PDB: 217477 件ウェブページステータス検索Chemie searchBIRD

---

6KNH	Crystal structure of SbnH in complex with citrate, a PLP-dependent decarboxylase in Staphyloferrin B biothesynthesis 分子名称: CITRIC ACID, PHOSPHATE ION, Probable diaminopimelate decarboxylase protein 著者 Tang, J, Ju, Y, Zhou, H. 登録日 2019-08-05 公開日 2019-11-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural Insights into Substrate Recognition and Activity Regulation of the Key Decarboxylase SbnH in Staphyloferrin B Biosynthesis. J.Mol.Biol., 431, 2019
3Q2A	Toluene 4 monooxygenase HD complex with inhibitor p-aminobenzoate 分子名称: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4-AMINOBENZOIC ACID, FE (III) ION, ... 著者 Acheson, J.F, Bailey, L.J, Fox, B.G. 登録日 2010-12-19 公開日 2011-12-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Crystallographic analysis of active site contributions to regiospecificity in the diiron enzyme toluene 4-monooxygenase. Biochemistry, 51, 2012
3Q3O	Toluene 4 monooxygenase HD complex with phenol 分子名称: FE (III) ION, PENTAETHYLENE GLYCOL, PHENOL, ... 著者 Acheson, J.F, Bailey, L.J, Fox, B.G. 登録日 2010-12-22 公開日 2011-12-28 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystallographic analysis of active site contributions to regiospecificity in the diiron enzyme toluene 4-monooxygenase. Biochemistry, 51, 2012
4TNJ	RT XFEL structure of Photosystem II 500 ms after the 2nd illumination (2F) at 4.5 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K. 登録日 2014-06-04 公開日 2014-07-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun, 5, 2014
4TNI	RT XFEL structure of Photosystem II 500 ms after the third illumination at 4.6 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K. 登録日 2014-06-04 公開日 2014-07-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (4.6 Å) 主引用文献 Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun, 5, 2014
4OGA	Insulin in complex with Site 1 of the human insulin receptor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin A chain, Insulin B chain, ... 著者 Lawrence, M.C, Menting, J.G. 登録日 2014-01-15 公開日 2014-08-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Protective hinge in insulin opens to enable its receptor engagement. Proc.Natl.Acad.Sci.USA, 111, 2014
4TNK	RT XFEL structure of Photosystem II 250 microsec after the third illumination at 5.2 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K. 登録日 2014-06-04 公開日 2014-07-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (5.2 Å) 主引用文献 Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun, 5, 2014
4TNH	RT XFEL structure of Photosystem II in the dark state at 4.9 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K. 登録日 2014-06-04 公開日 2014-07-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.900007 Å) 主引用文献 Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy. Nat Commun, 5, 2014
6HTS	Cryo-EM structure of the human INO80 complex bound to nucleosome 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ... 著者 Ayala, R, Willhoft, O, Aramayo, R.J, Wilkinson, M, McCormack, E.A, Ocloo, L, Wigley, D.B, Zhang, X. 登録日 2018-10-04 公開日 2018-11-07 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure and regulation of the human INO80-nucleosome complex. Nature, 556, 2018
5EBZ	Crystal structure of human IKK1 分子名称: 2,3-di-O-sulfo-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-2,4-di-O-sulfo-alpha-D-glucopyranose, 2-azanyl-5-phenyl-3-(4-sulfamoylphenyl)benzamide, Inhibitor of nuclear factor kappa-B kinase subunit alpha, ... 著者 Polley, S, Passos, D, Huang, D, Biswas, T, Verma, I, Lyumkis, D, Ghosh, G. 登録日 2015-10-20 公開日 2016-11-02 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structural Basis for the Activation of IKK1/ alpha. Cell Rep, 17, 2016
1S88	NMR structure of a DNA duplex with two INA nucleotides inserted opposite each other, dCTCAACXCAAGCT:dAGCTTGXGTTGAG 分子名称: 5'-D(*AP*GP*CP*TP*TP*GP*(2DM)P*GP*TP*TP*GP*AP*G)-3', 5'-D(*CP*TP*CP*AP*AP*CP*(2DM)P*CP*AP*AP*GP*CP*T)-3' 著者 Nielsen, C.B, Petersen, M, Pedersen, E.B, Hansen, P.E, Christensen, U.B. 登録日 2004-01-31 公開日 2004-05-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 NMR structure determination of a modified DNA oligonucleotide containing a new intercalating nucleic acid. Bioconjug.Chem., 15, 2004
6OKS	CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
4K4W	Poliovirus polymerase elongation complex (r5+2_form) 分子名称: RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA-directed RNA polymerase 3D-POL 著者 Gong, P, Peersen, O.B. 登録日 2013-04-12 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One, 8, 2013
5E58	Crystal Structure Of Cytochrome P450 2B35 from Desert Woodrat Neotoma Lepida in complex with 4-(4-chlorophenyl)imidazole 分子名称: 4-(4-CHLOROPHENYL)IMIDAZOLE, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 family 2 subfamily B, ... 著者 Shah, M.B, Stout, C.D, Halpert, J.R. 登録日 2015-10-08 公開日 2016-02-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure-Function Analysis of Mammalian CYP2B Enzymes Using 7-Substituted Coumarin Derivatives as Probes: Utility of Crystal Structures and Molecular Modeling in Understanding Xenobiotic Metabolism. Mol.Pharmacol., 89, 2016
7VKM	Crystal structure of TrkA (G595R) kinase domain 分子名称: Tyrosine-protein kinase receptor 著者 Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A. 登録日 2021-09-30 公開日 2021-10-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations. Mol.Cancer Ther., 20, 2021
7VKO	Crystal structure of TrkA kinase with repotrectinib 分子名称: Repotrectinib, SULFATE ION, Tyrosine-protein kinase receptor 著者 Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A. 登録日 2021-09-30 公開日 2021-10-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations. Mol.Cancer Ther., 20, 2021
1ELB	Analogous inhibitors of elastase do not always bind analogously 分子名称: 6-ammonio-N-(trifluoroacetyl)-L-norleucyl-N-[4-(1-methylethyl)phenyl]-L-leucinamide, CALCIUM ION, ELASTASE, ... 著者 Mattos, C, Rasmussen, B, Ding, X, Petsko, G.A, Ringe, D. 登録日 1993-12-07 公開日 1994-06-22 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Analogous inhibitors of elastase do not always bind analogously. Nat.Struct.Biol., 1, 1994
7SGO	Crystal structure of periplasmic domain of Helicobacter pylori FliL (residues 81 to 183) (crystal form B) 分子名称: Flagellar protein FliL 著者 Chan, K.L, Peterson, B, Khan, M.F, Roujeinikova, A. 登録日 2021-10-06 公開日 2022-03-23 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.695 Å) 主引用文献 The flagellar motor protein FliL forms a scaffold of circumferentially positioned rings required for stator activation. Proc.Natl.Acad.Sci.USA, 119, 2022
7VKN	Crystal structure of TrkA (G595R) kinase with repotrectinib 分子名称: Repotrectinib, SULFATE ION, Tyrosine-protein kinase receptor 著者 Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A. 登録日 2021-09-30 公開日 2021-10-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations. Mol.Cancer Ther., 20, 2021
1ESA	DIRECT STRUCTURE OBSERVATION OF AN ACYL-ENZYME INTERMEDIATE IN THE HYDROLYSIS OF AN ESTER SUBSTRATE BY ELASTASE 分子名称: CALCIUM ION, PORCINE PANCREATIC ELASTASE, SULFATE ION 著者 Ding, X, Rasmussen, B, Petsko, G.A, Ringe, D. 登録日 1994-02-04 公開日 1994-04-30 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Direct structural observation of an acyl-enzyme intermediate in the hydrolysis of an ester substrate by elastase. Biochemistry, 33, 1994
5ZS0	Structure of glycoprotein B Domain IV of pseudorabies virus with 7B11 antibody 分子名称: 7B11 heavy chain, 7B11 light chain, Envelope glycoprotein B,Envelope glycoprotein B 著者 Hu, X.L, Yang, F.L. 登録日 2018-04-26 公開日 2019-05-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.29 Å) 主引用文献 Structural Basis for the Recognition of Pseudorabies Virus Glycoprotein B by a Complement-dependent Neutralizing Antibody To Be Published
7VUP	Structure of NF-kB p52 homodimer bound to +1/-1 swap P-Selectin kB DNA fragment 分子名称: DNA (5'-D(*AP*AP*GP*GP*GP*GP*GP*AP*GP*TP*CP*CP*CP*CP*TP*TP*G)-3'), DNA (5'-D(*CP*AP*AP*GP*GP*GP*GP*AP*CP*TP*CP*CP*CP*CP*CP*TP*T)-3'), Nuclear factor NF-kappa-B p52 subunit 著者 Meshcheryakov, V.A, Wang, V.Y.-F. 登録日 2021-11-04 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation. Elife, 12, 2023
5E0I	Crystal structure of the HBV capsid Y132A mutant (VCID 8772) in complex with NVR10-001E2 at 1.95A resolution 分子名称: Capsid protein, methyl 4-(2-bromo-4-fluorophenyl)-6-(morpholin-4-ylmethyl)-2-(1,3-thiazol-2-yl)pyrimidine-5-carboxylate 著者 Lukacs, C.M, Abendroth, J, Klumpp, K. 登録日 2015-09-28 公開日 2015-12-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 High-resolution crystal structure of a hepatitis B virus replication inhibitor bound to the viral core protein. Proc.Natl.Acad.Sci.USA, 112, 2015
7VUQ	Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment 分子名称: DNA (5'-D(*CP*AP*AP*GP*GP*GP*GP*TP*TP*AP*CP*CP*CP*CP*CP*TP*T)-3'), DNA (5'-D(*GP*AP*AP*GP*GP*GP*GP*GP*TP*AP*AP*CP*CP*CP*CP*TP*TP*G)-3'), Nuclear factor NF-kappa-B p52 subunit 著者 Meshcheryakov, V.A, Wang, V.Y.-F. 登録日 2021-11-04 公開日 2021-11-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation. Elife, 12, 2023
5XCA	Crystal structure of GH45 endoglucanase EG27II D137A mutant in complex with cellobiose 分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. 登録日 2017-03-22 公開日 2018-03-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019

<147148149150151152153154155156157158159160161162>