.
登録日2022-11-07
公開日2022-11-23
実験手法SOLUTION NMR
主引用文献Functional evolution of scorpion venom peptides with an inhibitor cystine knot fold.
Biosci Rep, 33, 2013
7JY9
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BU of 7jy9 by Molmil
Structure of a 9 base pair RecA-D loop complex
分子名称: DNA (27-MER), DNA (42-MER), MAGNESIUM ION, ...
著者Pavletich, N.P.
登録日2020-08-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
7JY6
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BU of 7jy6 by Molmil
Analysis of a strand exchange reaction with a mini filament of 9-RecA, oligo(dT)27 primary ssDNA, non-homologous 120 bp dsDNA and ATPgammaS
分子名称: DNA (27-MER), DNA (45-MER), MAGNESIUM ION, ...
著者Pavletich, N.P.
登録日2020-08-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
7JY8
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BU of 7jy8 by Molmil
Analysis of a strand exchange reaction with a mini filament of 9-RecA, 27-mer ssDNA, partially-homologous 67 bp dsDNA and ATPgammaS
分子名称: DNA (27-MER), DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), MAGNESIUM ION, ...
著者Pavletich, N.P.
登録日2020-08-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
8B8H
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BU of 8b8h by Molmil
Structure of DCS-resistant variant D322N of alanine racemase from M. tuberculosis in complex with DCS
分子名称: (~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium, 1,2-ETHANEDIOL, Alanine racemase, ...
著者de Chiara, C, Prosser, G, Ogrodowicz, R.W, de Carvalho, L.P.S.
登録日2022-10-04
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of the d-Cycloserine-Resistant Variant D322N of Alanine Racemase from Mycobacterium tuberculosis .
Acs Bio Med Chem Au, 3, 2023
7JY7
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BU of 7jy7 by Molmil
Structure of a 12 base pair RecA-D loop complex
分子名称: DNA (27-MER), DNA (48-MER), MAGNESIUM ION, ...
著者Pavletich, N.P.
登録日2020-08-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
4ZMK
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BU of 4zmk by Molmil
Crystal structure of the dimerization domain of S. pombe Taz1
分子名称: Telomere length regulator taz1
著者Deng, W, Wu, J, Wang, F, Lei, M.
登録日2015-05-04
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fission yeast telomere-binding protein Taz1 is a functional but not a structural counterpart of human TRF1 and TRF2.
Cell Res., 25, 2015
5H8F
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BU of 5h8f by Molmil
Structure of the apo human GluN1/GluN2A LBD
分子名称: GLUTAMIC ACID, GLYCEROL, GLYCINE, ...
著者Wallweber, H.J.A, Lupardus, P.J.
登録日2015-12-23
公開日2016-02-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Positive Allosteric Modulators of GluN2A-Containing NMDARs with Distinct Modes of Action and Impacts on Circuit Function.
Neuron, 89, 2016
4ZMI
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BU of 4zmi by Molmil
Crystal structure of the Helical domain of S. pombe Taz1
分子名称: COBALT (II) ION, MAGNESIUM ION, Telomere length regulator taz1
著者Deng, W, Wu, J, Wang, F, Lei, M.
登録日2015-05-04
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Fission yeast telomere-binding protein Taz1 is a functional but not a structural counterpart of human TRF1 and TRF2.
Cell Res., 25, 2015
9FHP
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BU of 9fhp by Molmil
CryoEM structure of wild-type Turnip Yellows Virus
分子名称: Minor capsid readthrough protein
著者Trapani, S, Lai Kee Him, J, Hoh, F, Brault, V, Bron, P.
登録日2024-05-28
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献CryoEM structure of wild-type Turnip Yellows Virus
To Be Published
9B37
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BU of 9b37 by Molmil
Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one concanavalin A dimer. Composite map.
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
登録日2024-03-18
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (6.66 Å)
主引用文献Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
9B36
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BU of 9b36 by Molmil
Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two concanavalin A dimers. Composite map.
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
登録日2024-03-18
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
9B38
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BU of 9b38 by Molmil
Kainate receptor GluK2 in complex with agonist glutamate with pseudo 4-fold symmetrical ligand-binding domain layer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
登録日2024-03-18
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
9B39
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BU of 9b39 by Molmil
Kainate receptor GluK2 in complex with agonist glutamate with asymmetric ligand-binding domain layer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
登録日2024-03-18
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
9B35
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BU of 9b35 by Molmil
Ligand-binding and transmembrane domains of kainate receptor GluK2 in the open state, a complex with agonist glutamate and positive allosteric modulator BPAM344
分子名称: GLUTAMIC ACID, Glutamate receptor ionotropic, kainate 2
著者Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
登録日2024-03-18
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
5EE1
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BU of 5ee1 by Molmil
Crystal structure of OsYchF1 at pH 7.85
分子名称: Obg-like ATPase 1
著者Li, X, Chen, Z.
登録日2015-10-22
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses
Proc.Natl.Acad.Sci.USA, 113, 2016
5EE0
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BU of 5ee0 by Molmil
Crystal structure of OsYchF1 at pH 6.5
分子名称: Obg-like ATPase 1
著者Li, X, Chen, Z.
登録日2015-10-22
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses
Proc.Natl.Acad.Sci.USA, 113, 2016
8G4C
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BU of 8g4c by Molmil
BceABS ATPgS high res TM
分子名称: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者George, N.L, Orlando, B.J.
登録日2023-02-09
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Architecture of a complete Bce-type antimicrobial peptide resistance module.
Nat Commun, 14, 2023
8G4D
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BU of 8g4d by Molmil
BceABS ATPgS tilted BceS
分子名称: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者George, N.L, Orlando, B.J.
登録日2023-02-09
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Architecture of a complete Bce-type antimicrobial peptide resistance module.
Nat Commun, 14, 2023
5MQP
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BU of 5mqp by Molmil
Glycoside hydrolase BT_1002
分子名称: CALCIUM ION, Glycoside hydrolase BT_1002
著者Basle, A, Ndeh, D, Rogowski, A, Cartmell, A, Luis, A.S, Venditto, I, Labourel, A, Gilbert, H.J.
登録日2016-12-20
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The most complex carbohydrate known is degraded in the human gut by single organisms and not bacterial consortia
To Be Published
6QLT
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BU of 6qlt by Molmil
Galectin-3C in complex with fluoroaryltriazole monothiogalactoside derivative-7
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-(2-fluorophenyl)-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, DI(HYDROXYETHYL)ETHER, Galectin-3
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019
6QLO
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BU of 6qlo by Molmil
Galectin-3C in complex with substituted fluoroaryltriazole monothiogalactoside derivative 1
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[3,4-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, CHLORIDE ION, Galectin-3
著者Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
登録日2019-02-01
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Chemmedchem, 14, 2019

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件を2024-09-25に公開中

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