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2JRM
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Solution NMR structure of ribosome modulation factor VP1593 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR55
分子名称: Ribosome modulation factor
著者Tang, Y, Rossi, P, Swapna, G, Wang, H, Jiang, M, Cunningham, K, Owens, L, Ma, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2007-06-27
公開日2007-07-17
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of Ribosome Modulation Factor VP1593 from Vibrio parahaemolyticus.
To be Published
7B6A
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BU of 7b6a by Molmil
BK Polyomavirus VP1 pentamer core (residues 30-299)
分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, IODIDE ION, ...
著者Osipov, E.M, Munawar, A, Beelen, S, Strelkov, S.V.
登録日2020-12-07
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Discovery of novel druggable pockets on polyomavirus VP1 through crystallographic fragment-based screening to develop capsid assembly inhibitors.
Rsc Chem Biol, 3, 2022
5LUN
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BU of 5lun by Molmil
Ethylene Forming Enzyme from Pseudomonas syringae pv. phaseolicola - P1 ultra-high resolution crystal form in complex with iron, N-oxalylglycine and arginine
分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, FE (III) ION, ...
著者McDonough, M.A, Zhang, Z, Schofield, C.J.
登録日2016-09-09
公開日2017-04-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Structural and stereoelectronic insights into oxygenase-catalyzed formation of ethylene from 2-oxoglutarate.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2ZO5
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BU of 2zo5 by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, ...
著者Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
登録日2008-05-05
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens
J.Mol.Biol., 389, 2009
2JJP
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BU of 2jjp by Molmil
Structure of cytochrome P450 EryK in complex with inhibitor ketoconazole (KC)
分子名称: 1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE, CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
登録日2008-04-15
公開日2009-07-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
3HPG
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BU of 3hpg by Molmil
Visna virus integrase (residues 1-219) in complex with LEDGF IBD: examples of open integrase dimer-dimer interfaces
分子名称: Integrase, PC4 and SFRS1-interacting protein, ZINC ION
著者Hare, S, Labeja, A, Cherepanov, P.
登録日2009-06-04
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Structural basis for functional tetramerization of lentiviral integrase
Plos Pathog., 5, 2009
7LY6
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BU of 7ly6 by Molmil
Structure of a trans-acting NRPS oxidase, BmdC, involved in bacillamide biosynthesis
分子名称: BmdC, NRPS oxidase, FLAVIN MONONUCLEOTIDE, ...
著者Fortinez, C.M, Bloudoff, K, Schmeing, T.M.
登録日2021-03-05
公開日2022-02-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Structures and function of a tailoring oxidase in complex with a nonribosomal peptide synthetase module.
Nat Commun, 13, 2022
7DWB
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BU of 7dwb by Molmil
Human Pannexin1 model
分子名称: Pannexin-1
著者Zhang, S.S, Yang, M.J.
登録日2021-01-17
公開日2021-05-26
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structure of the full-length human Pannexin1 channel and insights into its role in pyroptosis.
Cell Discov, 7, 2021
5LWS
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BU of 5lws by Molmil
Endothiapepsin in complex with fragment 177 and a derivative thereof
分子名称: 4-[12-[(1-chloranyl-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazin-3-ium-3-yl)methyl]-10,11-dimethyl-3,4,6,7,11-pentazatricyclo[7.3.0.0^{2,6}]dodeca-1(12),2,4,7,9-pentaen-5-yl]-1,2,5-trimethyl-pyrrole-3-carbaldehyde, 4-chloranyl-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazine, ACETATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-09-19
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献A False-Positive Screening Hit in Fragment-Based Lead Discovery: Watch out for the Red Herring.
Angew. Chem. Int. Ed. Engl., 56, 2017
7LEI
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BU of 7lei by Molmil
HIV-1 Protease WT (NL4-3) in Complex with PU10 (LR4-07)
分子名称: Protease, SULFATE ION, diethyl [(4-{(2S,3R)-4-{[(1,3-benzothiazol-6-yl)sulfonyl](2-ethylbutyl)amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate
著者Lockbaum, G.J, Rusere, L.N, Henes, M, Kosovrasti, K, Lee, S.K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A.
登録日2021-01-14
公開日2022-01-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.943 Å)
主引用文献HIV-1 Protease Inhibitors with a P1 Phosphonate Modification Maintain Potency against Drug Resistant Variants by Increased van der Waals Contacts with Flaps Residues
To Be Published
3HRD
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BU of 3hrd by Molmil
Crystal structure of nicotinate dehydrogenase
分子名称: CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Wagener, N, Pierik, A.J, Hille, R, Dobbek, H.
登録日2009-06-09
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Mo-Se active site of nicotinate dehydrogenase
Proc.Natl.Acad.Sci.USA, 106, 2009
3HXE
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BU of 3hxe by Molmil
Engineered RabGGTase in complex with a peptidomimetic inhibitor (compound 37)
分子名称: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ...
著者Guo, Z, Alexandrov, K, Waldmann, H, Goody, R.S, Blankenfeldt, W.
登録日2009-06-20
公開日2009-09-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Design, synthesis, and characterization of Peptide-based rab geranylgeranyl transferase inhibitors
J.Med.Chem., 52, 2009
7B1D
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BU of 7b1d by Molmil
Cryo-EM of Aedes Aegypti Toll5A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor
著者Gangloff, M, Hardwick, S.W, Chirgadze, D.Y.
登録日2020-11-24
公開日2022-07-13
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structure and dynamics of Toll immunoreceptor activation in the mosquito Aedes aegypti.
Nat Commun, 13, 2022
8QN0
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BU of 8qn0 by Molmil
Soluble epoxide hydrolase in complex with RK3
分子名称: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-5-(4-methylphenyl)sulfonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-2-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
著者Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-09-25
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
2JCD
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BU of 2jcd by Molmil
Structure of the N-oxygenase AurF from Streptomyces thioluteus
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, N-OXIDASE
著者Zocher, G.E, Winkler, R, Hertweck, C, Schulz, G.E.
登録日2006-12-21
公開日2007-09-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structure and Action of the N-Oxygenase Aurf from Streptomyces Thioluteus.
J.Mol.Biol., 373, 2007
7TW1
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BU of 7tw1 by Molmil
Cryo-EM structure of human band 3-protein 4.2 complex (B2P2vertical)
分子名称: Band 3 anion transport protein, Protein 4.2
著者Xia, X, Liu, S.H, Zhou, Z.H.
登録日2022-02-06
公開日2022-06-08
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structure, dynamics and assembly of the ankyrin complex on human red blood cell membrane.
Nat.Struct.Mol.Biol., 29, 2022
8QMZ
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BU of 8qmz by Molmil
Soluble epoxide hydrolase in complex with RK4
分子名称: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-2-(4-methylphenyl)sulfonyl-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-5-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
著者Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-09-25
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
5LXY
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BU of 5lxy by Molmil
Structure of the minimal RBM7 - ZCCHC8 Complex
分子名称: BROMIDE ION, RNA-binding protein 7, Zinc finger CCHC domain-containing protein 8
著者Falk, S, Finogenova, K, Benda, C, Conti, E.
登録日2016-09-23
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.
Nat Commun, 7, 2016
2ZRT
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BU of 2zrt by Molmil
Crystal structure of Zn2+-bound form of des3-23ALG-2
分子名称: Programmed cell death protein 6, ZINC ION
著者Suzuki, H, Kawasaki, M, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-09-01
公開日2008-11-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
7P3L
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BU of 7p3l by Molmil
Isopenicillin N synthase in complex with Fe and the substrate analogue AadCyshomoCys
分子名称: 2-AMINOHEXANEDIOIC ACID, CYSTEINE, D-homocysteine, ...
著者Rabe, P, Clifton, I, Schofield, C.J.
登録日2021-07-08
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Isopenicillin N synthase in complex with Fe and the substrate analogue AadCyshomoCys
To Be Published
8RDX
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BU of 8rdx by Molmil
PGGtase I in complex with probe BAY-6092
分子名称: (5~{R})-5-(2-methoxyphenyl)-9-[(2~{R})-3,3,3-tris(fluoranyl)-2-methoxy-2-phenyl-propanoyl]-3,9-diazaspiro[5.5]undecan-2-one, CHLORIDE ION, DIPHOSPHATE, ...
著者Steuber, H.
登録日2023-12-08
公開日2024-02-14
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (3.67 Å)
主引用文献Discovery of YAP1/TAZ pathway inhibitors through phenotypic screening with potent anti-tumor activity via blockade of Rho-GTPase signaling.
Cell Chem Biol, 31, 2024
7P42
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BU of 7p42 by Molmil
Crystal structure of IpgC in complex with a follow-up compound based on J2
分子名称: 2-(4,6-dimethylpyrimidin-2-yl)-3H-isoindol-1-imine, CHLORIDE ION, Chaperone protein IpgC, ...
著者Gardonyi, M, Heine, A, Klebe, G.
登録日2021-07-09
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of IpgC in complex with a follow-up compound based on J2
To be published
7TNT
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BU of 7tnt by Molmil
The tubulin-based conoid from detergent-extract Toxoplasma gondii cells
分子名称: Tubulin alpha chain, Tubulin beta chain
著者Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
登録日2022-01-21
公開日2022-06-22
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
2O8Y
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BU of 2o8y by Molmil
Apo IRAK4 Kinase Domain
分子名称: Interleukin-1 receptor-associated kinase 4
著者Boriack-Sjodin, P.A, Mol, C.
登録日2006-12-12
公開日2007-12-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of the apo and inhibited IRAK4 kinase domain
To be Published
8RQ4
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BU of 8rq4 by Molmil
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid
分子名称: 4-(dipropylsulfamoyl)benzoic acid, ATP-binding cassette sub-family C member 2, CHOLESTEROL HEMISUCCINATE
著者Mazza, T, Beis, K.
登録日2024-01-17
公開日2024-02-14
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis for the modulation of MRP2 activity by phosphorylation and drugs.
Nat Commun, 15, 2024

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