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8T2A
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Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-05
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
To Be Published
8T29
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Crystal structure of SCV PTE RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-05
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Crystal structure of SCV PTE RNA in complex with Fab BL3-6
To Be Published
8T28
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BU of 8t28 by Molmil
The crystal structure of SrtC2 sortase from Actinomyces oris
分子名称: CHLORIDE ION, Class C sortase, PHOSPHATE ION
著者Osipiuk, J, Chang, C, Ton-That, H.L, Ton-That, H, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2023-06-05
公開日2024-04-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase.
J.Biol.Chem., 300, 2024
8T27
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BU of 8t27 by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352) D219A mutant bound to 6'-Sialyllactose (only Neu5Ac visible)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, N-acetyl-alpha-neuraminic acid, ...
著者Clark, N.D, Malkowski, M.G.
登録日2023-06-05
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
8T26
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BU of 8t26 by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352) D219A mutant bound to 3'-Sialyllactose (only Neu5Ac visible)
分子名称: DI(HYDROXYETHYL)ETHER, N-acetyl-alpha-neuraminic acid, Sialidase, ...
著者Clark, N.D, Malkowski, M.G.
登録日2023-06-05
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
8T25
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BU of 8t25 by Molmil
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at downRBD conformation.
分子名称: Angiotensin-converting enzyme, Spike glycoprotein
著者Ahn, H.M, Calderon, B, Fan, X, Gao, Y, Horgan, N, Zhou, B, Liang, B.
登録日2023-06-05
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2.
J Med Virol, 95, 2023
8T24
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BU of 8t24 by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352)- Fructose bound in CBM
分子名称: CITRATE ANION, D-fructose, DI(HYDROXYETHYL)ETHER, ...
著者Clark, N.D, Malkowski, M.G.
登録日2023-06-05
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
8T23
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BU of 8t23 by Molmil
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at upRBD conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Ahn, H.M, Calderon, B, Fan, X, Gao, Y, Horgan, N, Zhou, B, Liang, B.
登録日2023-06-05
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2.
J Med Virol, 95, 2023
8T22
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BU of 8t22 by Molmil
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to one mink ACE2 receptors at downRBD conformation
分子名称: Angiotensin-converting enzyme, Spike glycoprotein
著者Ahn, H.M, Calderon, B, Fan, X, Gao, Y, Horgan, N, Zhou, B, Liang, B.
登録日2023-06-05
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.83 Å)
主引用文献Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2.
J Med Virol, 95, 2023
8T21
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BU of 8t21 by Molmil
Cryo-EM structure of mink variant Y453F trimeric spike protein
分子名称: Spike glycoprotein
著者Ahn, H.M, Calderon, B, Fan, X, Gao, Y, Horgan, N, Zhou, B, Liang, B.
登録日2023-06-05
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2.
J Med Virol, 95, 2023
8T20
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BU of 8t20 by Molmil
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to two mink ACE2 receptors
分子名称: Angiotensin-converting enzyme, Spike glycoprotein
著者Ahn, H.M, Calderon, B, Fan, X, Gao, Y, Horgan, N, Zhou, B, Liang, B.
登録日2023-06-05
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural basis of the American mink ACE2 binding by Y453F trimeric spike glycoproteins of SARS-CoV-2.
J Med Virol, 95, 2023
8T1Z
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BU of 8t1z by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352) Bound to Neu5Ac (NANA)
分子名称: DI(HYDROXYETHYL)ETHER, N-acetyl-alpha-neuraminic acid, Sialidase, ...
著者Clark, N.D, Malkowski, M.G.
登録日2023-06-05
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
8T1Y
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BU of 8t1y by Molmil
Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352) Bound to Neu5Ac2en (DANA)
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, DI(HYDROXYETHYL)ETHER, Sialidase, ...
著者Clark, N.D, Malkowski, M.G.
登録日2023-06-05
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.
Plos Pathog., 19, 2023
8T1X
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BU of 8t1x by Molmil
T4 highly immunogenic outer capsid protein C-terminal domain bound to the vertex-proximal gp23* capsomer of the isometric head in two preferred orientations
分子名称: Highly immunogenic outer capsid protein, Mature major capsid protein gp23*
著者Fokine, A, Rao, V.B.
登録日2023-06-04
公開日2023-07-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and Function of Hoc-A Novel Environment Sensing Device Encoded by T4 and Other Bacteriophages.
Viruses, 15, 2023
8T1U
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BU of 8t1u by Molmil
Crystal structure of the DRM2-CTA DNA complex
分子名称: DNA (5'-D(P*AP*TP*TP*AP*TP*TP*AP*AP*TP*(C49)P*TP*AP*AP*AP*TP*TP*TP*A)-3'), DNA (5'-D(P*TP*AP*AP*AP*TP*TP*TP*AP*GP*AP*TP*TP*AP*AP*TP*AP*AP*T)-3'), DNA (cytosine-5)-methyltransferase DRM2, ...
著者Chen, J, Lu, J, Song, J.
登録日2023-06-03
公開日2023-11-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献DNA conformational dynamics in the context-dependent non-CG CHH methylation by plant methyltransferase DRM2.
J.Biol.Chem., 299, 2023
8T1T
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BU of 8t1t by Molmil
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA with QSY deletion) heteromeric complex (bound to SAM)
分子名称: Alpha-N-methyltransferase (SonM), RiPP precursor (SonA), S-ADENOSYLMETHIONINE, ...
著者Crone, K.K, Jomori, T, Miller, F.S, Gralnick, J, Elias, M, Freeman, M.F.
登録日2023-06-03
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献RiPP enzyme heterocomplex structure-guided discovery of a bacterial borosin alpha- N -methylated peptide natural product.
Rsc Chem Biol, 4, 2023
8T1S
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BU of 8t1s by Molmil
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA with QSY deletion) heteromeric complex (bound to SAH)
分子名称: Alpha-N-methyltransferase, Extradiol ring-cleavage dioxygenase LigAB LigA subunit domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Crone, K.K, Jomori, T, Miller, F.S, Gralnick, J, Elias, M, Freeman, M.F.
登録日2023-06-03
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献RiPP enzyme heterocomplex structure-guided discovery of a bacterial borosin alpha- N -methylated peptide natural product.
Rsc Chem Biol, 4, 2023
8T1R
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BU of 8t1r by Molmil
Crystal structure of human CPSF73 catalytic segment in complex with compound 2
分子名称: 3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(3-methoxyphenyl)phenyl]propanamide, CHLORIDE ION, Cleavage and polyadenylation specificity factor subunit 3, ...
著者Huang, J, Tong, L.
登録日2023-06-02
公開日2023-11-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3.
Cell Chem Biol, 31, 2024
8T1Q
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BU of 8t1q by Molmil
Crystal structure of human CPSF73 catalytic segment in complex with compound 1
分子名称: 3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(4-ethanoylphenyl)phenyl]propanamide, CHLORIDE ION, Cleavage and polyadenylation specificity factor subunit 3, ...
著者Huang, J, Tong, L.
登録日2023-06-02
公開日2023-11-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3.
Cell Chem Biol, 31, 2024
8T1P
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BU of 8t1p by Molmil
Heterodimeric ABC transporter BmrCD in the occluded conformation bound to ADPVi: BmrCD_OC-ADPVi
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, ...
著者Tang, Q, Mchaourab, H.S.
登録日2023-06-02
公開日2023-11-15
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Asymmetric conformations and lipid interactions shape the ATP-coupled cycle of a heterodimeric ABC transporter.
Nat Commun, 14, 2023
8T1O
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AP2 bound to MSP2N2 nanodisc with Tgn38 cargo peptide; composite map
分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
著者Baker, R.W, Cannon, K.S, Reta, S.
登録日2023-06-02
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Lipid nanodiscs as a template for high-resolution cryo-EM structures of peripheral membrane proteins.
J.Struct.Biol., 215, 2023
8T1N
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BU of 8t1n by Molmil
Micro-ED Structure of a Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Cannon, K.A, Rodriguez, J.A, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8T1M
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BU of 8t1m by Molmil
Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Agdanowski, M.P, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8T1K
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BU of 8t1k by Molmil
DSBU crosslinked nNOS-CaM oxygenase homodimer
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ...
著者Lee, K, Pospiech, T.H, Southworth, D.
登録日2023-06-02
公開日2023-11-29
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry.
J.Biol.Chem., 300, 2023
8T1J
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Uncrosslinked nNOS-CaM oxygenase homodimer
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ...
著者Lee, K, Pospiech, T.H, Southworth, D.
登録日2023-06-02
公開日2023-11-29
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry.
J.Biol.Chem., 300, 2023

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件を2024-06-26に公開中

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