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7SUC
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BU of 7suc by Molmil
XFEL Serial Crystallography Reveals the Room Temperature Structure of Methyl-Coenzyme M Reductase
分子名称: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, ACETATE ION, ...
著者Ohmer, C.J, Dasgupta, M.
登録日2021-11-16
公開日2022-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献XFEL serial crystallography reveals the room temperature structure of methyl-coenzyme M reductase.
J.Inorg.Biochem., 230, 2022
5JFB
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BU of 5jfb by Molmil
Crystal structure of the scavenger receptor cysteine-rich domain 5 (SRCR5) from porcine CD163
分子名称: Scavenger receptor cysteine-rich type 1 protein M130
著者Ma, H, Jiang, L, Qiao, S, Zhang, G, Li, R.
登録日2016-04-19
公開日2017-03-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of the Fifth Scavenger Receptor Cysteine-Rich Domain of Porcine CD163 Reveals an Important Residue Involved in Porcine Reproductive and Respiratory Syndrome Virus Infection
J. Virol., 91, 2017
6W67
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BU of 6w67 by Molmil
The structure of S172A Keap1-BTB domain
分子名称: Kelch-like ECH-associated protein 1
著者Mena, E.L, Gee, C.L, Kuriyan, J, Rape, M.
登録日2020-03-16
公開日2020-08-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for dimerization quality control.
Nature, 586, 2020
6X3O
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BU of 6x3o by Molmil
Co-structure of BTK kinase domain with L-005191930 inhibitor
分子名称: 4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide, 4-{8-amino-3-[(6R,8aS)-3-oxo-3,5,6,7,8,8a-hexahydroindolizin-6-yl]imidazo[1,5-a]pyrazin-1-yl}-3-methoxy-N-[4-(trifluoromethyl)pyridin-2-yl]benzamide, Tyrosine-protein kinase BTK
著者Fischmann, T.O.
登録日2020-05-21
公開日2020-07-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Potent, non-covalent reversible BTK inhibitors with 8-amino-imidazo[1,5-a]pyrazine core featuring 3-position bicyclic ring substitutes.
Bioorg.Med.Chem.Lett., 30, 2020
5LA7
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BU of 5la7 by Molmil
Crystal structure of human proheparanase, in complex with glucuronic acid configured aziridine probe JJB355
分子名称: (1~{S},2~{R},3~{S},4~{S},5~{S},6~{R})-2-(8-azidooctylamino)-3,4,5,6-tetrakis(oxidanyl)cyclohexane-1-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wu, L, Jin, Y, Davies, G.J.
登録日2016-06-13
公開日2017-05-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Activity-based probes for functional interrogation of retaining beta-glucuronidases.
Nat. Chem. Biol., 13, 2017
3OMX
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BU of 3omx by Molmil
Crystal structure of Ssu72 with vanadate complex
分子名称: CG14216, VANADATE ION
著者Zhang, Y, Zhang, M, Zhang, Y.
登録日2010-08-27
公開日2011-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3366 Å)
主引用文献Crystal structure of Ssu72, an essential eukaryotic phosphatase specific for the C-terminal domain of RNA polymerase II, in complex with a transition state analogue.
Biochem.J., 434, 2011
5KKJ
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BU of 5kkj by Molmil
2.0-Angstrom In situ Mylar structure of hen egg-white lysozyme (HEWL) at 293 K
分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETIC ACID, CHLORIDE ION, ...
著者Broecker, J, Ernst, O.P.
登録日2016-06-21
公開日2017-02-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals.
Cryst Growth Des, 16, 2016
6VOR
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BU of 6vor by Molmil
Crystal structure of macaque anti-HIV-1 antibody RM20E1
分子名称: GLYCINE, RM20E1 Fab heavy chain, RM20E1 Fab light chain
著者Yuan, M, Wilson, I.A.
登録日2020-01-31
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates.
Plos Pathog., 16, 2020
8QOA
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BU of 8qoa by Molmil
Structure of SecM-stalled Escherichia coli 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
著者Gersteuer, F, Morici, M, Wilson, D.N.
登録日2023-09-28
公開日2024-03-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome.
Nat Commun, 15, 2024
8QCQ
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BU of 8qcq by Molmil
B. subtilis ApdA-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-28
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
8QBT
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BU of 8qbt by Molmil
E. coli ApdP-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-25
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
6QO8
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BU of 6qo8 by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis anaerobically soaked with ferrous ions
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ...
著者Grave, K, Hogbom, M.
登録日2019-02-12
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.31921768 Å)
主引用文献Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
6QO9
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BU of 6qo9 by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis soaked with manganese ions
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ...
著者Grave, K, Hogbom, M.
登録日2019-02-12
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.299 Å)
主引用文献Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
7UK4
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BU of 7uk4 by Molmil
KS-AT di-domain of mycobacterial Pks13 with endogenous KS ligand bound
分子名称: Polyketide synthase PKS13, UNKNOWN LIGAND
著者Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M.
登録日2022-03-31
公開日2023-02-15
最終更新日2023-03-29
実験手法ELECTRON MICROSCOPY (1.94 Å)
主引用文献Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
8TPJ
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BU of 8tpj by Molmil
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
分子名称: Allophycocyanin alpha chain, Allophycocyanin beta chain, Orange carotenoid-binding protein, ...
著者Sauer, P.V, Sutter, M, Cupellini, L.
登録日2023-08-04
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes.
Sci Adv, 10, 2024
6QO7
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BU of 6qo7 by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis aerobically soaked with ferrous ions (photo-reduced)
分子名称: CHLORIDE ION, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
著者Grave, K, Hogbom, M.
登録日2019-02-12
公開日2019-08-21
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.628 Å)
主引用文献Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
6W66
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BU of 6w66 by Molmil
The structure of the F64A, S172A mutant Keap1-BTB domain in complex with SKP1-FBXL17
分子名称: F-box/LRR-repeat protein 17, Kelch-like ECH-associated protein 1, S-phase kinase-associated protein 1
著者Mena, E.L, Gee, C.L, Kuriyan, J, Rape, M.
登録日2020-03-16
公開日2020-08-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Structural basis for dimerization quality control.
Nature, 586, 2020
6QO5
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BU of 6qo5 by Molmil
Crystal structure of apo (metal-free) ribonucleotide reductase NrdF from Bacillus anthracis
分子名称: CHLORIDE ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
著者Grave, K, Hogbom, M.
登録日2019-02-12
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.511 Å)
主引用文献Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
6QOB
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BU of 6qob by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis with partially oxidised di-iron metallocofactor
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, Ribonucleoside-diphosphate reductase subunit beta, ...
著者Grave, K, Hogbom, M.
登録日2019-02-12
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.457 Å)
主引用文献Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
5EUP
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BU of 5eup by Molmil
Structure of the Drosophila melanogaster CP190 BTB domain
分子名称: Centrosome-associated zinc finger protein CP190
著者Plevock, K.M, Galletta, B.J, Slep, K.C, Rusan, N.M.
登録日2015-11-19
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Newly Characterized Region of CP190 Associates with Microtubules and Mediates Proper Spindle Morphology in Drosophila Stem Cells.
Plos One, 10, 2015
3PXN
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BU of 3pxn by Molmil
Crystal structure of the Drosophila kinesin family member Kin10/NOD in complex with divalent manganese and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein Nod, MANGANESE (II) ION
著者Cochran, J.C, Zhao, Y.C, Wilcox, D.E, Kull, F.J.
登録日2010-12-10
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A metal switch for controlling the activity of molecular motor proteins.
Nat.Struct.Mol.Biol., 19, 2012
6WA1
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BU of 6wa1 by Molmil
Dimeric form of the trans-stabilized Hemolysin II C-terminal domain
分子名称: Hemolysin II
著者Kaplan, A.R, Alexandrescu, A.T.
登録日2020-03-24
公開日2021-03-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Protein yoga: Conformational versatility of the Hemolysin II C-terminal domain detailed by NMR structures for multiple states.
Protein Sci., 30, 2021
7U0Y
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BU of 7u0y by Molmil
Crystal structure of Pepper RNA aptamer in complex with HBC599 ligand and Fab BL3-6
分子名称: 4-[(Z)-1-cyano-2-{6-[(2-hydroxyethyl)(methyl)amino]-1-benzothiophen-2-yl}ethenyl]benzonitrile, Fab BL3-6 heavy chain, Fab BL3-6 light chain, ...
著者Rees, H.C, Piccirilli, J.A.
登録日2022-02-19
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Structural Basis for Fluorescence Activation by Pepper RNA.
Acs Chem.Biol., 17, 2022
4YMZ
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BU of 4ymz by Molmil
DHAP bound Leptospira Interrogans Triosephosphate Isomerase (LiTIM)
分子名称: 1,2-ETHANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, SULFATE ION, ...
著者Pareek, V, Balaram, P, Murthy, M.R.N.
登録日2015-03-08
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue 96 in the Plasmodial Enzyme
Chembiochem, 17, 2016
5L77
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BU of 5l77 by Molmil
A glycoside hydrolase mutant with an unreacted activity based probe bound
分子名称: (1~{R},2~{S},3~{R},4~{S},5~{S},6~{R})-7-[8-[(azanylidene-{4}-azanylidene)amino]octyl]-3,4,5-tris(oxidanyl)-7-azabicyclo[4.1.0]heptane-2-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
著者Jin, Y, Wu, L, Jiang, J.B, Overkleeft, H.S, Davies, G.J.
登録日2016-06-02
公開日2017-05-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Activity-based probes for functional interrogation of retaining beta-glucuronidases.
Nat. Chem. Biol., 13, 2017

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