PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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6MOL	Monoextended DARPin M_R12 complex with EpoR 分子名称: Erythropoietin receptor, GLYCEROL, Monoextended DARPin R12 (M_R12) 著者 Jude, K.M, Mohan, K, Garcia, K.C, Guo, Y. 登録日 2018-10-04 公開日 2019-06-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.163 Å) 主引用文献 Topological control of cytokine receptor signaling induces differential effects in hematopoiesis. Science, 364, 2019
7TMA	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2023-01-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TME	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2023-01-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.8 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7Y7P	QDE-1 in complex with RNA template, RNA primer and AMPNPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7Q	QDE-1 in complex with RNA template, RNA primer and 3'-dGTP 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7R	QDE-1 in complex with DNA template, RNA primer and 3'-dGTP 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*AP*AP*CP*TP*AP*CP*CP*GP*TP*CP*GP*GP*A)-3'), ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7S	QDE-1 in complex with DNA template, RNA primer and AMPNPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7UVJ	Rationally Designed ED1 Epitope-Scaffold Immunogen for SARS-CoV-2 分子名称: ACETATE ION, Apolipoprotein E, DI(HYDROXYETHYL)ETHER, ... 著者 Yennawar, N.H, Vishweshwaraiah, Y.L, Dokholyan, N.V. 登録日 2022-05-02 公開日 2022-10-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Adaptation-proof SARS-CoV-2 vaccine design. Adv Funct Mater, 32, 2022
7Y7T	QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*G*AP*GP*AP*CP*CP*TP*TP*TP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
8FEG	CryoEM structure of Kappa Opioid Receptor bound to a semi-peptide and Gi1 分子名称: ACE-TYR-ALA-DTY-THR-THR-CYS-THR-DPN-XT9, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Fay, J.F, Che, T. 登録日 2022-12-06 公開日 2023-12-06 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 Design and structural validation of peptide-drug conjugate ligands of the kappa-opioid receptor. Nat Commun, 14, 2023
3H5G	Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. 分子名称: ACETATE ION, COIL SER L16D-Pen, ZINC ION 著者 Peacock, A.F.A, Stuckey, J.A, Pecoraro, V.L. 登録日 2009-04-22 公開日 2009-07-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. Angew.Chem.Int.Ed.Engl., 48, 2009
7XGF	Crystal structure of BCL-xL in complex with computationally designed inhibitor protein 分子名称: BCL-xL, BCL-xL and MCL-1 dual inhibitor 2 著者 Oh, B.-H, Kim, S. 登録日 2022-04-04 公開日 2022-07-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently. Comput Struct Biotechnol J, 20, 2022
7XGE	Crystal structure of MCL-1 in complex with computationally designed inhibitor protein 分子名称: BCL-xL and MCL-1 dual binder 2, Induced myeloid leukemia cell differentiation protein Mcl-1 著者 Oh, B.-H, Kim, S. 登録日 2022-04-04 公開日 2022-07-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently. Comput Struct Biotechnol J, 20, 2022
7XGG	Crystal structure of BCL-xL in complex with computationally designed inhibitor protein 分子名称: BCL-xL and MCL-1 dual inhibitor, Bcl-2-like protein 1 著者 Oh, B.-H, Kim, S. 登録日 2022-04-04 公開日 2022-07-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently. Comput Struct Biotechnol J, 20, 2022
3KNQ	Beta Turn Optimization of the Gene-3-Protein of Filamentous Phage Fd 分子名称: Attachment protein G3P 著者 Jakob, R.P, Dobbek, H. 登録日 2009-11-12 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Elimination of a cis-proline-containing loop and turn optimization stabilizes a protein and accelerates its folding. J.Mol.Biol., 399, 2010
3TFX	Crystal structure of Orotidine 5'-phosphate decarboxylase from Lactobacillus acidophilus 分子名称: Orotidine 5'-phosphate decarboxylase 著者 Satyanarayana, L, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2011-08-16 公開日 2011-09-28 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Crystal structure of Orotidine 5'-phosphate decarboxylase from Lactobacillus acidophilus To be Published
3H5F	Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. 分子名称: ACETATE ION, CHLORIDE ION, COIL SER L16L-Pen, ... 著者 Peacock, A.F.A, Stuckey, J.A, Pecoraro, V.L. 登録日 2009-04-22 公開日 2009-07-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. Angew.Chem.Int.Ed.Engl., 48, 2009
6XYQ	Multiple system atrophy Type II-2 alpha-synuclein filament 分子名称: Alpha-synuclein 著者 Schweighauser, M, Shi, Y, Tarutani, A, Kametani, F, Murzin, A.G, Ghetti, B, Matsubara, T, Tomita, T, Ando, T, Hasegawa, K, Murayama, S, Yoshida, M, Hasegawa, M, Scheres, S.H.W, Goedert, M. 登録日 2020-01-30 公開日 2020-02-12 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.09 Å) 主引用文献 Structures of alpha-synuclein filaments from multiple system atrophy. Nature, 585, 2020
3MIP	I-MsoI re-designed for altered DNA cleavage specificity (-8GCG) 分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*GP*AP*GP*CP*GP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*CP*GP*CP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*GP*GP*CP*GP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*CP*GP*CP*TP*CP*CP*G)-3'), ... 著者 Taylor, G.K, Stoddard, B.L. 登録日 2010-04-11 公開日 2010-05-19 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairs. Nucleic Acids Res., 38, 2010
5IPF	Crystal structure of Hypoxanthine-guanine phosphoribosyltransferase from Schistosoma mansoni in complex with IMP 分子名称: Hypoxanthine-guanine phosphoribosyltransferase (HGPRT), INOSINIC ACID 著者 Romanello, L, Torini, J.R.S, Bird, L.E, Nettleship, J.E, Owens, R.J, DeMarco, R, Pereira, H.M, Brandao-Neto, J. 登録日 2016-03-09 公開日 2017-03-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 In vitro and in vivo characterization of the multiple isoforms of Schistosoma mansoni hypoxanthine-guanine phosphoribosyltransferases. Mol. Biochem. Parasitol., 229, 2019
6S67	Structure of the Fluorescent Protein AausFP1 from Aequorea cf. australis at pH 7.0 分子名称: Aequorea cf. australis fluorescent protein 1 (AausFP1), GLYCEROL 著者 Depernet, H, Gotthard, G, Lambert, G.G, Shaner, N.C, Royant, A. 登録日 2019-07-02 公開日 2020-07-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Aequorea's secrets revealed: New fluorescent proteins with unique properties for bioimaging and biosensing. Plos Biol., 18, 2020
8A3U	Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL 著者 Arinkin, V, Batra-Safferling, R, Granzin, J. 登録日 2022-06-09 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis) To Be Published
8A7F	Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (asymmetrical variant, trigonal form with long c axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL 著者 Batra-Safferling, R, Arinkin, V, Granzin, J. 登録日 2022-06-21 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (asymmetrical variant, trigonal form with long c axis) To Be Published
8A7H	Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Flavin mononucleotide (semi-quinone intermediate), Putative Sensory box protein,Sensor protein FixL 著者 Arinkin, V, Granzin, J, Batra-Safferling, R. 登録日 2022-06-21 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.145 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis) To Be Published
8G4E	Green Fluorescence Protein imaged on a cryo-EM imaging scaffold 分子名称: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein 著者 Castells-Graells, R, Sawaya, M.R, Yeates, T.O. 登録日 2023-02-09 公開日 2023-08-09 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold. Proc.Natl.Acad.Sci.USA, 120, 2023

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