PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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5HS0	Computationally Designed Cyclic Tetramer ank1C4_7 分子名称: Ankyrin domain protein ank1C4_7, GLYCEROL, SULFATE ION 著者 McNamara, D.E, Cascio, D, Fallas, J.A, Baker, D, Yeates, T.O. 登録日 2016-01-24 公開日 2017-04-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Computational design of self-assembling cyclic protein homo-oligomers. Nat Chem, 9, 2017
5HHD	Crystal Structure of Chemically Synthesized Heterochiral {RFX037 plus VEGF-A} Protein Complex in space group P21 分子名称: D-Peptide RFX037.D, D-Vascular endothelial growth factor, DI(HYDROXYETHYL)ETHER, ... 著者 Uppalapati, M, LEE, D.J, Mandal, K, Kent, S.B.H, Sidhu, S. 登録日 2016-01-10 公開日 2016-03-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A Potent d-Protein Antagonist of VEGF-A is Nonimmunogenic, Metabolically Stable, and Longer-Circulating in Vivo. Acs Chem.Biol., 11, 2016
5HOY	X-ray crystallographic structure of an A-beta 17_36 beta-hairpin. X-ray diffractometer data set. (LVFFAEDCGSNKCAII(SAR)LMV). 分子名称: Amyloid beta A4 protein, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500) 著者 Kreutzer, A.G, Spencer, R.K, Nowick, J.S. 登録日 2016-01-19 公開日 2016-03-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.295 Å) 主引用文献 X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an A beta 17-36 beta-Hairpin. J.Am.Chem.Soc., 138, 2016
5HRZ	Computationally Designed Trimer 1na0C3_3 分子名称: TPR domain protein 1na0C3_3 著者 Cascio, D, McNamara, D.E, Fallas, J.A, Baker, D, Yeates, T.O. 登録日 2016-01-24 公開日 2017-04-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Computational design of self-assembling cyclic protein homo-oligomers. Nat Chem, 9, 2017
4GN3	OBody AM1L10 bound to hen egg-white lysozyme 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Lysozyme C, ... 著者 Steemson, J.D, Liddament, M.T. 登録日 2012-08-16 公開日 2013-08-21 最終更新日 2014-02-12 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold. Plos One, 9, 2014
5I1P	Villin headpiece subdomain with a Lys30 to beta-3-homolysine substitution 分子名称: D-Villin headpiece subdomain, ETHANOL, Villin-1 著者 Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T. 登録日 2016-02-05 公開日 2016-05-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization. J.Am.Chem.Soc., 138, 2016
5I3P	DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO COMPOUND 27 分子名称: 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-[(3-methoxyphenyl)sulfonyl]benzamide, Genome polyprotein, ZINC ION 著者 Noble, C.G. 登録日 2016-02-10 公開日 2016-07-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling Plos Pathog., 12, 2016
5I1O	Villin headpiece subdomain with a Gln26 to ACPC substitution 分子名称: D-Villin headpiece subdomain, Villin-1 著者 Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T. 登録日 2016-02-05 公開日 2016-05-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.348 Å) 主引用文献 Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization. J.Am.Chem.Soc., 138, 2016
5I1Y	NvPizza2-H16S58 with cobalt 分子名称: COBALT (II) ION, SULFATE ION, nvPizz2a-H16S58 著者 Tame, J.R.H, Voet, A.R.D. 登録日 2016-02-07 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 NvPizza2-H16S58 with cobalt To Be Published
5I1N	Villin headpiece subdomain with a Gln26 to beta-3-homoglutamine substitution 分子名称: D-Villin headpiece subdomain, Villin-1 著者 Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T. 登録日 2016-02-05 公開日 2016-05-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization. J.Am.Chem.Soc., 138, 2016
5I1Z	Structure of nvPizza2-H16S58 分子名称: SULFATE ION, nvPizza2-H16S58 著者 Tame, J.R.H, Voet, A.R.D. 登録日 2016-02-07 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Broken Symmetry: Partial domain swapping in an artificial trimeric protein To Be Published
5IF6	Structure of a computationally designed 17-OHP binder 分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, OHP9_1c, SODIUM ION 著者 Stoddard, B.L, Doyle, L.A. 登録日 2016-02-25 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.501 Å) 主引用文献 Sampling and energy evaluation challenges in ligand binding protein design. Protein Sci., 26, 2017
5I1S	Villin headpiece subdomain with a Lys30 to APC substitution 分子名称: D-Villin headpiece subdomain, Villin-1 著者 Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T. 登録日 2016-02-05 公開日 2016-05-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization. J.Am.Chem.Soc., 138, 2016
5HHC	Crystal Structure of Chemically Synthesized Heterochiral {RFX037 plus VEGF-A} Protein Complex in space group P21/n 分子名称: D- Vascular endothelial growth factor-A, GLYCEROL, Vascular endothelial growth factor A 著者 Uppalapati, M, Lee, D.J, Mandal, K, Kent, S.B.H, Sidhu, S. 登録日 2016-01-10 公開日 2016-03-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A Potent d-Protein Antagonist of VEGF-A is Nonimmunogenic, Metabolically Stable, and Longer-Circulating in Vivo. Acs Chem.Biol., 11, 2016
4GCZ	Structure of a blue-light photoreceptor 分子名称: ADENOSINE-5'-DIPHOSPHATE, Blue-light photoreceptor, Sensor protein fixL, ... 著者 Diensthuber, R.P, Bommer, M, Moglich, A. 登録日 2012-07-31 公開日 2013-06-19 最終更新日 2017-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Full-length structure of a sensor histidine kinase pinpoints coaxial coiled coils as signal transducers and modulators. Structure, 21, 2013
5HFY	Backbone Modifications in the Protein GB1 Helix: beta-2-Ala24, beta-3-Lys28, beta-3-Lys31, beta-3-Asn35 分子名称: Immunoglobulin G-binding protein G 著者 Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S. 登録日 2016-01-07 公開日 2016-02-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold. Chem.Commun.(Camb.), 52, 2016
5HG2	Backbone Modifications in the Protein GB1 Helix: beta-3-Ala24, beta-3-Lys28, beta-3-Lys31, beta-2-Asn35 分子名称: GLYCEROL, Immunoglobulin G-binding protein G, MAGNESIUM ION 著者 Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S. 登録日 2016-01-07 公開日 2016-02-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold. Chem.Commun.(Camb.), 52, 2016
5JJR	Dengue 3 NS5 protein with compound 29 分子名称: 1,2-ETHANEDIOL, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-4-methoxy-2-methyl-N-[(quinolin-8-yl)sulfonyl]benzamide, DI(HYDROXYETHYL)ETHER, ... 著者 Lescar, J, El Sahili, A. 登録日 2016-04-25 公開日 2016-07-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling Plos Pathog., 12, 2016
5JJS	Dengue 3 NS5 protein with compound 27 分子名称: 1,2-ETHANEDIOL, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-{[(1R,3R)-3-methoxycyclohexyl]sulfonyl}benzamide, DI(HYDROXYETHYL)ETHER, ... 著者 Lescar, J, El Sahili, A. 登録日 2016-04-25 公開日 2016-07-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling Plos Pathog., 12, 2016
5I3Q	DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO COMPOUND 29 分子名称: 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-4-methoxy-2-methyl-N-[(quinolin-8-yl)sulfonyl]benzamide, Genome polyprotein, ZINC ION 著者 Noble, C.G. 登録日 2016-02-10 公開日 2016-07-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling Plos Pathog., 12, 2016
5IER	Structure of a computationally designed 17-OHP binder 分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, OHP9, SODIUM ION, ... 著者 Stoddard, B.L, Doyle, L.A. 登録日 2016-02-25 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.005 Å) 主引用文献 Sampling and energy evaluation challenges in ligand binding protein design. Protein Sci., 26, 2017
6MCT	A designed pentameric membrane protein stabilized by van der Waals interaction 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, mini-eVgL membrane protein 著者 Mravic, M, Liu, L, Degrado, W.F. 登録日 2018-09-02 公開日 2019-04-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Packing of apolar side chains enables accurate design of highly stable membrane proteins. Science, 363, 2019
6JON	Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Primase 著者 Guo, H.J, Li, M.J, Wu, H, Yu, F, He, J.H. 登録日 2019-03-22 公開日 2019-06-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity. Biochem.Biophys.Res.Commun., 515, 2019
5HOX	X-ray crystallographic structure of an A-beta 17_36 beta-hairpin. Synchrotron data set. (LVFFAEDCGSNKCAII(SAR)LMV). 分子名称: Amyloid beta A4 protein, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500) 著者 Kreutzer, A.G, Nowick, J.S, Spencer, R.K. 登録日 2016-01-19 公開日 2016-03-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an A beta 17-36 beta-Hairpin. J.Am.Chem.Soc., 138, 2016
5HPN	A circularly permuted PduA forming an icosahedral cage 分子名称: Permuted PduA, SULFATE ION 著者 Leibly, D.J, Jorda, J, Yeates, T.O. 登録日 2016-01-20 公開日 2016-04-06 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.509 Å) 主引用文献 Structure of a novel 13 nm dodecahedral nanocage assembled from a redesigned bacterial microcompartment shell protein. Chem.Commun.(Camb.), 52, 2016

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