PDB: 1712 件ウェブページステータス検索Chemie searchBIRD

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8KC7	Rpd3S histone deacetylase complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J. 登録日 2023-08-06 公開日 2023-09-13 最終更新日 2023-10-18 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
8KD4	Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class1 分子名称: 187bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... 著者 Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J. 登録日 2023-08-09 公開日 2023-09-13 最終更新日 2023-10-11 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
8KD6	Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class3 分子名称: 187bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... 著者 Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J. 登録日 2023-08-09 公開日 2023-09-13 最終更新日 2023-10-11 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
8KD7	Rpd3S in complex with nucleosome with H3K36MLA modification and 167bp DNA 分子名称: 167bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... 著者 Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Chang, X, Chao, W.C.H, He, J. 登録日 2023-08-09 公開日 2023-09-13 最終更新日 2023-10-11 実験手法 ELECTRON MICROSCOPY (3.09 Å) 主引用文献 Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
1F04	SOLUTION STRUCTURE OF OXIDIZED BOVINE MICROSOMAL CYTOCHROME B5 MUTANT (E44A, E48A, E56A, D60A) AND ITS INTERACTION WITH CYTOCHROME C 分子名称: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE 著者 Wu, Y.B, Lu, J, Qian, C.M, Tang, W.X, Li, E.C, Wang, J.F, Wang, Y.H, Wang, W.H, Lu, J.X, Xie, Y, Huang, Z.X. 登録日 2000-05-14 公開日 2000-06-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of cytochrome b(5) mutant (E44/48/56A/D60A) and its interaction with cytochrome c. Eur.J.Biochem., 268, 2001
5IUM	Crystal structure of phosphorylated DesKC 分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... 著者 Trajtenberg, F, Buschiazzo, A. 登録日 2016-03-18 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.162 Å) 主引用文献 Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action. Elife, 5, 2016
5J4N	Crystal structure of the L-arginine/agmatine antiporter AdiC in complex with agmatine at 2.6 Angstroem resolution 分子名称: AGMATINE, Arginine/agmatine antiporter 著者 Jeckelmann, J.M, Ilgue, H, Fotiadis, D. 登録日 2016-04-01 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.594 Å) 主引用文献 Insights into the molecular basis for substrate binding and specificity of the wild-type L-arginine/agmatine antiporter AdiC. Proc.Natl.Acad.Sci.USA, 113, 2016
1FMH	NMR SOLUTION STRUCTURE OF A DESIGNED HETERODIMERIC LEUCINE ZIPPER 分子名称: GENERAL CONTROL PROTEIN GCN4 著者 Marti, D.N, Jelesarov, I, Bosshard, H.R. 登録日 2000-08-17 公開日 2000-11-01 最終更新日 2021-11-03 実験手法 SOLUTION NMR 主引用文献 Interhelical ion pairing in coiled coils: solution structure of a heterodimeric leucine zipper and determination of pKa values of Glu side chains. Biochemistry, 39, 2000
5T2C	CryoEM structure of the human ribosome at 3.6 Angstrom resolution 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Zhang, X, Lai, M, Zhou, Z.H. 登録日 2016-08-23 公開日 2017-01-25 最終更新日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes. Nat Commun, 7, 2016
8HEA	Esterase2 (EaEst2) from Exiguobacterium antarcticum 分子名称: Thermostable carboxylesterase Est30 著者 Hwang, J, Lee, J.H. 登録日 2022-11-08 公開日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Structural and Biochemical Insights into Bis(2-hydroxyethyl) Terephthalate Degrading Carboxylesterase Isolated from Psychrotrophic Bacterium Exiguobacterium antarcticum. Int J Mol Sci, 24, 2023
8HGU	Epoxide hydrolase from Bosea sp. PAMC 26642 分子名称: Alpha/beta hydrolase 著者 Lee, M.J, Hwang, J, Do, H, Lee, J.H. 登録日 2022-11-15 公開日 2023-11-22 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structural insights into the distinct substrate preferences of two bacterial epoxide hydrolases. Int.J.Biol.Macromol., 264, 2024
8HM5	Epoxide hydrolase from Caballeronia sordidicola PAMC 26510 分子名称: Epoxide hydrolase 著者 Hwang, J, Lee, M.J, Do, H, Lee, J.H. 登録日 2022-12-02 公開日 2023-12-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Structural insights into the distinct substrate preferences of two bacterial epoxide hydrolases. Int.J.Biol.Macromol., 264, 2024
8IB0	The amyloid structure of mouse RIPK1 RHIM-containing domain by solid-state NMR 分子名称: Receptor-interacting serine/threonine-protein kinase 1 著者 Liu, J, Xialian, W. 登録日 2023-02-09 公開日 2023-03-22 最終更新日 2024-05-15 実験手法 SOLID-STATE NMR 主引用文献 The amyloid structure of mouse RIPK1 RHIM-containing domain by solid-state NMR To Be Published
4GSS	HUMAN GLUTATHIONE S-TRANSFERASE P1-1 Y108F MUTANT 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE, S-HEXYLGLUTATHIONE 著者 Oakley, A, Rossjohn, J, Parker, M. 登録日 1997-01-20 公開日 1998-01-28 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Multifunctional role of Tyr 108 in the catalytic mechanism of human glutathione transferase P1-1. Crystallographic and kinetic studies on the Y108F mutant enzyme. Biochemistry, 36, 1997
3N9J	Structure of human Glutathione Transferase Pi class in complex with Ethacraplatin 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... 著者 Parker, L.J, Parker, M.W. 登録日 2010-05-30 公開日 2011-05-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Studies of glutathione transferase P1-1 bound to a platinum(IV)-based anticancer compound reveal the molecular basis of its activation. To be Published
3O76	1.8 Angstroms molecular structure of mouse liver glutathione S-transferase mutant C47A complexed with S-(P-nitrobenzyl)glutathione 分子名称: Glutathione S-transferase P 1, S-(P-NITROBENZYL)GLUTATHIONE 著者 Canals, A, Coll, M. 登録日 2010-07-30 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Site-directed mutagenesis of mouse glutathione transferase P1-1 unlocks masked cooperativity, introduces a novel mechanism for 'ping pong' kinetic behaviour, and provides further structural evidence for participation of a water molecule in proton abstraction from glutathione. Febs J., 278, 2011
7T2Y	X-ray structure of a designed cold unfolding four helix bundle 分子名称: Designed cold unfolding four helix bundle 著者 Harrison, J.S, Kuhlman, B, Szyperski, T, Premkumar, L, Maguire, J, Pulavarti, S, Yuen, S. 登録日 2021-12-06 公開日 2022-03-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 From Protein Design to the Energy Landscape of a Cold Unfolding Protein. J.Phys.Chem.B, 126, 2022
4RKB	Crystal structure of Staphylococcal nuclease variant Delta+PHS V66T/V99T at cryogenic temperature 分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease 著者 Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B. 登録日 2014-10-12 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Cavities in proteins to be published
2QF7	Crystal structure of a complete multifunctional pyruvate carboxylase from Rhizobium etli 分子名称: CHLORIDE ION, COENZYME A, FORMIC ACID, ... 著者 St Maurice, M, Surinya, K.H, Rayment, I. 登録日 2007-06-27 公開日 2007-09-04 最終更新日 2012-02-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Domain architecture of pyruvate carboxylase, a biotin-dependent multifunctional enzyme Science, 317, 2007
4RUV	Crystal structure of thioredoxin 2 from Staphylococcus aureus NCTC8325 分子名称: Thioredoxin 著者 Bose, M, Biswas, R, Roychowdhury, A, Bhattacharyya, S, Ghosh, A.K, Das, A.K. 登録日 2014-11-22 公開日 2015-12-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Elucidation of the mechanism of disulfide exchange between staphylococcal thioredoxin2 and thioredoxin reductase2: A structural insight. Biochimie, 160, 2019
2R5O	Crystal structure of the C-terminal domain of wzt 分子名称: CHLORIDE ION, Putative ATP binding component of ABC-transporter, SODIUM ION, ... 著者 Kimber, M.S, Cuthbertson, L, Whitfield, C. 登録日 2007-09-04 公開日 2007-12-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Substrate binding by a bacterial ABC transporter involved in polysaccharide export. Proc.Natl.Acad.Sci.Usa, 104, 2007
2RET	The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus 分子名称: CHLORIDE ION, EpsJ, Pseudopilin EpsI, ... 著者 Yanez, M.E, Korotkov, K.V, Abendroth, J, Hol, W.G.J. 登録日 2007-09-27 公開日 2008-02-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the type 2 secretion system of Vibrio vulnificus. J.Mol.Biol., 375, 2008
7TQL	CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B. 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Lapointe, C.P, Grosely, R, Sokabe, M, Alvarado, C, Wang, J, Montabana, E, Villa, N, Shin, B, Dever, T, Fraser, C, Fernandez, I.S, Puglisi, J.D. 登録日 2022-01-26 公開日 2022-04-27 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 eIF5B and eIF1A reorient initiator tRNA to allow ribosomal subunit joining. Nature, 607, 2022
4UG0	STRUCTURE OF THE HUMAN 80S RIBOSOME 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S RIBOSOMAL PROTEIN, ... 著者 Khatter, H, Myasnikov, A.G, Natchiar, S.K, Klaholz, B.P. 登録日 2015-03-20 公開日 2015-06-10 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of the human 80S ribosome NATURE, 520, 2015
4U79	Crystal structure of human JNK3 in complex with a benzenesulfonamide inhibitor. 分子名称: Mitogen-activated protein kinase 10, N-{4-[(3-{2-[(trans-4-aminocyclohexyl)amino]pyrimidin-4-yl}pyridin-2-yl)oxy]naphthalen-1-yl}benzenesulfonamide 著者 Mohr, C. 登録日 2014-07-30 公開日 2014-10-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Unfolded Protein Response in Cancer: IRE1 alpha Inhibition by Selective Kinase Ligands Does Not Impair Tumor Cell Viability. Acs Med.Chem.Lett., 6, 2015

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