Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3OK4
DownloadVisualize
BU of 3ok4 by Molmil
Crystal structure of the ANA:RNA decamer suffering from lattice translocation defects
分子名称: ANA, RNA
著者Ovaere, M, Van Meervelt, L.
登録日2010-08-24
公開日2011-11-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.149 Å)
主引用文献Crystal structure of the ANA:RNA decamer suffering from lattice translocation defects
To be Published
2VVO
DownloadVisualize
BU of 2vvo by Molmil
Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex with alpha d-allose 6-phosphate
分子名称: 6-O-phosphono-alpha-D-allopyranose, RIBOSE-5-PHOSPHATE ISOMERASE B
著者Roos, A.K, Mariano, S, Kowalinski, E, Salmon, L, Mowbray, S.L.
登録日2008-06-10
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not.
J.Mol.Biol., 382, 2008
2W3S
DownloadVisualize
BU of 2w3s by Molmil
Crystal Structure of Xanthine Dehydrogenase (desulfo form) from Rhodobacter capsulatus in Complex with Xanthine
分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dietzel, U, Kuper, J, Leimkuhler, S, Kisker, C.
登録日2008-11-14
公開日2008-12-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of Substrate and Inhibitor Binding of Rhodobacter Capsulatus Xanthine Dehydrogenase.
J.Biol.Chem., 284, 2009
3IEM
DownloadVisualize
BU of 3iem by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
分子名称: CITRATE ANION, RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3'), Ribonuclease TTHA0252, ...
著者Ishikawa, H, Nakagawa, N, Kuramitus, S, Yokoyama, S, Masui, R.
登録日2009-07-23
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
To be Published
3GR4
DownloadVisualize
BU of 3gr4 by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 1-[(2,6-difluorophenyl)sulfonyl]-4-(2,3-dihydro-1,4-benzodioxin-6-ylsulfonyl)piperazine, ADENOSINE-5'-DIPHOSPHATE, ...
著者Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
登録日2009-03-24
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Activator-Bound Structures of Human Pyruvate Kinase M2
to be published
3RG2
DownloadVisualize
BU of 3rg2 by Molmil
Structure of a two-domain NRPS fusion protein containing the EntE adenylation domain and EntB aryl-carrier protein from enterobactin biosynthesis
分子名称: 4'-PHOSPHOPANTETHEINE, 5'-deoxy-5'-({[2-(2-hydroxyphenyl)ethyl]sulfonyl}amino)adenosine, Enterobactin synthase component E (entE), ...
著者Sundlov, J.A, Gulick, A.M.
登録日2011-04-07
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and Functional Investigation of the Intermolecular Interaction between NRPS Adenylation and Carrier Protein Domains.
Chem.Biol., 19, 2012
3RL0
DownloadVisualize
BU of 3rl0 by Molmil
Truncated SNARE complex with complexin (P1)
分子名称: Complexin-1, Synaptosomal-associated protein 25, Syntaxin-1A, ...
著者Kuemmel, D, Reinisch, K.M.
登録日2011-04-19
公開日2011-07-27
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
2Q3E
DownloadVisualize
BU of 2q3e by Molmil
Structure of human UDP-glucose dehydrogenase complexed with NADH and UDP-glucose
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, UDP-glucose 6-dehydrogenase, ...
著者Kavanagh, K.L, Guo, K, Bunkoczi, G, Savitsky, P, Pilka, E, Bhatia, C, Smee, C, Berridge, G, von Delft, F, Wiegelt, J, Arrowsmith, C, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-05-30
公開日2007-07-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of human UDP-glucose 6-dehydrogenase.
J.Biol.Chem., 286, 2011
3GYX
DownloadVisualize
BU of 3gyx by Molmil
Crystal structure of adenylylsulfate reductase from Desulfovibrio gigas
分子名称: Adenylylsulfate Reductase, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER
著者Chiang, Y.-L, Hsieh, Y.-C, Liu, E.-H, Liu, M.-Y, Chen, C.-J.
登録日2009-04-06
公開日2009-12-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Adenylylsulfate reductase from Desulfovibrio gigas suggests a potential self-regulation mechanism involving the C terminus of the beta-subunit
J.Bacteriol., 191, 2009
3H1C
DownloadVisualize
BU of 3h1c by Molmil
Crystal structure of Polynucleotide Phosphorylase (PNPase) core bound to RNase E and Tungstate
分子名称: Polyribonucleotide nucleotidyltransferase, Ribonuclease E, TUNGSTATE(VI)ION
著者Nurmohamed, S.
登録日2009-04-11
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.57 Å)
主引用文献Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly
J.Mol.Biol., 389, 2009
3RSS
DownloadVisualize
BU of 3rss by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NADP
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, Putative uncharacterized protein, ...
著者Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
登録日2011-05-02
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3H0R
DownloadVisualize
BU of 3h0r by Molmil
Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASPARAGINE, ...
著者Wu, J, Bu, W, Sheppard, K, Kitabatake, M, Soll, D, Smith, J.L.
登録日2009-04-10
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3RTC
DownloadVisualize
BU of 3rtc by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NAD and ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
登録日2011-05-03
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3BP9
DownloadVisualize
BU of 3bp9 by Molmil
Structure of B-tropic MLV capsid N-terminal domain
分子名称: GLYCEROL, Gag protein, ISOPROPYL ALCOHOL
著者Gulnahar, M.B, Dodding, M.P, Goldstone, D.C, Haire, L.F, Stoye, J.P, Taylor, I.A.
登録日2007-12-18
公開日2008-02-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of B-MLV capsid amino-terminal domain reveals key features of viral tropism, gag assembly and core formation
J.Mol.Biol., 376, 2008
3GLI
DownloadVisualize
BU of 3gli by Molmil
Crystal Structure of the E. coli clamp loader bound to Primer-Template DNA and Psi Peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ...
著者Simonetta, K.R, Cantor, A.J, Kuriyan, J.
登録日2009-03-12
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
Cell(Cambridge,Mass.), 137, 2009
3GND
DownloadVisualize
BU of 3gnd by Molmil
Crystal Structure of E. coli LsrF in complex with Ribulose-5-phosphate
分子名称: Aldolase lsrF, RIBULOSE-5-PHOSPHATE
著者Miller, S.T, Diaz, Z.C.
登録日2009-03-17
公開日2009-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
3R2J
DownloadVisualize
BU of 3r2j by Molmil
Crystal Structure of PnC1 from L. infantum in complex with nicotinate
分子名称: Alpha/beta-hydrolase-like protein, CHLORIDE ION, NICOTINIC ACID, ...
著者Gazanion, E, Garcia, D, Guichou, J.-F, Labesse, G, Sereno, D, Vergnes, B.
登録日2011-03-14
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献The Leishmania nicotinamidase is essential for NAD(+) production and parasite proliferation.
Mol.Microbiol., 82, 2011
3BO7
DownloadVisualize
BU of 3bo7 by Molmil
Crystal structure of Toxoplasma gondii peptidyl-prolyl cis-trans isomerase, 541.m00136
分子名称: 1,2-ETHANEDIOL, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYCLOPHILIN-TYPE, ...
著者Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Artz, J.D, Xiao, T, Structural Genomics Consortium (SGC)
登録日2007-12-17
公開日2008-02-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Toxoplasma Gondii Peptidyl-Prolyl Cis-Trans Isomerase, 541.M00136.
To be Published
3C3Q
DownloadVisualize
BU of 3c3q by Molmil
ALIX Bro1-domain:CHMIP4B co-crystal structure
分子名称: Charged multivesicular body protein 4b peptide, GLYCEROL, Programmed cell death 6-interacting protein
著者McCullough, J.B, Fisher, R.D, Whitby, F.G, Sundquist, W.I, Hill, C.P.
登録日2008-01-28
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ALIX-CHMP4 interactions in the human ESCRT pathway.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3C44
DownloadVisualize
BU of 3c44 by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycin
分子名称: CHLORIDE ION, HIV-1 subtype F genomic RNA, PAROMOMYCIN, ...
著者Freisz, S, Ennifar, E, Dumas, P.
登録日2008-01-29
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
2QC8
DownloadVisualize
BU of 2qc8 by Molmil
Crystal structure of human glutamine synthetase in complex with ADP and methionine sulfoximine phosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Glutamine synthetase, ...
著者Karlberg, T, Lehtio, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hogbom, M, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2007-06-19
公開日2007-07-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of mammalian glutamine synthetases illustrate substrate-induced conformational changes and provide opportunities for drug and herbicide design.
J.Mol.Biol., 375, 2008
3PW3
DownloadVisualize
BU of 3pw3 by Molmil
Crystal structure of a cysteine protease (BDI_2249) from Parabacteroides distasonis ATCC 8503 at 2.23 A resolution
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aminopeptidase C, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-12-07
公開日2010-12-22
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structure of a cysteine protease (BDI_2249) from Parabacteroides distasonis ATCC 8503 at 2.23 A resolution
To be published
3BVF
DownloadVisualize
BU of 3bvf by Molmil
Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
分子名称: FE (III) ION, Ferritin, GLYCEROL, ...
著者Kim, K.H, Cho, K.J, Lee, J.H, Shin, H.J, Yang, I.S.
登録日2008-01-07
公開日2009-01-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
To be Published
3U12
DownloadVisualize
BU of 3u12 by Molmil
The pleckstrin homology (PH) domain of USP37
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
著者Dong, A, Nair, U.B, Wernimont, A, Walker, J.R, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2011-09-29
公開日2011-11-09
最終更新日2012-05-02
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The pleckstrin homology (PH) domain of USP37
To be Published
3PCD
DownloadVisualize
BU of 3pcd by Molmil
PROTOCATECHUATE 3,4-DIOXYGENASE Y447H MUTANT
分子名称: BETA-MERCAPTOETHANOL, CARBONATE ION, FE (III) ION, ...
著者Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
登録日1997-11-24
公開日1998-05-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The axial tyrosinate Fe3+ ligand in protocatechuate 3,4-dioxygenase influences substrate binding and product release: evidence for new reaction cycle intermediates.
Biochemistry, 37, 1998

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon