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5MWI
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BU of 5mwi by Molmil
Crystal structure of G(CUG)8G duplex
分子名称: RNA G(CUG)8C duplex, SULFATE ION
著者Kiliszek, A, Blaszczyk, L, Rypniewski, W.
登録日2017-01-18
公開日2017-03-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Stabilization of RNA hairpins using non-nucleotide linkers and circularization.
Nucleic Acids Res., 45, 2017
5MWN
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BU of 5mwn by Molmil
Structure of the EAEC T6SS component TssK N-terminal domain in complex with llama nanobodies nbK18 and nbK27
分子名称: PHOSPHATE ION, Type VI secretion protein, llama nanobody raised against TssK, ...
著者Cambillau, C, Nguyen, V.S, Spinelli, S, Legrand, P.
登録日2017-01-18
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex.
Nat Microbiol, 2, 2017
5MXG
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BU of 5mxg by Molmil
Photorhabdus asymbiotica lectin (PHL) in complex with blood group H trisaccharide
分子名称: Photorhabdus asymbiotica lectin PHL, SODIUM ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Jancarikova, G, Houser, J, Demo, G, Wimmerova, M.
登録日2017-01-23
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity.
PLoS Pathog., 13, 2017
7MPE
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BU of 7mpe by Molmil
Cryo-EM structure of the yeast cadmium factor 1 protein (Ycf1p)
分子名称: Metal resistance protein YCF1
著者Bickers, S.C, Benlekbir, S, Rubinstein, J.L, Kanelis, V.
登録日2021-05-04
公開日2021-06-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of Ycf1p reveals the transmembrane domain TMD0 and the regulatory region of ABCC transporters.
Proc.Natl.Acad.Sci.USA, 118, 2021
2GPW
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BU of 2gpw by Molmil
Crystal Structure of the Biotin Carboxylase Subunit, F363A Mutant, of Acetyl-CoA Carboxylase from Escherichia coli.
分子名称: Biotin carboxylase
著者Shen, Y, Chou, C.Y, Chang, G.G, Tong, L.
登録日2006-04-18
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Is dimerization required for the catalytic activity of bacterial biotin carboxylase?
Mol.Cell, 22, 2006
2GLJ
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BU of 2glj by Molmil
crystal structure of aminopeptidase I from Clostridium acetobutylicum
分子名称: MANGANESE (II) ION, Probable M18-family aminopeptidase 1
著者Min, T, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-04-04
公開日2006-06-13
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献crystal structure of aminopeptidase I from Clostridium acetobutylicum
To be Published
7MT0
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BU of 7mt0 by Molmil
Structure of the adeno-associated virus 9 capsid at pH 7.4
分子名称: Capsid protein VP1
著者Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
登録日2021-05-12
公開日2021-06-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
2GQX
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BU of 2gqx by Molmil
Crystal structure of cytochrome p450cam mutant (f87w/y96f/l244a/v247l/c334a) with pentachlorobenzene
分子名称: 1,2,3,4,5-PENTACHLOROBENZENE, Cytochrome P450-cam, POTASSIUM ION, ...
著者Rao, Z, Wong, L.L, Xu, F, Bell, S.G.
登録日2006-04-22
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-activity correlations in pentachlorobenzene oxidation by engineered cytochrome P450cam
Protein Eng.Des.Sel., 20, 2007
2Z2T
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BU of 2z2t by Molmil
Crystal structure of the complex between gp41 fragment N36 and fusion inhibitor SC34EK
分子名称: ACETIC ACID, Fusion inhibitor peptide SC34EK, SULFATE ION, ...
著者Nakamura, S, Ohkubo, T, Kobayashi, Y.
登録日2007-05-28
公開日2008-06-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intrahelical Salt-bridges in a-Helical Peptide Enhances its Binding to the Target: A New Design for HIV-1 Fusion Inhibitors
To be Published
2PVF
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BU of 2pvf by Molmil
Crystal Structure of Tyrosine Phosphorylated Activated FGF Receptor 2 (FGFR2) Kinase Domain in Complex with ATP Analog and Substrate Peptide
分子名称: Fibroblast growth factor receptor 2, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Chen, H, Mohammadi, M.
登録日2007-05-09
公開日2007-09-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A molecular brake in the kinase hinge region regulates the activity of receptor tyrosine kinases.
Mol.Cell, 27, 2007
5MTU
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BU of 5mtu by Molmil
Maltodextrin binding protein MalE1 from L. casei BL23 bound to alpha-cyclodextrin
分子名称: Cyclohexakis-(1-4)-(alpha-D-glucopyranose), MalE1
著者Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
登録日2017-01-10
公開日2017-07-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.999 Å)
主引用文献Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017
2PVS
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BU of 2pvs by Molmil
Structure of human pancreatic lipase related protein 2 mutant N336Q
分子名称: CALCIUM ION, Pancreatic lipase-related protein 2, SULFATE ION
著者Spinelli, S, Eydoux, C, Carriere, F, Cambillau, C.
登録日2007-05-10
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of human pancreatic lipase-related protein 2 with the lid in an open conformation.
Biochemistry, 47, 2008
7MOA
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BU of 7moa by Molmil
Cryo-EM structure of the c-MET II/HGF I complex bound with HGF II in a rigid conformation
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Hepatocyte growth factor, Hepatocyte growth factor receptor
著者Uchikawa, E, Chen, Z.M, Xiao, G.Y, Zhang, X.W, Bai, X.C.
登録日2021-05-01
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis of the activation of c-MET receptor.
Nat Commun, 12, 2021
7M31
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BU of 7m31 by Molmil
Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Thymine and NADPH Anaerobically
分子名称: Dihydropyrimidine dehydrogenase [NADP(+)], FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Butrin, A, Beaupre, B, Forouzesh, D, Liu, D, Moran, G.
登録日2021-03-18
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Perturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase.
Biochemistry, 60, 2021
7GHX
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BU of 7ghx by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with EDG-MED-0e5afe9d-1 (Mpro-P0030)
分子名称: (4R)-6-chloro-N-(1-methyl-2-oxo-2,3-dihydro-1H-imidazo[4,5-c]pyridin-7-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamide, 3C-like proteinase, CHLORIDE ION, ...
著者Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
登録日2023-08-11
公開日2023-11-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7MTZ
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BU of 7mtz by Molmil
Structure of the adeno-associated virus 9 capsid at pH pH 7.4 in complex with terminal galactose
分子名称: Capsid protein VP1, beta-D-galactopyranose
著者Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
登録日2021-05-14
公開日2021-06-09
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
2Z2B
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BU of 2z2b by Molmil
Deletion 107-116 mutant of dihydroorotase from E. coli
分子名称: Dihydroorotase, ZINC ION
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
5MV3
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BU of 5mv3 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
分子名称: heavy chain of ACC1 Fab fragment, light chain of ACC1 Fab fragment, synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II,
著者Dobritzsch, D, Holmdahl, R, Ge, C.
登録日2017-01-15
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
7MOB
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BU of 7mob by Molmil
Cryo-EM structure of 2:2 c-MET/NK1 complex
分子名称: Hepatocyte growth factor, Hepatocyte growth factor receptor
著者Uchikawa, E, Chen, Z.M, Xiao, G.Y, Zhang, X.W, Bai, X.C.
登録日2021-05-01
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural basis of the activation of c-MET receptor.
Nat Commun, 12, 2021
5MYA
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BU of 5mya by Molmil
Homodimerization of Tie2 Fibronectin-like domains 1-3 in space group C2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiopoietin-1 receptor, ...
著者Leppanen, V.-M, Saharinen, P, Alitalo, K.
登録日2017-01-26
公開日2017-04-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of Tie2 activation and Tie2/Tie1 heterodimerization.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2Z3W
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BU of 2z3w by Molmil
Prolyl tripeptidyl aminopeptidase mutant E636A
分子名称: Dipeptidyl aminopeptidase IV, GLYCEROL, SULFATE ION
著者Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T.
登録日2007-06-07
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism
J.Mol.Biol., 375, 2008
5MYK
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BU of 5myk by Molmil
Structure of Pyroglutamate-Abeta-specific Fab c#17 in complex with murine Abeta-pE3-18PEGb
分子名称: Amyloid beta A4 protein, Fab c#17 heavy chain, Fab c#17 light chain
著者Parthier, C, Piechotta, A, Stubbs, M.T.
登録日2017-01-26
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and functional analyses of pyroglutamate-amyloid-beta-specific antibodies as a basis for Alzheimer immunotherapy.
J. Biol. Chem., 292, 2017
7MO7
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BU of 7mo7 by Molmil
Cryo-EM structure of 2:2 c-MET/HGF holo-complex
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Hepatocyte growth factor, Hepatocyte growth factor receptor
著者Uchikawa, E, Chen, Z.M, Xiao, G.Y, Zhang, X.W, Bai, X.C.
登録日2021-05-01
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural basis of the activation of c-MET receptor.
Nat Commun, 12, 2021
2Z4I
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BU of 2z4i by Molmil
Crystal structure of the Cpx pathway activator NlpE from Escherichia coli
分子名称: Copper homeostasis protein cutF, HEXAETHYLENE GLYCOL, SULFATE ION
著者Hirano, Y, Hossain, M.M, Takeda, K, Tokuda, H, Miki, K.
登録日2007-06-18
公開日2007-09-04
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Studies of the Cpx Pathway Activator NlpE on the Outer Membrane of Escherichia coli
Structure, 15, 2007
7M32
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Dihydropyrimidine Dehydrogenase (DPD) C671A Mutant Soaked with Uracil and NADPH Anaerobically
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ALANINE, Dihydropyrimidine dehydrogenase [NADP(+)], ...
著者Butrin, A, Beaupre, B, Forouzesh, D, Liu, D, Moran, G.
登録日2021-03-18
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Perturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase.
Biochemistry, 60, 2021

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