PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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7GTQ	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with FMOPL000311a 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1, ~{N}-(2-ethyl-1,2,3,4-tetrazol-5-yl)butanamide 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
2OFO	MSrecA-native 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2007-01-04 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
7GSN	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000519b 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-[(thiophen-2-yl)methyl]benzoic acid, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
7FFE	Cryo-EM structure of VEEV VLP 分子名称: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2, ... 著者 Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C. 登録日 2021-07-23 公開日 2021-10-20 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3. Nature, 598, 2021
3IUH	Co2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: COBALT (II) ION, L-rhamnose isomerase 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-31 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
2OEP	MSrecA-ADP-complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-31 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
7GT2	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000752b 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1, [(4-chlorophenyl)sulfanyl]acetic acid 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
7F3F	CryoEM structure of human Kv4.2-KChIP1 complex 分子名称: Isoform 2 of Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2 著者 Kise, Y, Nureki, O. 登録日 2021-06-16 公開日 2021-10-13 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of gating modulation of Kv4 channel complexes. Nature, 599, 2021
7GU7	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster15 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
3BGF	X-ray crystal structure of the SARS coronavirus spike receptor binding domain in complex with F26G19 Fab 分子名称: F26G19 Fab, Spike protein S1 著者 Pak, J.E, Rini, J.M. 登録日 2007-11-26 公開日 2008-12-02 最終更新日 2021-03-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural insights into immune recognition of the severe acute respiratory syndrome coronavirus S protein receptor binding domain. J.Mol.Biol., 388, 2009
7GTB	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with FMSOA000899b 分子名称: 1H-indole-5-carboxylic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
7GU9	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster17 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7GTJ	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000280c 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1, [2-(morpholin-4-yl)phenyl]methanol 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
3IVT	Homocitrate Synthase Lys4 bound to 2-OG 分子名称: 2-OXOGLUTARIC ACID, Homocitrate synthase, mitochondrial, ... 著者 Bulfer, S.L, Scott, E.M, Couture, J.-F, Pillus, L, Trievel, R.C. 登録日 2009-09-01 公開日 2009-09-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Crystal structure and functional analysis of homocitrate synthase, an essential enzyme in lysine biosynthesis. J.Biol.Chem., 284, 2009
7GTX	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster2 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7F2E	SARS-CoV-2 nucleocapsid protein C-terminal domain (dodecamer) 分子名称: Nucleoprotein, PHOSPHATE ION 著者 Liu, C, Jiang, H. 登録日 2021-06-10 公開日 2021-10-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies. Febs J., 289, 2022
3BH7	Crystal structure of the RP2-Arl3 complex bound to GDP-AlF4 分子名称: ADP-ribosylation factor-like protein 3, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Veltel, S, Gasper, R, Wittinghofer, A. 登録日 2007-11-28 公開日 2008-03-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The retinitis pigmentosa 2 gene product is a GTPase-activating protein for Arf-like 3 Nat.Struct.Mol.Biol., 15, 2008
7GTV	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000765c 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 9~{H}-xanthene-9-carboxylic acid, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
7FFL	Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 2-fold axes 分子名称: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ... 著者 Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C. 登録日 2021-07-23 公開日 2021-10-20 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3. Nature, 598, 2021
7MTX	Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P176 分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-ribopyranosylamine, ... 著者 Kim, Y, Maltseva, N, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-05-13 公開日 2021-06-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P176 To Be Published
7FFF	Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3 分子名称: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ... 著者 Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C. 登録日 2021-07-23 公開日 2021-10-20 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3. Nature, 598, 2021
7MTU	Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P221 分子名称: 1,2-ETHANEDIOL, GLYCEROL, INOSINIC ACID, ... 著者 Kim, Y, Maltseva, N, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-05-13 公開日 2021-06-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P221 To Be Published
7EP9	The structure of carboxypeptidase from Fusobacterium nucleatum 分子名称: S9 family peptidase 著者 Wang, X, Jiang, Y.L. 登録日 2021-04-26 公開日 2021-10-27 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.604 Å) 主引用文献 Structural and biochemical analyses of the tetrameric carboxypeptidase S9Cfn from Fusobacterium nucleatum. Acta Crystallogr D Struct Biol, 77, 2021
3IZH	Mm-cpn D386A with ATP 分子名称: Chaperonin 著者 Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J. 登録日 2010-10-29 公開日 2011-02-02 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (11 Å) 主引用文献 Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber. Cell(Cambridge,Mass.), 144, 2011
2OGZ	Crystal structure of DPP-IV complexed with Lilly aryl ketone inhibitor 分子名称: 4-[(3R)-3-{[2-(4-FLUOROPHENYL)-2-OXOETHYL]AMINO}BUTYL]BENZAMIDE, Dipeptidyl peptidase 著者 Timm, D.E. 登録日 2007-01-09 公開日 2007-03-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Discovery of non-covalent dipeptidyl peptidase IV inhibitors which induce a conformational change in the active site. Bioorg.Med.Chem.Lett., 17, 2007

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