PDB: 45459 件ウェブページステータス検索Chemie searchBIRD

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3CMV	Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein recA 著者 Pavletich, N.P. 登録日 2008-03-24 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures. Nature, 453, 2008
3FGO	Crystal Structure of the E2 magnesium fluoride complex of the (SR) Ca2+-ATPase with bound CPA and AMPPCP 分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, ACETATE ION, MAGNESIUM ION, ... 著者 Laursen, M, Bublitz, M, Moncoq, K, Olesen, C, Moller, J.V, Young, H.S, Nissen, P, Morth, J.P. 登録日 2008-12-08 公開日 2009-04-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Cyclopiazonic acid is complexed to a divalent metal ion when bound to the sarcoplasmic reticulum Ca2+-ATPase. J.Biol.Chem., 2009
3U41	Crystal structure of Escherichia coli DmsD in space group P212121 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Stevens, C.M, Paetzel, M. 登録日 2011-10-06 公開日 2013-02-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献
3RTG	Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with Coenzyme A and ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, COENZYME A, MAGNESIUM ION, ... 著者 Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W. 登録日 2011-05-03 公開日 2011-06-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.052 Å) 主引用文献 Identification of unknown protein function using metabolite cocktail screening. Structure, 20, 2012
3FM6	Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii 分子名称: CALCIUM ION, FE (III) ION, GLYCEROL, ... 著者 Piontek, K, Martinez, A.T, Choinowski, T, Plattner, D.A. 登録日 2008-12-19 公開日 2009-12-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates To be Published
3U6X	Phage TP901-1 baseplate tripod 分子名称: BPP, BROMIDE ION, ORF48 著者 Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C. 登録日 2011-10-13 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism. Proc.Natl.Acad.Sci.USA, 109, 2012
3FLK	Crystal Structure of Tartrate Dehydrogenase from Pseudomonas putida in complex with NADH, oxalate and metal ion 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, AMMONIUM ION, ... 著者 Malik, R, Viola, R.E. 登録日 2008-12-18 公開日 2009-12-22 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural characterization of tartrate dehydrogenase: a versatile enzyme catalyzing multiple reactions. Acta Crystallogr.,Sect.D, 66, 2010
3FMU	Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii 分子名称: CACODYLATE ION, CALCIUM ION, FE (III) ION, ... 著者 Piontek, K, Martinez, A.T, Choinowski, T, Plattner, D.A. 登録日 2008-12-22 公開日 2009-12-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.04 Å) 主引用文献 Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates To be Published
3CL2	N1 Neuraminidase N294S + Oseltamivir 分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, Neuraminidase 著者 Collins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J. 登録日 2008-03-18 公開日 2008-05-20 最終更新日 2018-08-22 実験手法 X-RAY DIFFRACTION (2.538 Å) 主引用文献 Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants. Nature, 453, 2008
3FOE	Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases 分子名称: 7-[(3R)-3-aminopyrrolidin-1-yl]-8-chloro-1-cyclopropyl-6-fluoro-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA (5'-D(P*AP*CP*CP*AP*AP*GP*GP*TP*CP*AP*TP*GP*AP*AP*T)-3'), DNA (5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3'), ... 著者 Laponogov, I, Sohi, M.K, Veselkov, D.A, Pan, X.-S, Sawhney, R, Thompson, A.W, McAuley, K.E, Fisher, L.M, Sanderson, M.R. 登録日 2008-12-30 公開日 2009-02-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (4.001 Å) 主引用文献 Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases Nat.Struct.Mol.Biol., 16, 2009
3FPB	The Structure of Sarcoplasmic Reticulum Ca2+-ATPase Bound To Cyclopiazonic acid with ATP 分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Moncoq, K, Morth, J.P, Bublitz, M, Laursen, M, Nissen, P, Young, H.S. 登録日 2009-01-05 公開日 2009-04-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Cyclopiazonic acid is complexed to a divalent metal ion when bound to the sarcoplasmic reticulum Ca2+-ATPase. J.Biol.Chem., 284, 2009
3TTB	Structure of the Thioalkalivibrio paradoxus cytochrome c nitrite reductase in complex with sulfite 分子名称: CALCIUM ION, COBALT (II) ION, Eight-heme nitrite reductase, ... 著者 Polyakov, K.M, Trofimov, A.A, Tikhonova, T.V, Tikhonov, A.V, Dorovatovskii, P.V, Popov, V.O. 登録日 2011-09-14 公開日 2011-10-05 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Comparative structural and functional analysis of two octaheme nitrite reductases from closely related Thioalkalivibrio species. Febs J., 279, 2012
3F2Q	Crystal structure of the FMN riboswitch bound to FMN 分子名称: FLAVIN MONONUCLEOTIDE, FMN riboswitch, MAGNESIUM ION, ... 著者 Serganov, A.A, Huang, L. 登録日 2008-10-30 公開日 2009-01-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch. Nature, 458, 2009
3E1P	Crystal structure of E. coli Bacterioferritin (BFR) in which the Ferroxidase centre is inhibited with ZN(II) and high occupancy iron is bound within the cavity. 分子名称: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N. 登録日 2008-08-04 公開日 2009-05-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis for iron mineralization by bacterioferritin J.Am.Chem.Soc., 131, 2009
3S1S	Characterization and crystal structure of the type IIG restriction endonuclease BpuSI 分子名称: 1,2-ETHANEDIOL, IODIDE ION, MANGANESE (II) ION, ... 著者 Shen, B.W, Xu, D, Chan, S.-H, Zheng, Y, Zhu, Y, Xu, S.-Y, Stoddard, B.L. 登録日 2011-05-16 公開日 2011-07-13 最終更新日 2011-10-19 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI. Nucleic Acids Res., 39, 2011
3S28	The crystal structure of sucrose synthase-1 in complex with a breakdown product of the UDP-glucose 分子名称: 1,5-anhydro-D-arabino-hex-1-enitol, 1,5-anhydro-D-fructose, MALONIC ACID, ... 著者 Zheng, Y, Garavito, R.M. 登録日 2011-05-16 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Structure of Sucrose Synthase-1 from Arabidopsis thaliana and Its Functional Implications. J.Biol.Chem., 286, 2011
3RU3	Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NADPH and ATP. 分子名称: ADENOSINE-5'-TRIPHOSPHATE, BETA-6-HYDROXY-1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE, MAGNESIUM ION, ... 著者 Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W. 登録日 2011-05-04 公開日 2011-06-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.605 Å) 主引用文献 Identification of unknown protein function using metabolite cocktail screening. Structure, 20, 2012
3E1L	Crystal structure of E. coli Bacterioferritin (BFR) soaked in phosphate with an alternative conformation of the unoccupied Ferroxidase centre (APO-BFR II). 分子名称: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N. 登録日 2008-08-04 公開日 2009-05-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for iron mineralization by bacterioferritin J.Am.Chem.Soc., 131, 2009
3S2I	Crystal Structure of FurX NADH+:Furfuryl alcohol II 分子名称: FURFURAL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ... 著者 Hayes, R, Sanchez, E.J, Webb, B.N, Hooper, T, Nissen, M.S, Li, Q, Xun, L. 登録日 2011-05-16 公開日 2012-06-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase To be Published
3WPE	Crystal structure of bovine TLR9 in complex with agonistic DNA1668_12mer 分子名称: DNA (5'-D(*CP*AP*TP*GP*AP*CP*GP*TP*TP*CP*CP*T)-3'), Toll-like receptor 9 著者 Ohto, U, Tanji, H, Shimizu, T. 登録日 2014-01-11 公開日 2015-02-11 最終更新日 2015-05-06 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Structural basis of CpG and inhibitory DNA recognition by Toll-like receptor 9 Nature, 520, 2015
3DY4	Crystal structure of yeast 20S proteasome in complex with spirolactacystin 分子名称: Omuralide, open form, Proteasome component C1, ... 著者 Groll, M, Balskus, E, Jacobsen, E. 登録日 2008-07-25 公開日 2008-11-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural analysis of spiro beta-lactone proteasome inhibitors. J.Am.Chem.Soc., 130, 2008
3J6E	Energy minimized average structure of Microtubules stabilized by GmpCpp 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... 著者 Alushin, G.M, Lander, G.C, Kellogg, E.H, Zhang, R, Baker, D, Nogales, E. 登録日 2014-02-18 公開日 2014-06-04 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 High-Resolution Microtubule Structures Reveal the Structural Transitions in alpha beta-Tubulin upon GTP Hydrolysis. Cell(Cambridge,Mass.), 157, 2014
3J7R	Structure of the translating mammalian ribosome-Sec61 complex 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Voorhees, R.M, Fernandez, I.S, Scheres, S.H.W, Hegde, R.S. 登録日 2014-08-01 公開日 2014-09-03 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution. Cell(Cambridge,Mass.), 157, 2014
3WS1	N288Q-N321Q mutant BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (Condition-1B) 分子名称: Beta-lactamase, CALCIUM ION, CESIUM ION 著者 Arai, S, Yonezawa, Y, Okazaki, N, Matsumoto, F, Shimizu, R, Yamada, M, Adachi, M, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R. 登録日 2014-02-27 公開日 2015-03-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site Acta Crystallogr.,Sect.D, 71, 2015
3WST	Crystal structure of C.elegans PRMT7 in complex with SAH(P31) 分子名称: PHOSPHATE ION, Protein arginine N-methyltransferase 7, S-ADENOSYL-L-HOMOCYSTEINE 著者 Hasegawa, M, Toma-fukai, S, Shimizu, T. 登録日 2014-03-21 公開日 2014-04-23 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Protein arginine methyltransferase 7 has a novel homodimer-like structure formed by tandem repeats Febs Lett., 588, 2014

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