PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

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7D0V	Crystal structure of Taiwan cobra 5'-nucleotidase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Snake venom 5'-nucleotidase, ... 著者 Tsai, M.-H, Lin, I.-J, Lin, C.-C, Wu, W.-G. 登録日 2020-09-12 公開日 2021-09-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.175 Å) 主引用文献 Crystal structure of Taiwan cobra 5'-nucleotidase To Be Published
8GJ4	A1 Tei: Adenylation domain 1 core construct from teicoplanin biosynthesis 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MbtH-like short polypeptide, ... 著者 Hansen, M.H, Cryle, M.J. 登録日 2023-03-14 公開日 2023-12-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Resurrecting ancestral antibiotics: unveiling the origins of modern lipid II targeting glycopeptides. Nat Commun, 14, 2023
7DDS	Ancestral myoglobin aMbSp of Puijila Darwini relative 分子名称: Ancestral myoglobin aMbSp, PROTOPORPHYRIN IX CONTAINING FE 著者 Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T. 登録日 2020-10-29 公開日 2021-09-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals. Iscience, 24, 2021
8HU7	Crystal structure of FGF2-M1 mutant - D28E/C78L/C96I/S137P 分子名称: Fibroblast growth factor 2 著者 Jung, Y.E, Cha, S.S, An, Y.J. 登録日 2022-12-22 公開日 2024-06-26 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural and biochemical investigation into stable FGF2 mutants with novel mutation sites and hydrophobic replacements for surface-exposed cysteines. Plos One, 19, 2024
8GIV	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: bipyridyl-conjugated helical peptide 著者 Hess, S.S, Nguyen, A.I. 登録日 2023-03-14 公開日 2023-11-15 最終更新日 2024-09-25 実験手法 X-RAY DIFFRACTION (0.99 Å) 主引用文献 Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc., 145, 2023
7DDU	Elephant seal myoglobin esMb 分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T. 登録日 2020-10-29 公開日 2021-09-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals. Iscience, 24, 2021
8GKM	A1 Leu graft + Leu: Adenylation domain 1 core construct from teicoplanin biosynthesis, leucine selection pocket graft; leucine bound 分子名称: ACETIC ACID, DI(HYDROXYETHYL)ETHER, LEUCINE, ... 著者 Hansen, M.H, Cryle, M.J. 登録日 2023-03-20 公開日 2023-12-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Resurrecting ancestral antibiotics: unveiling the origins of modern lipid II targeting glycopeptides. Nat Commun, 14, 2023
8GLC	A1 AncAla: Adenylation domain 1 core construct from ancestral reconstruction of glycopeptide antibiotic biosynthesis, alanine selection pocket 分子名称: MbtH-like short polypeptide, Non-ribosomal peptide synthetase 著者 Hansen, M.H, Cryle, M.J. 登録日 2023-03-21 公開日 2023-12-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.12 Å) 主引用文献 Resurrecting ancestral antibiotics: unveiling the origins of modern lipid II targeting glycopeptides. Nat Commun, 14, 2023
8HUE	Crystal structure of FGF2-M2 mutant - D28E/C78I/C96I/S137P 分子名称: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, Fibroblast growth factor 2 著者 Jung, Y.E, Cha, S.S, An, Y.J. 登録日 2022-12-23 公開日 2024-06-26 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structural and biochemical investigation into stable FGF2 mutants with novel mutation sites and hydrophobic replacements for surface-exposed cysteines. Plos One, 19, 2024
8GIC	A1 Tei + Hpg: Adenylation domain 1 core construct from teicoplanin biosynthesis; 4-hydroxyphenylglycine bound 分子名称: (2S)-AMINO(4-HYDROXYPHENYL)ACETIC ACID, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MbtH-like short polypeptide, ... 著者 Hansen, M.H, Cryle, M.J. 登録日 2023-03-14 公開日 2023-12-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Resurrecting ancestral antibiotics: unveiling the origins of modern lipid II targeting glycopeptides. Nat Commun, 14, 2023
8GM7	Structure of apurinic/apyrimidinic DNA Lyase TK0353 from Thermococcus kodakarensis (Native Crystal Form) 分子名称: GLYCEROL, SULFATE ION, TK0353 著者 Eckenroth, B.E, Gardner, A.F, Doublie, S. 登録日 2023-03-24 公開日 2023-12-06 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Thermococcus kodakarensis TK0353 is a novel AP lyase with a new fold. J.Biol.Chem., 300, 2023
7DEV	Crystal Structures of Anthocyanin 5,3'-aromatic acyltransferase from Gentiana triflora 分子名称: Anthocyanin 5-aromatic acyltransferase 著者 Murayama, K, Kato-Murayama, M, Shirouzu, M. 登録日 2020-11-05 公開日 2021-09-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Anthocyanin 5,3'-aromatic acyltransferase from Gentiana triflora, a structural insight into biosynthesis of a blue anthocyanin. Phytochemistry, 186, 2021
7DEX	Crystal Structures of Anthocyanin 5,3'-aromatic acyltransferase H174A mutant with caffeoyl-CoA 分子名称: Anthocyanin 5-aromatic acyltransferase, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (E)-3-[3,4-bis(oxidanyl)phenyl]prop-2-enethioate 著者 Murayama, K, Kato-Murayama, M, Shirouzu, M. 登録日 2020-11-05 公開日 2021-09-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Anthocyanin 5,3'-aromatic acyltransferase from Gentiana triflora, a structural insight into biosynthesis of a blue anthocyanin. Phytochemistry, 186, 2021
8IGD	The crystal structure of the minimal interaction domains of DRB7.2:DRB4 complex 分子名称: Double-stranded RNA-binding domain (DsRBD)-containing protein, Double-stranded RNA-binding protein 4 著者 Paturi, S, Deshmukh, M.V. 登録日 2023-02-20 公開日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The mechanism of the DRB7.2:DRB4 mediated endogenous inverted-repeat dsRNA (endo-IR dsRNA) sequestering in plants To Be Published
8FX6	Non-ribosomal PCP-C didomain (amide stabilised leucine) acceptor bound state 分子名称: N-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]-L-leucinamide, PCP-C didomain 著者 Ho, Y.T.C, Cryle, M.J. 登録日 2023-01-24 公開日 2023-06-21 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis. Chem.Commun.(Camb.), 59, 2023
8I0H	Closed conformation of CTPS with dATP dUTP dGTP and DON 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CTP synthase, ... 著者 Liu, J.L, Guo, C.J. 登録日 2023-01-11 公開日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of bifunctional CTP/dCTP synthase To Be Published
8FRJ	Structure of nsp14 N7-MethylTransferase domain fused with TELSAM bound to SGC0946 分子名称: 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Transcription factor ETV6,Guanine-N7 methyltransferase nsp14 chimera, ZINC ION 著者 Kottur, J, Aggarwal, A.K. 登録日 2023-01-07 公開日 2023-07-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structures of SARS-CoV-2 N7-methyltransferase with DOT1L and PRMT7 inhibitors provide a platform for new antivirals. Plos Pathog., 19, 2023
7DPT	Structural basis for ligand binding modes of CTP synthase 分子名称: 6-DIAZENYL-5-OXO-L-NORLEUCINE, ADENOSINE-5'-DIPHOSPHATE, CTP synthase, ... 著者 Liu, J.L, Zhou, X, Guo, C.J, Chang, C.C. 登録日 2020-12-21 公開日 2021-09-15 実験手法 ELECTRON MICROSCOPY (2.48 Å) 主引用文献 Structural basis for ligand binding modes of CTP synthase. Proc.Natl.Acad.Sci.USA, 118, 2021
7DPW	Structural basis for ligand binding modes of CTP synthase 分子名称: CTP synthase, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION 著者 Liu, J.L, Zhou, X, Guo, C.J, Chang, C.C. 登録日 2020-12-21 公開日 2021-09-15 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.65 Å) 主引用文献 Structural basis for ligand binding modes of CTP synthase. Proc.Natl.Acad.Sci.USA, 118, 2021
8I0I	dmCTPS with dATP dUTP dGTP and DON 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CTP synthase, DEOXYURIDINE-5'-TRIPHOSPHATE, ... 著者 Guo, C.J, Liu, J.L. 登録日 2023-01-11 公開日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of bifunctional CTP/dCTP synthase Biorxiv, 2023
8FZU	The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone, Thr-Val linker variant, Expressed with SUMO tag 分子名称: POTASSIUM ION, SULFATE ION, Transcription factor ETV6,Anthrax toxin receptor 2 著者 Gajjar, P.L, Litchfield, C.M, Callahan, M, Redd, N, Doukov, T, Lebedev, A, Moody, J.D. 登録日 2023-01-30 公開日 2023-07-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Increasing the bulk of the 1TEL-target linker and retaining the 10×His tag in a 1TEL-CMG2-vWa construct improves crystal order and diffraction limits. Acta Crystallogr D Struct Biol, 79, 2023
8HZY	The crystal structure of a Radical SAM Enzyme DesII 分子名称: DesII, IRON/SULFUR CLUSTER, METHIONINE 著者 Hou, X.L, Zhou, J.H. 登録日 2023-01-10 公開日 2024-07-10 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.039788 Å) 主引用文献 Mechanistic Insights from the Crystal Structure and Computational Analysis of the Radical SAM Deaminase DesII. Adv Sci, 11, 2024
8HYR	Crystal structure of human KARS apo 分子名称: Lysine--tRNA ligase 著者 Zhang, X, Wang, Y. 登録日 2023-01-07 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure of human KARS apo To Be Published
8I37	Helicobacter pylori G6PDH 分子名称: Glucose-6-phosphate 1-dehydrogenase 著者 Zhou, N, Gao, L.Z. 登録日 2023-01-16 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Inorganic polysulfide kills Helicobacter pylori by inactivating G6PDH via cysteine polysulfidation To Be Published
8FW4	Crystal structure of the adenosylcobalamin riboswitch holo conformation in absence of ligand 分子名称: MAGNESIUM ION, RNA (210-MER) 著者 Stagno, J.R, Wang, Y.-X. 登録日 2023-01-20 公開日 2023-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 Crystal structure of cobalamin ribositch in holo conformation without ligand Nucleic Acids Res., 2023

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