PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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5LO2	Engineering protein stability with atomic precision in a monomeric miniprotein 分子名称: PPaTyr 著者 Baker, E.G, Hudson, K.L, Williams, C, Bartlett, G.G, Heal, J.W, Sessions, R.B, Crump, M.P, Woolfson, D.N. 登録日 2016-08-08 公開日 2017-05-17 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Engineering protein stability with atomic precision in a monomeric miniprotein. Nat. Chem. Biol., 13, 2017
5LO3	Engineering protein stability with atomic precision in a monomeric miniprotein 分子名称: PPaOMe 著者 Baker, E.G, Hudson, K.L, Williams, C, Bartlett, G.G, Heal, J.W, Sessions, R.B, Crump, M.P, Woolfson, D.N. 登録日 2016-08-08 公開日 2017-05-17 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Engineering protein stability with atomic precision in a monomeric miniprotein. Nat. Chem. Biol., 13, 2017
6P78	queuine lyase from Clostridium spiroforme bound to SAM and queuine 分子名称: 2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, IRON/SULFUR CLUSTER, Queuine lyase, ... 著者 Almo, S.C, Grove, T.L. 登録日 2019-06-05 公開日 2019-09-18 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (1.726 Å) 主引用文献 Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens. Proc.Natl.Acad.Sci.USA, 116, 2019
1I9F	STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE 分子名称: REV RESPONSE ELEMENT RNA, RSG-1.2 PEPTIDE 著者 Zhang, Q, Harada, K, Cho, H.S, Frankel, A, Wemmer, D.E. 登録日 2001-03-19 公開日 2001-05-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural characterization of the complex of the Rev response element RNA with a selected peptide. Chem.Biol., 8, 2001
6CFE	Crystal structure of C2S5: A computationally designed immunogen to target Carbohydrate-Occluded Epitopes on the HIV envelope 分子名称: Mutant of Apolipoprotein E3 (APO-E3) 著者 Zhu, C, Ke, H.M, Swanstrom, R, Dokholyan, N.V. 登録日 2018-02-14 公開日 2019-02-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.994 Å) 主引用文献 Rationally designed carbohydrate-occluded epitopes elicit HIV-1 Env-specific antibodies. Nat Commun, 10, 2019
8B6N	X-ray structure of the haloalkane dehalogenase HaloTag7 circular permutated at positions 141-156 (cpHaloTagDelta) 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Haloalkane dehalogenase 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2022-09-27 公開日 2023-10-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Recording physiological history of cells with chemical labeling. Science, 383, 2024
8B6P	X-ray structure of the haloalkane dehalogenase HaloTag7 circular permutated at positions 154-156 (cpHaloTag7_154-156) 分子名称: CHLORIDE ION, Haloalkane dehalogenase 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2022-09-27 公開日 2023-10-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Recording physiological history of cells with chemical labeling. Science, 383, 2024
6QAM	Solution NMR structure of outer membrane protein AlkL 分子名称: Outer membrane protein AlkL 著者 Schubeis, T, Andreas, L.B, Pintacuda, G. 登録日 2018-12-19 公開日 2020-01-15 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 A beta-barrel for oil transport through lipid membranes: Dynamic NMR structures of AlkL. Proc.Natl.Acad.Sci.USA, 117, 2020
1GX5	Hepatitis C Virus RNA Polymerase in Complex with GTP and Manganese 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE 著者 Bressanelli, S, Rey, F.A. 登録日 2002-03-27 公開日 2002-04-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A Structural Analysis of the Hepatitis C Virus RNA Polymerase in Complex with Ribonucleotides J.Virol., 76, 2002
5EMS	Crystal Structure of an iodinated insulin analog 分子名称: CHLORIDE ION, Insulin, PHENOL, ... 著者 Lawrence, M.C, Pandyarajan, V, Wan, Z, Weiss, M.A. 登録日 2015-11-06 公開日 2016-11-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Extending Halogen-based Medicinal Chemistry to Proteins: IODO-INSULIN AS A CASE STUDY. J. Biol. Chem., 291, 2016
1GX6	Hepatitis C Virus RNA polymerase in complex with UTP and manganese 分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE, URIDINE 5'-TRIPHOSPHATE 著者 Bressanelli, S, Rey, F.A. 登録日 2002-03-27 公開日 2002-04-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A Structural Analysis of the Hepatitis C Virus RNA Polymerase in Complex with Ribonucleotides J.Virol., 76, 2002
2XWH	HCV-J6 NS5B polymerase structure at 1.8 Angstrom 分子名称: DI(HYDROXYETHYL)ETHER, POLYETHYLENE GLYCOL (N=34), RNA DEPENDENT RNA POLYMERASE 著者 Scrima, N, Bressanelli, S. 登録日 2010-11-03 公開日 2011-01-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A Comprehensive Structure-Function Comparison of Hepatitis C Virus Strains Jfh1 and J6 Polymerases Reveals a Key Residue Stimulating Replication in Cell Culture Across Genotypes. J.Virol., 85, 2011
7YH8	Crystal structure of a heterochiral protein complex 分子名称: D-Pep-1, L-19437 著者 Liang, M, Li, S, Wang, T, Liu, L, Lu, P. 登録日 2022-07-13 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of a heterochiral protein complex To Be Published
8TW0	Crystal Structure of a synthetic ABC heterotrimeric Collagen-like Peptide at 1.53 A 分子名称: Collagen Mimetic Peptide A, Collagen Mimetic Peptide B, Collagen Mimetic Peptide C, ... 著者 Miller, M.D, Cole, C.C, Xu, W, Walker, D.R, Hulgan, S.A.H, Pogostin, B.H, Swain, J.W.R, Duella, R, Misiura, M, Wang, X, Kolomeisky, A.B, Phillips Jr, G.N, Hartgerink, J.D. 登録日 2023-08-18 公開日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Heterotrimeric Collagen Helix with High Specificity of Assembly Results in a Rapid Rate of Folding Nat.Chem., 2024
8TQM	Cryo-EM structure of E3 ubiquitin ligase Doa10 from Saccharomyces cerevisiae 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ERAD-associated E3 ubiquitin-protein ligase DOA10, ... 著者 Park, E, Itskanov, S.I. 登録日 2023-08-07 公開日 2024-03-13 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10. Nat Commun, 15, 2024
8UBZ	Choline-bound FLVCR1 分子名称: CHOLESTEROL HEMISUCCINATE, CHOLINE ION, Heme transporter FLVCR1 著者 Hite, R.K, Son, Y. 登録日 2023-09-25 公開日 2024-03-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. Nature, 629, 2024
8TQS	Complex of human thrombin (S195A) bound to a bivalent inhibitor comprised of DNA Aptamer HD22 conjugated to Dabigatran with a linker. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (30-MER), ... 著者 Krishnaswamy, S, Kumar, S. 登録日 2023-08-08 公開日 2024-05-01 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.207 Å) 主引用文献 Aptameric hirudins as selective and reversible EXosite-ACTive site (EXACT) inhibitors. Nat Commun, 15, 2024
8UBX	Ethanolamine-bound FLVCR1 分子名称: CHOLESTEROL HEMISUCCINATE, ETHANOLAMINE, Heme transporter FLVCR1 著者 Hite, R.K, Son, Y. 登録日 2023-09-25 公開日 2024-03-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. Nature, 629, 2024
8WOW	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, I160L/G233A mutant 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, UDP-glucose 4-epimerase 2, ... 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-08 公開日 2024-05-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
8UBY	Choline-bound FLVCR1 分子名称: CHOLESTEROL HEMISUCCINATE, CHOLINE ION, Heme transporter FLVCR1 著者 Hite, R.K, Son, Y. 登録日 2023-09-25 公開日 2024-03-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.67 Å) 主引用文献 Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. Nature, 629, 2024
8UC0	Endogenous ligand bound FLVCR1 分子名称: CHOLESTEROL HEMISUCCINATE, Heme transporter FLVCR1 著者 Hite, R.K, Son, Y. 登録日 2023-09-25 公開日 2024-03-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.42 Å) 主引用文献 Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. Nature, 629, 2024
8WOV	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, G233A mutant 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase 2, URIDINE-5'-DIPHOSPHATE 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-07 公開日 2024-05-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
8WOP	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, wild-type 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase 2, URIDINE-5'-DIPHOSPHATE 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-07 公開日 2024-05-08 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
8UBW	Choline-bound FLVCR1 分子名称: CHOLESTEROL HEMISUCCINATE, CHOLINE ION, Heme transporter FLVCR1 著者 Hite, R.K, Son, Y. 登録日 2023-09-25 公開日 2024-03-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1. Nature, 629, 2024
8A1A	Structure of a leucinostatin derivative determined by host lattice display : L1F11V1 construct 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-(2-methoxyethoxy)-11,15-dimethyl-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one, ... 著者 Mittl, P.R.E. 登録日 2022-06-01 公開日 2022-12-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure of a hydrophobic leucinostatin derivative determined by host lattice display. Acta Crystallogr D Struct Biol, 78, 2022

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