PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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8G9J	Geometrically programmable nanomaterial construction using regularized protein building blocks 分子名称: THR1 著者 Huddy, T, Bera, A.K, Baker, D. 登録日 2023-02-21 公開日 2024-03-13 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024
6YXY	State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate 分子名称: 12S ribosomal RNA, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N. 登録日 2020-05-04 公開日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis. Mol.Cell, 79, 2020
8AED	Broadly neutralizing DARPin bnD.9 in complex with the HIV-1 envelope variable loop 3 peptide V3 (BG505) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Broadly neutralizing DARPin bnD.9, ... 著者 Mittl, P, Gloegl, M. 登録日 2022-07-13 公開日 2023-08-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization. Nat.Struct.Mol.Biol., 30, 2023
8BAO	Dysgonamonadaceae bacterium CRISPR ancillary nuclease 2 分子名称: BROMIDE ION, Cyclic tetra-adenylate (cA4), DUF1887 family protein, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2022-10-11 公開日 2022-11-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Reverse transcriptases prime DNA synthesis. Nucleic Acids Res., 51, 2023
8HNJ	Domain-stabilized glutamine-binding protein 分子名称: GLUTAMINE, Glutamine ABC transporter, periplasmic glutamine-binding protein GlnH 著者 Choi, S.H, Park, J.H, Seo, M.H, Park, K.W, Lee, W.K. 登録日 2022-12-08 公開日 2023-07-19 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Domain-wise dissection of thermal stability enhancement in multidomain proteins. Int.J.Biol.Macromol., 237, 2023
5KNG	CRYSTAL STRUCTURE OF ANTI-IL-13 DARPIN 6G9 分子名称: DARPIN 6G9, GLYCEROL, PHOSPHATE ION 著者 Teplyakov, A, Malia, T, Obmolova, G, Gilliland, G. 登録日 2016-06-28 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Conformational flexibility of an anti-IL-13 DARPin. Protein Eng. Des. Sel., 30, 2017
8BWW	Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs 分子名称: Thrombin light chain 著者 Diehl, C. 登録日 2022-12-07 公開日 2023-09-06 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs. Nat Commun, 14, 2023
6WXM	X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 16-36 分子名称: Amyloid-beta protein, HEXANE-1,6-DIOL 著者 Kreutzer, A.G, Nowick, J.S. 登録日 2020-05-11 公開日 2020-07-08 最終更新日 2020-08-26 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray Crystallography Reveals Parallel and Antiparallel beta-Sheet Dimers of a beta-Hairpin Derived from A beta16-36that Assemble to Form Different Tetramers. Acs Chem Neurosci, 11, 2020
8B45	Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 分子名称: 1,2-ETHANEDIOL, CC-Tri-(UbUc)4, SODIUM ION, ... 著者 Kumar, P, Martin, F.J.O, Dawson, W.M, Zieleniewski, F, Woolfson, D.N. 登録日 2022-09-19 公開日 2023-09-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 To Be Published
7B4V	Broadly neutralizing DARPin bnD.2 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505) 分子名称: Broadly neutralizing DARPin bnD.2, CHLORIDE ION, HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505), ... 著者 Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A. 登録日 2020-12-02 公開日 2021-11-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization. Nat Commun, 12, 2021
7B4W	Broadly neutralizing DARPin bnD.3 in complex with the HIV-1 envelope variable loop 3 crown mimetic peptide V3-IF (BG505) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Broadly neutralizing DARPin bnD.3, ... 著者 Friedrich, N, Stiegeler, E, Glogl, M, Lemmin, T, Hansen, S, Kadelka, C, Wu, Y, Ernst, P, Maliqi, L, Foulkes, C, Morin, M, Eroglu, M, Liechti, T, Ivan, B, Reinberg, T, Schaefer, J, Karakus, U, Ursprung, S, Mann, A, Rusert, P, Kouyos, R.D, Robinson, J.A, Gunthard, H.F, Pluckthun, A, Trkola, A. 登録日 2020-12-02 公開日 2021-11-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization. Nat Commun, 12, 2021
8G9K	Geometrically programmable nanomaterial construction using regularized protein building blocks 分子名称: THR2 著者 Bera, A.K, Huddy, T, Baker, D, Kang, A. 登録日 2023-02-21 公開日 2024-03-13 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024
5KNH	CRYSTAL STRUCTURE OF DARPIN 6G9 IN COMPLEX WITH CYNO IL-13 分子名称: ACETATE ION, DARPIN 6G9, IL13 著者 Teplyakov, A, Malia, T, Obmolova, G, Gilliland, G. 登録日 2016-06-28 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Conformational flexibility of an anti-IL-13 DARPin. Protein Eng. Des. Sel., 30, 2017
8BU0	Crystal structure of an 8 repeat consensus TPR superhelix with calcium 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Liutkus, M, Rojas, A.L, Cortajarena, A.L. 登録日 2022-11-30 公開日 2023-12-13 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Diverse crystalline protein scaffolds through metal-dependent polymorphism. Protein Sci., 33, 2024
8FWD	Fast and versatile sequence- independent protein docking for nanomaterials design using RPXDock 分子名称: O43-rpxdoc-EK1_A, O43-rpxdoc-EK1_B 著者 Skotheim, R, Borst, A.J, Baker, D. 登録日 2023-01-20 公開日 2023-05-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.67 Å) 主引用文献 Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock. Plos Comput.Biol., 19, 2023
6WSJ	Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopeptide des4.3.1 分子名称: 1,2-ETHANEDIOL, Hdac6 protein, POTASSIUM ION, ... 著者 Watson, P.R, Christianson, D.W. 登録日 2020-05-01 公開日 2021-04-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites. Nat Commun, 12, 2021
8B9Y	Cysteine Synthase from Trypanosoma cruzi with PLP and OAS 分子名称: Cysteine synthase, putative, GLYCEROL, ... 著者 Sowerby, K.V, Pohl, E. 登録日 2022-10-10 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8B9W	Cysteine Synthase from Trypanosoma theileri with PLP bound 分子名称: CHLORIDE ION, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Sowerby, K.V, Pohl, E. 登録日 2022-10-10 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8B9M	Cysteine Synthase from Leishmania Infantum 分子名称: CHLORIDE ION, Cysteine synthase, GLYCEROL 著者 Sowerby, K.V, Pohl, E. 登録日 2022-10-06 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8BGJ	Crystal structure of Reverse Transcriptase domain from Caloramator australicus CART-CAPP 分子名称: L(+)-TARTARIC ACID, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2022-10-27 公開日 2023-06-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Reverse transcriptases prime DNA synthesis. Nucleic Acids Res., 51, 2023
8CHY	Crystal structure of an 8-repeat consensus TPR superhelix with Zinc. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ... 著者 Liutkus, M, Rojas, A.L, Cortajarena, A.L. 登録日 2023-02-08 公開日 2024-02-21 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Diverse crystalline protein scaffolds through metal-dependent polymorphism. Protein Sci., 33, 2024
8CH0	Crystal structure of an 8-repeat consensus TPR superhelix with Gadolinium. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Consensus tetratricopeptide repeat protein, ... 著者 Liutkus, M, Rojas, A.L, Cortajarena, A.L. 登録日 2023-02-06 公開日 2024-02-21 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Diverse crystalline protein scaffolds through metal-dependent polymorphism. Protein Sci., 33, 2024
8CIG	Crystal structure of an 8-repeat consensus TPR superhelix in tris Buffer with Calcium. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... 著者 Liutkus, M, Rojas, A.L, Cortajarena, A.L. 登録日 2023-02-09 公開日 2024-02-21 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Diverse crystalline protein scaffolds through metal-dependent polymorphism. Protein Sci., 33, 2024
5H79	Crystal structure of a repeat protein with three Protein A repeat module 分子名称: Immunoglobulin G-binding protein A 著者 Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O. 登録日 2016-11-17 公開日 2017-06-28 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Construction of novel repeat proteins with rigid and predictable structures using a shared helix method. Sci Rep, 7, 2017
5H7B	Crystal structure of a repeat protein with five Protein A repeat modules 分子名称: Immunoglobulin G-binding protein A 著者 Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O. 登録日 2016-11-17 公開日 2017-06-28 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Construction of novel repeat proteins with rigid and predictable structures using a shared helix method. Sci Rep, 7, 2017

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