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4WZJ
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BU of 4wzj by Molmil
Spliceosomal U4 snRNP core domain
分子名称: Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, ...
著者Leung, A.K.W, Nagai, K, Li, J.
登録日2014-11-19
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of the spliceosomal U4 snRNP core domain and its implication for snRNP biogenesis.
Nature, 473, 2011
4Q0B
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BU of 4q0b by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with gap-RNA/DNA and Nevirapine
分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3', 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*G)-3', ...
著者Das, K, Martinez, S.E, Arnold, E.
登録日2014-04-01
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.
Nucleic Acids Res., 42, 2014
4PWD
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Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine
分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3', 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*U)-3', ...
著者Das, K, Martinez, S.E, Arnold, E.
登録日2014-03-19
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.
Nucleic Acids Res., 42, 2014
7T19
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Rev1 Ternary Complex with dGTP and Ca2+
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2021-12-01
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1.
Nat Commun, 13, 2022
7T1B
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BU of 7t1b by Molmil
Rev1 Ternary Complex with rCTP and Ca2+
分子名称: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2021-12-01
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1.
Nat Commun, 13, 2022
7T18
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BU of 7t18 by Molmil
Rev1 Ternary Complex with dTTP and Ca2+
分子名称: CALCIUM ION, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*G)-3'), ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2021-12-01
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1.
Nat Commun, 13, 2022
7T1A
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Rev1 Ternary Complex with dATP and Ca2+
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2021-12-01
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1.
Nat Commun, 13, 2022
4PUO
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BU of 4puo by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine
分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3', 5'-R(P*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3', ...
著者Das, K, Martinez, S.E, Arnold, E.
登録日2014-03-13
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.
Nucleic Acids Res., 42, 2014
4W9S
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BU of 4w9s by Molmil
2-(4-(1H-tetrazol-5-yl)phenyl)-5-hydroxypyrimidin-4(3H)-one bound to influenza 2009 H1N1 endonuclease
分子名称: 5-hydroxy-2-[4-(1H-tetrazol-5-yl)phenyl]pyrimidin-4(3H)-one, MANGANESE (II) ION, Polymerase acidic protein, ...
著者Bauman, J.D, Patel, D, Das, K, Arnold, E.
登録日2014-08-27
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Phenyl Substituted 4-Hydroxypyridazin-3(2H)-ones and 5-Hydroxypyrimidin-4(3H)-ones: Inhibitors of Influenza A Endonuclease.
J.Med.Chem., 57, 2014
5M2X
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BU of 5m2x by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.991 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
5M2Z
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BU of 5m2z by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.8 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
4UCI
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BU of 4uci by Molmil
X-ray structure and activities of an essential Mononegavirales L- protein domain
分子名称: ADENOSINE, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Paesen, G.C, Collet, A, Sallamand, C, Debart, F, Vasseur, J.J, Canard, B, Decroly, E, Grimes, J.M.
登録日2014-12-03
公開日2015-10-14
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献X-Ray Structure and Activities of an Essential Mononegavirales L-Protein Domain.
Nat.Commun., 6, 2015
4R6E
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BU of 4r6e by Molmil
Human artd1 (parp1) - catalytic domain in complex with inhibitor niraparib
分子名称: 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide, GLYCEROL, Poly [ADP-ribose] polymerase 1, ...
著者Karlberg, T, Thorsell, A.G, Brock, J, Schuler, H.
登録日2014-08-25
公開日2015-09-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Potency and Promiscuity in Poly(ADP-ribose) Polymerase (PARP) and Tankyrase Inhibitors.
J.Med.Chem., 60, 2017
5ZYA
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BU of 5zya by Molmil
SF3b spliceosomal complex bound to E7107
分子名称: PHD finger-like domain-containing protein 5A, POTASSIUM ION, Splicing factor 3B subunit 1, ...
著者Finci, L.I, Larsen, N.A.
登録日2018-05-23
公開日2018-06-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.95 Å)
主引用文献The cryo-EM structure of the SF3b spliceosome complex bound to a splicing modulator reveals a pre-mRNA substrate competitive mechanism of action
Genes Dev., 32, 2018
7OZV
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BU of 7ozv by Molmil
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
分子名称: Non-structural protein 7, Non-structural protein 8, Product RNA, ...
著者Kabinger, F, Stiller, C, Schmitzova, J, Dienemann, C, Kokic, G, Hillen, H.S, Hoebartner, C, Cramer, P.
登録日2021-06-28
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis.
Nat.Struct.Mol.Biol., 28, 2021
7OZU
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BU of 7ozu by Molmil
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
分子名称: Non-structural protein 7, Non-structural protein 8, Product RNA, ...
著者Kabinger, F, Stiller, C, Schmitzova, J, Dienemann, C, Kokic, G, Hillen, H.S, Hoebartner, C, Cramer, P.
登録日2021-06-28
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis.
Nat.Struct.Mol.Biol., 28, 2021
4PQU
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BU of 4pqu by Molmil
Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3', ...
著者Das, K, Bandwar, R.P, Arnold, E.
登録日2014-03-04
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.508 Å)
主引用文献Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.
Nucleic Acids Res., 42, 2014
6NUS
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BU of 6nus by Molmil
SARS-Coronavirus NSP12 bound to NSP8 co-factor
分子名称: NSP12, NSP8, ZINC ION
著者Kirchdoerfer, R.N, Ward, A.B.
登録日2019-02-01
公開日2019-05-29
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors.
Nat Commun, 10, 2019
6NUR
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BU of 6nur by Molmil
SARS-Coronavirus NSP12 bound to NSP7 and NSP8 co-factors
分子名称: NSP12, NSP7, NSP8, ...
著者Kirchdoerfer, R.N, Ward, A.B.
登録日2019-02-01
公開日2019-05-29
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors.
Nat Commun, 10, 2019
4UCZ
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BU of 4ucz by Molmil
X-ray structure and activities of an essential Mononegavirales L- protein domain
分子名称: GUANOSINE, GUANOSINE-5'-TRIPHOSPHATE, RNA-DIRECTED RNA POLYMERASE L, ...
著者Paesen, G.C, Collet, A, Sallamand, C, Debart, F, Vasseur, J.J, Canard, B, Decroly, E, Grimes, J.M.
登録日2014-12-05
公開日2015-11-18
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献X-Ray Structure and Activities of an Essential Mononegavirales L-Protein Domain.
Nat.Commun., 6, 2015
8IGR
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BU of 8igr by Molmil
Cryo-EM structure of CII-dependent transcription activation complex
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zhao, M, Gao, B, Wen, A, Feng, Y, Lu, Y.
登録日2023-02-21
公開日2023-05-17
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of lambda CII-dependent transcription activation.
Structure, 31, 2023
8VRJ
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BU of 8vrj by Molmil
Rigid body fitted model for gamma tubulin ring complex capped microtubule
分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
著者Aher, A, Urnavicius, L, Kapoor, T.M.
登録日2024-01-22
公開日2024-03-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8VRK
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BU of 8vrk by Molmil
Rigid body fitted model for refined density map of gamma tubulin ring complex capped microtubule
分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
著者Aher, A, Urnavicius, L, Kapoor, T.M.
登録日2024-01-22
公開日2024-03-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
7C97
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BU of 7c97 by Molmil
Cryo-EM structure of an Escherichia coli RNAP-promoter open complex (RPo) with SspA
分子名称: DNA (63-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lin, W, Feng, Y.
登録日2020-06-05
公開日2020-08-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structural basis for transcription inhibition by E. coli SspA
Nucleic Acids Res., 2020
7CHW
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BU of 7chw by Molmil
Cryo-EM structure of an Escherichia coli RNAP-promoter open complex (RPo)
分子名称: DNA (63-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lin, W, Feng, Y.
登録日2020-07-06
公開日2020-08-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural basis for transcription inhibition by E. coli SspA
Nucleic Acids Res., 2020

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