PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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5OD9	Structure of the engineered metalloesterase MID1sc9 分子名称: (2~{S})-2-phenylpropanoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ... 著者 Studer, S, Mittl, P.R.E, Hilvert, D. 登録日 2017-07-05 公開日 2018-12-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Evolution of a highly active and enantiospecific metalloenzyme from short peptides. Science, 362, 2018
5OP3	Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme 分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ... 著者 Fischer, G, Hogan, B.J, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M. 登録日 2017-08-09 公開日 2018-08-29 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.359 Å) 主引用文献 Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme To be published
7Y7P	QDE-1 in complex with RNA template, RNA primer and AMPNPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7Q	QDE-1 in complex with RNA template, RNA primer and 3'-dGTP 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7R	QDE-1 in complex with DNA template, RNA primer and 3'-dGTP 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*AP*AP*CP*TP*AP*CP*CP*GP*TP*CP*GP*GP*A)-3'), ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7S	QDE-1 in complex with DNA template, RNA primer and AMPNPP 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Y7T	QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*G*AP*GP*AP*CP*CP*TP*TP*TP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Cui, R.X, Gan, J.H, Ma, J.B. 登録日 2022-06-22 公開日 2022-09-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1. Nucleic Acids Res., 50, 2022
7Z7C	Broadly neutralizing DARPin bnD.8 in complex with the HIV-1 envelope variable loop 3 peptide V3 (BF520) 分子名称: 1,2-ETHANEDIOL, Broadly neutralizing DARPin bnD.8, Envelope glycoprotein gp160, ... 著者 Mittl, P.R, Gloegl, M. 登録日 2022-03-15 公開日 2023-03-29 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization. Nat.Struct.Mol.Biol., 30, 2023
7ZBS	Solution NMR structure of the HTH_8cm consensus miniprotein in 30% TFE at 278K 分子名称: HTH_8cm 著者 Socha, O, Jakubec, D. 登録日 2022-03-24 公開日 2022-04-06 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Consensus design of structured miniproteins using spectral analysis of domain residue interaction networks To Be Published
7XM1	Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions 分子名称: BARIUM ION, TIP60 K67E mutant 著者 Ohara, N, Kawakami, N, Arai, R, Adachi, N, Moriya, T, Kawasaki, M, Miyamoto, K. 登録日 2022-04-24 公開日 2023-01-04 最終更新日 2023-11-29 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions. J.Am.Chem.Soc., 145, 2023
7ZYU	HDAC6 ZnF domain inhibitor - DARPin (Designed Ankyrin repeat protein) F10 分子名称: 1,2-ETHANEDIOL, Designed Ankyrin repeat protein F10, Histone deacetylase 6, ... 著者 Wang, L, Kempf, G. 登録日 2022-05-25 公開日 2022-06-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Disrupting the HDAC6-ubiquitin interaction impairs infection by influenza and Zika virus and cellular stress pathways. Cell Rep, 39, 2022
2VUX	Human ribonucleotide reductase, subunit M2 B 分子名称: FE (III) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B 著者 Welin, M, Moche, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Svensson, L, Thorsell, A.G, Tresaugues, L, van Den Berg, S, Weigelt, J, Wikstrom, M, Nordlund, P, Structural Genomics Consortium (SGC) 登録日 2008-05-31 公開日 2008-07-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Human Ribonucleotide Reductase, Subunit M2 B To be Published
5KWD	Computationally Designed Symmetric Homotetramer 分子名称: Ankyrin repeat-containing protein 著者 Fallas, J.A, Sankaran, B, Zwart, P, Baker, D. 登録日 2016-07-17 公開日 2017-04-12 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Computational design of self-assembling cyclic protein homo-oligomers. Nat Chem, 9, 2017
2W6Z	Crystal structure of Biotin carboxylase from E. coli in complex with the 3-(3-Methyl-but-2-enyl)-3H-purin-6-ylamine fragment 分子名称: 3-(3-methylbut-2-en-1-yl)-3H-purin-6-amine, BIOTIN CARBOXYLASE, CHLORIDE ION 著者 Mochalkin, I, Miller, J.R. 登録日 2008-12-19 公開日 2009-05-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Discovery of Antibacterial Biotin Carboxylase Inhibitors by Virtual Screening and Fragment-Based Approaches. Acs Chem.Biol., 4, 2009
2W6O	Crystal structure of Biotin carboxylase from E. coli in complex with 4-Amino-7,7-dimethyl-7,8-dihydro-quinazolinone fragment 分子名称: 4-amino-7,7-dimethyl-7,8-dihydroquinazolin-5(6H)-one, BIOTIN CARBOXYLASE, CHLORIDE ION 著者 Mochalkin, I, Miller, J.R. 登録日 2008-12-18 公開日 2009-05-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Discovery of Antibacterial Biotin Carboxylase Inhibitors by Virtual Screening and Fragment-Based Approaches. Acs Chem.Biol., 4, 2009
2W9J	The crystal structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle 分子名称: SIGNAL RECOGNITION PARTICLE SUBUNIT SRP14 著者 Brooks, M.A, Ravelli, R.B.G, McCarthy, A.A, Strub, K, Cusack, S. 登録日 2009-01-25 公開日 2009-02-03 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of Srp14 from the Schizosaccharomyces Pombe Signal Recognition Particle. Acta Crystallogr.,Sect.D, 65, 2009
5L0P	Symmetry-based assembly of a two-dimensional protein lattice 分子名称: Transcription factor ETV6, Ferric uptake regulation protein chimera 著者 Faham, S. 登録日 2016-07-27 公開日 2017-03-29 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Symmetry based assembly of a 2 dimensional protein lattice. PLoS ONE, 12, 2017
5LE2	Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_15_D12_15_D12 分子名称: ACETATE ION, DDD_D12_15_D12_15_D12, THIOCYANATE ION 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LEC	Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_12_D12_12_D12 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DDD_D12_12_D12_12_D12 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.506 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LE9	Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_09_3G124 分子名称: ACETATE ION, DD_Off7_09_3G124 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LEE	Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_12_D12_12_D12 分子名称: DDD_D12_12_D12_12_D12 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.401 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LE8	Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_15_D12 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DD_D12_15_D12, GLYCEROL, ... 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LW2	Crystal structure of DARPin 5m3_D12 分子名称: ACETATE ION, DARPin_5m3_D12 著者 Batyuk, A, Wu, Y, Plueckthun, A. 登録日 2016-09-15 公開日 2017-09-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LE7	Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_13_D12 分子名称: DD_D12_13_D12, SULFATE ION 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.104 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017
5LE3	Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_09_D12 分子名称: DD_D12_09_D12 著者 Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A. 登録日 2016-06-29 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Rigidly connected multispecific artificial binders with adjustable geometries. Sci Rep, 7, 2017

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