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5CDW
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Crystal Structure Analysis of a mutant Grb2 SH2 domain (W121G) with a pYVNV peptide
分子名称: Growth factor receptor-bound protein 2, SER-PTR-VAL-ASN-VAL-GLN
著者Papaioannou, D, Geibel, S, Kunze, M, Kay, C, Waksman, G.
登録日2015-07-05
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Structural and biophysical investigation of the interaction of a mutant Grb2 SH2 domain (W121G) with its cognate phosphopeptide.
Protein Sci., 25, 2016
5BXY
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BU of 5bxy by Molmil
Crystal structure of RNA methyltransferase from Salinibacter ruber in complex with S-Adenosyl-L-homocysteine
分子名称: CHLORIDE ION, MAGNESIUM ION, RNA methyltransferase, ...
著者Handing, K.B, LaRowe, C, Shabalin, I.G, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-06-09
公開日2015-07-01
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of RNA methylase family protein from Salinibacterruber in complex with S-Adenosyl-L-homocysteine.
to be published
1AVF
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BU of 1avf by Molmil
ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH
分子名称: GASTRICSIN, SODIUM ION
著者Khan, A.R, Cherney, M.M, Tarasova, N.I, James, M.N.G.
登録日1997-09-16
公開日1998-02-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural characterization of activation 'intermediate 2' on the pathway to human gastricsin.
Nat.Struct.Biol., 4, 1997
1DCA
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BU of 1dca by Molmil
STRUCTURE OF AN ENGINEERED METAL BINDING SITE IN HUMAN CARBONIC ANHYDRASE II REVEALS THE ARCHITECTURE OF A REGULATORY CYSTEINE SWITCH
分子名称: CARBONIC ANHYDRASE II, ZINC ION
著者Ippolito, J.A, Christianson, D.W.
登録日1992-12-18
公開日1993-07-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of an engineered His3Cys zinc binding site in human carbonic anhydrase II.
Biochemistry, 32, 1993
1DCB
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BU of 1dcb by Molmil
STRUCTURE OF AN ENGINEERED METAL BINDING SITE IN HUMAN CARBONIC ANHYDRASE II REVEALS THE ARCHITECTURE OF A REGULATORY CYSTEINE SWITCH
分子名称: CARBONIC ANHYDRASE II, ZINC ION
著者Ippolito, J.A, Christianson, D.W.
登録日1993-03-10
公開日1993-07-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of an engineered His3Cys zinc binding site in human carbonic anhydrase II.
Biochemistry, 32, 1993
6HRD
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BU of 6hrd by Molmil
Crystal structure of M. tuberculosis FadB2 (Rv0468)
分子名称: 3-hydroxybutyryl-CoA dehydrogenase, GLYCEROL
著者Cox, J.A.G, Besra, G.S, Futterer, K.
登録日2018-09-26
公開日2019-01-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis FadB2 implicated in mycobacterial beta-oxidation.
Acta Crystallogr D Struct Biol, 75, 2019
8ERX
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BU of 8erx by Molmil
Structure of chimeric HLA-A*11:01-A*02:01 bound to HIV-1 RT peptide
分子名称: Beta-2-microglobulin, HIV-1 RT, HLA-A*02:01
著者Florio, T.J, Ani, O, Young, M.C, Mallik, L, Sgourakis, N.G.
登録日2022-10-13
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules.
Front Immunol, 14, 2023
8ESH
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BU of 8esh by Molmil
Structure of chimeric HLA-A*02:01 bound to CMV peptide
分子名称: Beta-2-microglobulin, CMV peptide, HLA-A*02:01
著者Florio, T.J, Ani, O, Young, M.C, Mallik, L, Sgourakis, N.G.
登録日2022-10-14
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules.
Front Immunol, 14, 2023
7PXA
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BU of 7pxa by Molmil
Open-gate mycobacterium 20S CP proteasome in complex MPA - global 3D refinement
分子名称: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta
著者Jomaa, A, Kavalchuk, M, Weber-Ban, E.
登録日2021-10-08
公開日2022-01-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13, 2022
7PXC
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BU of 7pxc by Molmil
Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state A)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Jomaa, A, Kavalchuk, M, Weber-Ban, E.
登録日2021-10-08
公開日2022-01-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13, 2022
7PXD
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BU of 7pxd by Molmil
Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state B)
分子名称: AAA ATPase forming ring-shaped complexes, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Jomaa, A, Kavalchuk, M, Weber-Ban, E.
登録日2021-10-08
公開日2022-01-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13, 2022
7Q5G
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BU of 7q5g by Molmil
LAN-DAP5 DERIVATIVE OF LANREOTIDE: L-DIAMINO PROPIONIC ACID IN POSITION 5 IN PLACE OF L-LYSINE
分子名称: ETHANOL, LAN-DAP5 DERIVATIVE OF LANREOTIDE
著者Bressanelli, S, Le Du, M.H, Gobeaux, F, Legrand, P, Paternostre, M.
登録日2021-11-03
公開日2022-02-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献Atomic structure of Lanreotide nanotubes revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
6HU7
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BU of 6hu7 by Molmil
phosphorylated F97L Hepatitis B core protein capsid
分子名称: Capsid protein
著者Bottcher, B, Nassal, M.
登録日2018-10-05
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Mutant Hepatitis B Core Protein Capsids with Premature Secretion Phenotype.
J. Mol. Biol., 430, 2018
5WGC
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BU of 5wgc by Molmil
propionyl-DpsC in complex with oxetane-bearing probe
分子名称: (3-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}oxetan-3-yl)acetic acid, Daunorubicin-doxorubicin polyketide synthase
著者Milligan, J.C, Ellis, B.D, White, A.R, Vanderwal, C.D, Tsai, S.C.
登録日2017-07-13
公開日2018-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献An Oxetane-Based Polyketide Surrogate To Probe Substrate Binding in a Polyketide Synthase.
J. Am. Chem. Soc., 140, 2018
5WLG
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BU of 5wlg by Molmil
Crystal Structure of H-2Db with the GAP501 peptide (SQL)
分子名称: Beta-2-microglobulin, CHLORIDE ION, GAP50 peptide, ...
著者Gras, S, Farenc, C, Josephs, T, Rossjohn, J.
登録日2017-07-26
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene.
Immunity, 47, 2017
6I9N
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BU of 6i9n by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and L-2-hydroxyglutarate
分子名称: (2S)-2-HYDROXYPENTANEDIOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2018-11-24
公開日2019-12-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.361 Å)
主引用文献Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
7Q5A
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BU of 7q5a by Molmil
Lanreotide nanotube
分子名称: Lanreotide
著者Pieri, L, Wang, F, Arteni, A.A, Bressanelli, S, Egelman, E.H, Paternostre, M.
登録日2021-11-03
公開日2022-04-06
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Atomic structure of Lanreotide nanotubes revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
6I9M
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BU of 6i9m by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and R-2-hydroxyglutarate
分子名称: (2R)-2-hydroxypentanedioic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2018-11-23
公開日2019-12-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
7Q4I
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BU of 7q4i by Molmil
Crystal structure of DmC1GalT1 in complex with UDP-Mn2+ and the APD-TGalNAc-RP
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, ...
著者Gonzalez-Ramirez, A.M, Coelho, H, Companon, I, Grosso, A.S, Yang, Z, Narimatsu, Y, Clausen, H, Marcelo, F, Corzana, F, Hurtado-Guerrero, R.
登録日2021-10-31
公開日2022-04-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the synthesis of the core 1 structure by C1GalT1.
Nat Commun, 13, 2022
5X2V
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BU of 5x2v by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase wild type without sulfate ion
分子名称: L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X2Y
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BU of 5x2y by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant without sulfate ion
分子名称: L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
6IEO
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BU of 6ieo by Molmil
Crystal structure of Mycobacterium tuberculosis HtrA1 (Rv1223) in regulated conformation
分子名称: Probable serine protease HtrA (DEGP protein), phenylmethanesulfonic acid
著者Gupta, A.K, Gopal, B.
登録日2018-09-14
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The crystal structure of Mycobacterium tuberculosis high-temperature requirement A protein reveals an autoregulatory mechanism.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5X2W
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Crystal structure of Pseudomonas putida methionine gamma-lyase wild type with L-methionine intermediates
分子名称: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid, L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X2Z
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Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-methionine intermediates
分子名称: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid, L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X94
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Crystal structure of SHP2_SH2-CagA EPIYA_D peptide complex
分子名称: Cag pathogenicity island protein, Tyrosine-protein phosphatase non-receptor type 11
著者Senda, M, Senda, T.
登録日2017-03-05
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Differential Mechanisms for SHP2 Binding and Activation Are Exploited by Geographically Distinct Helicobacter pylori CagA Oncoproteins.
Cell Rep, 20, 2017

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