Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7UX6
DownloadVisualize
BU of 7ux6 by Molmil
Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.35 A resolution (P212121 - form I)
分子名称: MfnG, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN LIGAND
著者Miller, M.D, Wu, K.-L, Xu, W, Xiao, H, Philips Jr, G.N.
登録日2022-05-05
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.
Protein Sci., 31, 2022
5JHZ
DownloadVisualize
BU of 5jhz by Molmil
Crystal Structure of Fungal MagKatG2 at pH 7.0
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Gasselhuber, B, Obinger, C, Carpena, X.
登録日2016-04-21
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Interaction with the Redox Cofactor MYW and Functional Role of a Mobile Arginine in Eukaryotic Catalase-Peroxidase.
Biochemistry, 55, 2016
8V7G
DownloadVisualize
BU of 8v7g by Molmil
Human DNA polymerase eta-DNA-gemC-ended primer-dAMPNPP ternary complex with Mg2+
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*(U7B))-3'), DNA (5'-D(*CP*AP*TP*TP*GP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Chang, C, Gao, Y.
登録日2023-12-04
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mn2+
To Be Published
4R54
DownloadVisualize
BU of 4r54 by Molmil
Complex crystal structure of sp-Aspartate-Semialdehyde-Dehydrogenase with 3-carboxy-ethyl-phthalic acid
分子名称: 3-(2-carboxyethyl)benzene-1,2-dicarboxylic acid, ACETATE ION, Aspartate-semialdehyde dehydrogenase, ...
著者Pavlovsky, A.G, Viola, R.E.
登録日2014-08-20
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献A cautionary tale of structure-guided inhibitor development against an essential enzyme in the aspartate-biosynthetic pathway.
Acta Crystallogr.,Sect.D, 70, 2014
4FVT
DownloadVisualize
BU of 4fvt by Molmil
Human SIRT3 bound to Ac-ACS peptide and Carba-NAD
分子名称: Acetylated ACS2 peptide, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, ...
著者Dai, H.
登録日2012-06-29
公開日2012-08-15
最終更新日2012-09-19
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5.
J.Org.Chem., 77, 2012
8VAN
DownloadVisualize
BU of 8van by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in an Initial-Binding conformation
分子名称: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ...
著者Landeck, J.T, Pajak, J, Kelch, B.A.
登録日2023-12-11
公開日2024-03-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
7UI2
DownloadVisualize
BU of 7ui2 by Molmil
The crystal structure of 15kDa Phlebotomus papatasi salivary protein Ppsp15.
分子名称: ACETATE ION, SP15 protein
著者Tolbert, W.D, Pazgier, M.
登録日2022-03-28
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献The crystal structure of 15kDa Phlebotomus papatasi salivary protein Ppsp15.
To Be Published
4G1C
DownloadVisualize
BU of 4g1c by Molmil
Human SIRT5 bound to Succ-IDH2 and Carba-NAD
分子名称: CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
著者Dai, H.
登録日2012-07-10
公開日2012-08-15
最終更新日2012-09-19
実験手法X-RAY DIFFRACTION (1.944 Å)
主引用文献Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5.
J.Org.Chem., 77, 2012
3JC7
DownloadVisualize
BU of 3jc7 by Molmil
Structure of the eukaryotic replicative CMG helicase and pumpjack motion
分子名称: Cell division control protein 45, DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, ...
著者Li, H, Bai, L, Yuan, Z, Sun, J, Georgescu, R.E, Liu, J, O'Donnell, M.E.
登録日2015-11-24
公開日2016-02-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of the eukaryotic replicative CMG helicase suggests a pumpjack motion for translocation.
Nat.Struct.Mol.Biol., 23, 2016
7U3R
DownloadVisualize
BU of 7u3r by Molmil
[2T7+10] Self-assembling tensegrity triangle with two turns of DNA and the sticky end attachment of a one-turn linker per axis, with R3 symmetry
分子名称: DNA (5'-D(*AP*CP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*GP*AP*TP*GP*CP*TP*GP*AP*GP*T)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3'), ...
著者Woloszyn, K, Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (6.27 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3Y
DownloadVisualize
BU of 7u3y by Molmil
[L233] Self-assembling tensegrity triangle with two turns, three turns and three turns of DNA per axis by linker addition with P1 symmetry
分子名称: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), DNA (5'-D(*AP*GP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (6.06 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3P
DownloadVisualize
BU of 7u3p by Molmil
[3T7] Self-assembling tensegrity triangle with three turns of DNA per axis with R3 symmetry
分子名称: DNA (31-MER), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), DNA (5'-D(P*GP*GP*CP*TP*GP*C)-3'), ...
著者Woloszyn, K, Vecchioni, S, Lu, B, Ma, Y, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (6.06 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3S
DownloadVisualize
BU of 7u3s by Molmil
[2T7+21] Self-assembling tensegrity triangle with two turns of DNA and the sticky end addition of a two-turn linker per axis with R3 symmetry
分子名称: DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), DNA (5'-D(P*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*GP*AP*TP*GP*CP*TP*GP*AP*CP*GP*TP*AP*GP*TP*AP*GP*CP*AP*GP*AP*G)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (9.5 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3T
DownloadVisualize
BU of 7u3t by Molmil
[F223] Self-assembling tensegrity triangle with two turns, two turns and three turns of DNA per axis by extension with P1 symmetry
分子名称: DNA (31-MER), DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P, Zhu, E.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (4.69 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3O
DownloadVisualize
BU of 7u3o by Molmil
[a2T7] Self-assembling asymmetric tensegrity triangle with P1 symmetry
分子名称: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3'), DNA (5'-D(*GP*AP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U3U
DownloadVisualize
BU of 7u3u by Molmil
[L223] Self-assembling tensegrity triangle with two turns, two turns and three turns of DNA per axis by linker addition with P1 symmetry
分子名称: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*TP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*CP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (4.46 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7NLV
DownloadVisualize
BU of 7nlv by Molmil
WILDTYPE CORE-STREPTAVIDIN WITH a conjugated BIOTINYLATED PYRROLIDINE II
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, Streptavidin
著者Nodling, A.R, Santi, N, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2021-02-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
8IZF
DownloadVisualize
BU of 8izf by Molmil
Cryo-EM structure of the Lac1-Lip1 (Lip1-S74F) complex
分子名称: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, Ceramide synthase LAC1, Ceramide synthase subunit LIP1
著者Xie, T, Fang, Q, Gong, X.
登録日2023-04-07
公開日2023-12-13
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Structure and mechanism of a eukaryotic ceramide synthase complex.
Embo J., 42, 2023
1H64
DownloadVisualize
BU of 1h64 by Molmil
CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER
分子名称: SNRNP SM-LIKE PROTEIN
著者Mayer, C, Weeks, S, Suck, D.
登録日2001-06-05
公開日2002-12-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of the Pyrococcus Abyssi Sm Core and its Complex with RNA.Common Features of RNA Binding in Archaea and Eukarya
J.Biol.Chem., 278, 2003
7NA5
DownloadVisualize
BU of 7na5 by Molmil
Structure of the H2DB-TCR ternary complex with HSF2 melanoma neoantigen
分子名称: 47BE7 TCR alpha chain, 47BE7 TCR beta chain, Beta-2-microglobulin, ...
著者Patskovsky, Y, Finnigan, J, Patskovska, L, Newman, J, Bhardwaj, N, Krogsgaard, M.
登録日2021-06-19
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the TCR-H2DB ternary complex with melanoma HSF2 neoantigen YGFRNVVHI
To be Published
3JC5
DownloadVisualize
BU of 3jc5 by Molmil
Structure of the eukaryotic replicative CMG helicase and pumpjack motion
分子名称: Cell division control protein 45, DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, ...
著者Li, H, Bai, L, Yuan, Z, Sun, J, Georgescu, R.E, Liu, J, O'Donnell, M.E.
登録日2015-11-24
公開日2016-02-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structure of the eukaryotic replicative CMG helicase suggests a pumpjack motion for translocation.
Nat.Struct.Mol.Biol., 23, 2016
7U3X
DownloadVisualize
BU of 7u3x by Molmil
[F233] Self-assembling tensegrity triangle with two turns, three turns and three turns of DNA per axis by extension with P1 symmetry
分子名称: DNA (31-MER), DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*TP*CP*TP*AP*GP*CP*AP*TP*AP*GP*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (5.68 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U40
DownloadVisualize
BU of 7u40 by Molmil
[L244] Self-assembling tensegrity triangle with two turns, four turns and four turns of DNA per axis by linker addition with P1 symmetry
分子名称: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*TP*TP*AP*GP*TP*CP*GP*TP*GP*GP*CP*TP*CP*G)-3'), DNA (5'-D(P*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (7.55 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7U44
DownloadVisualize
BU of 7u44 by Molmil
[F344] Self-assembling tensegrity triangle with three turns, four turns and four turns of DNA per axis by extension with P1 symmetry
分子名称: DNA (31-MER), DNA (35-MER), DNA (42-MER), ...
著者Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
登録日2022-02-28
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (8.46 Å)
主引用文献Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants.
Adv Mater, 34, 2022
7TX8
DownloadVisualize
BU of 7tx8 by Molmil
Long form D7 protein from Anopheles darlingi with U46619 and serotonin bound
分子名称: (5Z)-7-{(1R,4S,5S,6R)-6-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-2-oxabicyclo[2.2.1]hept-5-yl}hept-5-enoic acid, Long form D7 salivary protein, SEROTONIN
著者Andersen, J.F, Alvarenga, P.H.
登録日2022-02-08
公開日2022-06-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Functional aspects of evolution in a cluster of salivary protein genes from mosquitoes.
Insect Biochem.Mol.Biol., 146, 2022

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon