Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GRU
DownloadVisualize
BU of 6gru by Molmil
Crystal structure of human NUDT5
分子名称: 1,2-ETHANEDIOL, ADP-sugar pyrophosphatase, CHLORIDE ION, ...
著者Dubianok, Y, Collins, P, Krojer, T, Fairhead, M, MacLean, E, Diaz Saez, L, Strain-Damerell, C, Elkins, J, Burgess-Brown, N, Bountra, C, Arrowsmith, C.H, Edwards, A, Huber, K, von Delft, F, Structural Genomics Consortium (SGC)
登録日2018-06-12
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal structure of human NUDT5
To Be Published
6E94
DownloadVisualize
BU of 6e94 by Molmil
Crystal Structure of ZBTB38 C-terminal Zinc Fingers 6-9 K1055R in complex with methylated DNA
分子名称: DNA (5'-D(*GP*CP*AP*CP*TP*CP*AP*TP*(DCM)P*GP*GP*(DCM)P*GP*CP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*GP*(DCM)P*GP*CP*(DCM)P*GP*AP*TP*GP*AP*GP*TP*GP*C)-3'), ZINC ION, ...
著者Hudson, N.O, Whitby, F.G, Buck-Koehntop, B.A.
登録日2018-07-31
公開日2018-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.594 Å)
主引用文献Structural insights into methylated DNA recognition by the C-terminal zinc fingers of the DNA reader protein ZBTB38.
J. Biol. Chem., 293, 2018
6GZL
DownloadVisualize
BU of 6gzl by Molmil
Complex between the dynein light chain DYNLL1/DLC8 and a peptide from the large myelin-associated glycoprotein L-MAG
分子名称: CHLORIDE ION, Dynein light chain 1, cytoplasmic, ...
著者Myllykoski, M, Kursula, P.
登録日2018-07-04
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献High-affinity heterotetramer formation between the large myelin-associated glycoprotein and the dynein light chain DYNLL1.
J. Neurochem., 147, 2018
6GZJ
DownloadVisualize
BU of 6gzj by Molmil
Complex between the dynein light chain DYNLL1/DLC8 and the specific domain of large myelin-associated glycoprotein L-MAG
分子名称: CHLORIDE ION, Dynein light chain 1, cytoplasmic, ...
著者Myllykoski, M, Kursula, P.
登録日2018-07-04
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.977 Å)
主引用文献High-affinity heterotetramer formation between the large myelin-associated glycoprotein and the dynein light chain DYNLL1.
J. Neurochem., 147, 2018
6H52
DownloadVisualize
BU of 6h52 by Molmil
Crystal structure of human KDM5B in complex with compound 34g
分子名称: 1,2-ETHANEDIOL, 8-[4-(1-cyclopentylpiperidin-4-yl)pyrazol-1-yl]-3~{H}-pyrido[3,4-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, ...
著者Le Bihan, Y.V, Velupillai, S, van Montfort, R.L.M.
登録日2018-07-23
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献C8-substituted pyrido[3,4-d]pyrimidin-4(3H)-ones: Studies towards the identification of potent, cell penetrant Jumonji C domain containing histone lysine demethylase 4 subfamily (KDM4) inhibitors, compound profiling in cell-based target engagement assays.
Eur.J.Med.Chem., 177, 2019
6H54
DownloadVisualize
BU of 6h54 by Molmil
CRYSTAL STRUCTURE OF BOVINE HSC70(AA1-554)E213A/D214A IN COMPLEX WITH INHIBITOR VER155008
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-[[(2R,3S,4R,5R)-5-[6-amino-8-[(3,4-dichlorophenyl)methylamino]purin-9-yl]-3,4-dihydroxy-oxolan-2-yl]methoxymethyl]benzonitrile, GLYCEROL, ...
著者Plank, C, Zehe, M, Grimm, C, Sotriffer, C.
登録日2018-07-23
公開日2019-08-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Combined In-Solution Fragment Screening and Crystallographic Binding-Mode Analysis with a Two-Domain Hsp70 Construct.
Acs Chem.Biol., 2024
6H51
DownloadVisualize
BU of 6h51 by Molmil
Crystal structure of human KDM5B in complex with compound 34f
分子名称: 1,2-ETHANEDIOL, 8-[4-[1-(cyclobutylmethyl)piperidin-4-yl]pyrazol-1-yl]-3~{H}-pyrido[3,4-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, ...
著者Le Bihan, Y.V, Velupillai, S, van Montfort, R.L.M.
登録日2018-07-23
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献C8-substituted pyrido[3,4-d]pyrimidin-4(3H)-ones: Studies towards the identification of potent, cell penetrant Jumonji C domain containing histone lysine demethylase 4 subfamily (KDM4) inhibitors, compound profiling in cell-based target engagement assays.
Eur.J.Med.Chem., 177, 2019
2JHY
DownloadVisualize
BU of 2jhy by Molmil
CRYSTAL STRUCTURE OF RHOGDI E155H, E157H MUTANT
分子名称: RHO GDP-DISSOCIATION INHIBITOR 1
著者Cooper, D.R, Zawadzki, M, Derewenda, Z.S.
登録日2007-02-23
公開日2007-05-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Protein Crystallization by Surface Entropy Reduction: Optimization of the Ser Strategy
Acta Crystallogr.,Sect.D, 63, 2007
7A09
DownloadVisualize
BU of 7a09 by Molmil
Structure of a human ABCE1-bound 43S pre-initiation complex - State III
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Kratzat, H, Mackens-Kiani, T, Ameismeier, A, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-08-07
公開日2020-10-14
最終更新日2021-01-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes.
Embo J., 40, 2021
7AAC
DownloadVisualize
BU of 7aac by Molmil
Crystal structure of the catalytic domain of human PARP1 in complex with veliparib
分子名称: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, Poly [ADP-ribose] polymerase 1, SULFATE ION
著者Schimpl, M, Ogden, T.E.H, Yang, J.-C, Easton, L.E, Underwood, E, Rawlins, P.B, Johannes, J.W, Embrey, K.J, Neuhaus, D.
登録日2020-09-04
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.593 Å)
主引用文献Dynamics of the HD regulatory subdomain of PARP-1; substrate access and allostery in PARP activation and inhibition.
Nucleic Acids Res., 49, 2021
6ZZR
DownloadVisualize
BU of 6zzr by Molmil
The Crystal Structure of human LDHA from Biortus.
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-lactate dehydrogenase A chain
著者Wang, F, Lin, D, Cheng, W, Bao, X, Zhu, B, Shang, H.
登録日2020-08-05
公開日2020-08-19
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Crystal Structure of human LDHA from Biortus
To Be Published
7AAD
DownloadVisualize
BU of 7aad by Molmil
Crystal structure of the catalytic domain of human PARP1 in complex with olaparib
分子名称: 4-(3-{[4-(cyclopropylcarbonyl)piperazin-1-yl]carbonyl}-4-fluorobenzyl)phthalazin-1(2H)-one, Poly [ADP-ribose] polymerase 1, SULFATE ION
著者Schimpl, M, Ogden, T.E.H, Yang, J.-C, Easton, L.E, Underwood, E, Rawlins, P.B, Johannes, J.W, Embrey, K.J, Neuhaus, D.
登録日2020-09-04
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Dynamics of the HD regulatory subdomain of PARP-1; substrate access and allostery in PARP activation and inhibition.
Nucleic Acids Res., 49, 2021
2JRS
DownloadVisualize
BU of 2jrs by Molmil
Solution NMR Structure of CAPER RRM2 Domain. Northeast Structural Genomics Target HR4730A
分子名称: RNA-binding protein 39
著者Rossi, P, Zhao, L, Nwosu, C, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-28
公開日2007-09-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of CAPER RRM2 Domain.
To be Published
8IJU
DownloadVisualize
BU of 8iju by Molmil
ATP-dependent RNA helicase DDX39A (URH49delta41)
分子名称: 1,2-ETHANEDIOL, ATP-dependent RNA helicase DDX39A, PHOSPHATE ION, ...
著者Mikami, B, Fujita, K, Masuda, S, Kojima, M.
登録日2023-02-28
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural differences between the closely related RNA helicases, UAP56 and URH49, fashion distinct functional apo-complexes.
Nat Commun, 15, 2024
8INL
DownloadVisualize
BU of 8inl by Molmil
LSD1 in complex with S2172
分子名称: 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Niwa, H, Sato, S, Umehara, T.
登録日2023-03-10
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献LSD1 in complex with S2172
To Be Published
7PPJ
DownloadVisualize
BU of 7ppj by Molmil
human SLFN5
分子名称: Schlafen family member 5, ZINC ION
著者Lammens, K, Metzner, F.J.
登録日2021-09-14
公開日2022-01-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structural and biochemical characterization of human Schlafen 5.
Nucleic Acids Res., 50, 2022
2JY8
DownloadVisualize
BU of 2jy8 by Molmil
NMR structure of the ubiquitin associated (UBA) domain of p62 (SQSTM1) in complex with ubiquitin. RDC refined
分子名称: Ubiquitin-binding protein p62
著者Long, J.E, Layfield, R, Searle, M.S.
登録日2007-12-07
公開日2007-12-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Ubiquitin Recognition by the Ubiquitin-associated Domain of p62 Involves a Novel Conformational Switch
J.Biol.Chem., 283, 2008
7Q3Z
DownloadVisualize
BU of 7q3z by Molmil
DNA/RNA binding protein
分子名称: SODIUM ION, Schlafen family member 5, ZINC ION
著者Huber, E, Lammens, K.
登録日2021-10-29
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical characterization of human Schlafen 5.
Nucleic Acids Res., 50, 2022
7ABT
DownloadVisualize
BU of 7abt by Molmil
Structure of PPIA in complex with PR dipeptide repeat
分子名称: PRO-ARG-PRO-ARG-PRO-ARG-PRO-ARG, Peptidyl-prolyl cis-trans isomerase A
著者Babu, M, Zweckstetter, M, Becker, S.
登録日2020-09-08
公開日2021-06-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Proline/arginine dipeptide repeat polymers derail protein folding in amyotrophic lateral sclerosis.
Nat Commun, 12, 2021
8ITV
DownloadVisualize
BU of 8itv by Molmil
KL2.1 in complex with CRM1-Ran-RanBP1
分子名称: (3~{S},5~{R},6~{E},8~{Z},10~{R},12~{E},14~{E},16~{S})-3,16-bis(azanyl)-8,10,12-trimethyl-16-[(2~{S},4~{R},5~{S},6~{S})-5-methyl-4-oxidanyl-6-[(~{E})-prop-1-enyl]oxan-2-yl]-5-oxidanyl-hexadeca-6,8,12,14-tetraenoic acid, ACETATE ION, CHLORIDE ION, ...
著者Sun, Q, Jian, L.
登録日2023-03-23
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献KL2.1 in complex with CRM1-Ran-RanBP1
To Be Published
7PKR
DownloadVisualize
BU of 7pkr by Molmil
Vault structure in primmed conformation
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-26
公開日2022-03-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
6ZWK
DownloadVisualize
BU of 6zwk by Molmil
Crystal structure of the phosphorylated C-terminal tail of histone H2AX in complex with a specific nanobody (C6 gammaXbody)
分子名称: CHLORIDE ION, Histone H2AX, SODIUM ION, ...
著者McEwen, A.G, Moeglin, E, Desplancq, D, Weiss, E, Poterszman, A.
登録日2020-07-28
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A Novel Nanobody Precisely Visualizes Phosphorylated Histone H2AX in Living Cancer Cells under Drug-Induced Replication Stress.
Cancers (Basel), 13, 2021
7PKZ
DownloadVisualize
BU of 7pkz by Molmil
Vault structure in committed conformation
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-27
公開日2022-03-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
7PKY
DownloadVisualize
BU of 7pky by Molmil
Half-vault structure
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-27
公開日2022-03-23
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
8IDA
DownloadVisualize
BU of 8ida by Molmil
Overall structure of the LAT1-4F2hc bound with tyrosine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 1, ...
著者Yan, R.H, Li, Y.N, Shi, T.H.
登録日2023-02-12
公開日2024-07-10
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Overall structure of the LAT1-4F2hc bound with tyrosine
To Be Published

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon