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2ZOH
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X-ray Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Yamaguchi, S.
登録日2008-05-20
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
3VUZ
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Crystal structure of histone methyltransferase SET7/9 in complex with AAM-1
分子名称: 5'-{[(3S)-3-amino-3-carboxypropyl](hexyl)amino}-5'-deoxyadenosine, Histone-lysine N-methyltransferase SETD7
著者Niwa, H, Handa, N, Tomabechi, Y, Honda, K, Toyama, M, Ohsawa, N, Shirouzu, M, Kagechika, H, Hirano, T, Umehara, T, Yokoyama, S.
登録日2012-07-10
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of histone methyltransferase SET7/9 in complexes with adenosylmethionine derivatives
Acta Crystallogr.,Sect.D, 69, 2013
1DUH
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CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA
分子名称: 4.5S RNA DOMAIN IV, LUTETIUM (III) ION, MAGNESIUM ION, ...
著者Jovine, L, Hainzl, T, Oubridge, C, Scott, W.G, Li, J, Sixma, T.K, Wonacott, A, Skarzynski, T, Nagai, K.
登録日2000-01-17
公開日2000-05-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the ffh and EF-G binding sites in the conserved domain IV of Escherichia coli 4.5S RNA.
Structure Fold.Des., 8, 2000
3F70
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Crystal structure of L3MBTL2-H4K20me1 complex
分子名称: Lethal(3)malignant brain tumor-like 2 protein, N-METHYL-LYSINE
著者Guo, Y, Qi, C, Allali-Hassani, A, Pan, P, Zhu, H, Dong, A, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Edwards, A.M, Weigelt, J, Bountra, C, Arrowsmith, C.H, Botchkarev, A, Read, R, Min, J, Structural Genomics Consortium (SGC)
登録日2008-11-07
公開日2009-01-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2.
Nucleic Acids Res., 37, 2009
3V7R
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Crystal structure of Staphylococcus aureus biotin protein ligase in complex with inhibitor
分子名称: (3aS,4S,6aR)-4-(5-{1-[4-(6-amino-9H-purin-9-yl)butyl]-1H-1,2,3-triazol-4-yl}pentyl)tetrahydro-1H-thieno[3,4-d]imidazol-2(3H)-one, Biotin ligase
著者Yap, M.Y, Pendini, N.R.
登録日2011-12-21
公開日2012-12-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Selective inhibition of biotin protein ligase from Staphylococcus aureus.
J.Biol.Chem., 287, 2012
3V8L
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Crystal structure of Staphylococcus aureus biotin protein ligase in complex with biotinyl-5'-AMP
分子名称: BIOTINYL-5-AMP, Biotin ligase
著者Yap, M.Y.
登録日2011-12-23
公開日2012-12-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Selective inhibition of biotin protein ligase from Staphylococcus aureus.
J.Biol.Chem., 287, 2012
2EQM
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Solution structure of the TUDOR domain of PHD finger protein 20-like 1 [Homo sapiens]
分子名称: PHD finger protein 20-like 1
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2007-10-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of PHD finger protein 20-like 1 [Homo sapiens]
To be Published
2OOL
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Crystal structure of the chromophore-binding domain of an unusual bacteriophytochrome RpBphP3 from R. palustris
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Sensor protein
著者Yang, X, Stojkovic, E.A, Kuk, J, Moffat, K.
登録日2007-01-25
公開日2007-07-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3FB9
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The crystal structure of the protein with unknown function from Streptococcus pneumoniae TIGR4
分子名称: uncharacterized protein
著者Zhang, R, Li, H, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-11-18
公開日2008-12-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of the protein with unknown function from Streptococcus pneumoniae TIGR4
To be Published
3BIY
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Crystal structure of p300 histone acetyltransferase domain in complex with a bisubstrate inhibitor, Lys-CoA
分子名称: BROMIDE ION, Histone acetyltransferase p300, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R,20R)-20-carbamoyl-3-hydroxy-2,2-dimethyl-4,8,14,22-tetraoxo-12-thia-5,9,15,21-tetraazatricos-1-yl dihydrogen diphosphate
著者Liu, X, Wang, L, Zhao, K, Thompson, P.R, Hwang, Y, Marmorstein, R, Cole, P.A.
登録日2007-12-02
公開日2008-02-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structural basis of protein acetylation by the p300/CBP transcriptional coactivator
Nature, 451, 2008
2OWJ
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Structure of an early-microsecond photolyzed state of CO-bjFixLH, dark state
分子名称: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
著者Key, J, Srajer, V, Pahl, R, Moffat, K.
登録日2007-02-16
公開日2007-06-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction.
Biochemistry, 46, 2007
2OZQ
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Crystal Structure of apo-MUP
分子名称: CADMIUM ION, Novel member of the major urinary protein (Mup) gene family, SODIUM ION
著者Dennis, C.A, Homans, S.W, Phillips, S.E.V, Syme, N.R.
登録日2007-02-27
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Origin of heat capacity changes in a "nonclassical" hydrophobic interaction.
Chembiochem, 8, 2007
1ZB9
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Crystal structure of Xylella fastidiosa organic peroxide resistance protein
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, organic hydroperoxide resistance protein
著者Oliveira, M.A, Guimaraes, B.G, Cussiol, J.R, Medrano, F.J, Vidigal, S.A, Gozzo, F.C, Netto, L.E.
登録日2005-04-07
公開日2006-04-25
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Insights into Enzyme-Substrate Interaction and Characterization of Enzymatic Intermediates of Organic Hydroperoxide Resistance Protein from Xylella fastidiosa.
J.Mol.Biol., 359, 2006
1ZCC
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Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58
分子名称: ACETATE ION, SULFATE ION, glycerophosphodiester phosphodiesterase
著者Krishnamurthy, N.R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-04-11
公開日2005-05-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit.
Proteins, 65, 2006
3W1Y
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Crystal structure of T brucei ATG8.2 in complex with E coli S10
分子名称: 30S ribosomal protein S10, Microtubule-associated protein 1A/1B, light chain 3
著者Yuan, Y.A, Wang, C.
登録日2012-11-23
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of T brucei ATG8.2
To be Published
3VE3
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Structure of IT Intermediate from time-resolved laue crystallography
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Ihee, H, Jung, Y.O.
登録日2012-01-07
公開日2013-03-20
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013
3FR2
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BU of 3fr2 by Molmil
N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte Fatty-Acid Binding Protein (A-FABP) inhibitors
分子名称: 9-benzyl-2,3,4,9-tetrahydro-1H-carbazole-8-carboxylic acid, Fatty acid-binding protein, adipocyte
著者Barf, T, Hammer, K, Lehmann, F, Haile, S, Axen, E, Medina, C, Rondahl, L, Uppenberg, J, Svensson, S, Lundb ck, T.
登録日2009-01-08
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte fatty-acid binding protein (A-FABP) inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
3FR5
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N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte Fatty-Acid Binding Protein (A-FABP) inhibitors
分子名称: 5-(3-carbamoylbenzyl)-5,6,7,8,9,10-hexahydrocyclohepta[b]indole-4-carboxylic acid, Fatty acid-binding protein, adipocyte
著者Barf, T, Hammer, K, Lehmann, F, Haile, S, Axen, E, Medina, C, Uppenberg, J, Svensson, S, Rondahl, L, Lundb ck, T.
登録日2009-01-08
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte fatty-acid binding protein (A-FABP) inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
1ZMO
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Apo structure of haloalcohol dehalogenase HheA of Arthrobacter sp. AD2
分子名称: halohydrin dehalogenase
著者de Jong, R.M, Kalk, K.H, Tang, L, Janssen, D.B, Dijkstra, B.W.
登録日2005-05-10
公開日2006-04-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The X-ray structure of the haloalcohol dehalogenase HheA from Arthrobacter sp. strain AD2: insight into enantioselectivity and halide binding in the haloalcohol dehalogenase family.
J.Bacteriol., 188, 2006
2DJ7
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Solution Structure of 3rd LIM Domain of Actin-binding LIM Protein 3
分子名称: Actin-binding LIM protein 3, ZINC ION
著者Niraula, T.N, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-31
公開日2006-10-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of 3rd LIM Domain of Actin-binding LIM Protein 3
To be Published
2PQ8
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MYST histone acetyltransferase 1
分子名称: COENZYME A, Probable histone acetyltransferase MYST1, UNKNOWN ATOM OR ION, ...
著者Tempel, W, Wu, H, Dombrovski, L, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2007-05-01
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献MYST histone acetyltransferase 1.
To be Published
1Z7S
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The crystal structure of coxsackievirus A21
分子名称: CALCIUM ION, GUANOSINE-5'-MONOPHOSPHATE, Human COXSACKIEVIRUS A21, ...
著者Xiao, C, Bator-Kelly, C.M, Rieder, E, Chipman, P.R, Craig, A, Kuhn, R.J, Wimmer, E, Rossmann, M.G.
登録日2005-03-28
公開日2005-08-02
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure, 13, 2005
1ZCI
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HIV-1 DIS RNA subtype F- monoclinic form
分子名称: 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', POTASSIUM ION
著者Ennifar, E, Dumas, P.
登録日2005-04-12
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1ZL3
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Coupling of active site motions and RNA binding
分子名称: 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3', SULFATE ION, tRNA pseudouridine synthase B
著者Hoang, C, Hamilton, C.S, Mueller, E.G, Ferre-D'Amare, A.R.
登録日2005-05-05
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Precursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain
Protein Sci., 14, 2005
2DY8
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Solution structure of the second chromodomain of yeast Chd1
分子名称: Chromo domain protein 1
著者Okuda, M, Nishimura, Y.
登録日2006-09-07
公開日2006-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural Polymorphism of Chromodomains in Chd1
J.Mol.Biol., 365, 2007

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