PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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6JSU	Structure of Geobacillus kaustophilus lactonase, Y99C/D266N double mutant 分子名称: FE (III) ION, HYDROXIDE ION, Phosphotriesterase, ... 著者 Xue, B, Yew, W.S. 登録日 2019-04-08 公開日 2020-04-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Directed Computational Evolution of Quorum-Quenching Lactonases from the Amidohydrolase Superfamily. Structure, 28, 2020
8I2J	E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface 分子名称: 1-(4-methoxyphenyl)ethanone, SULFATE ION, TRYPTOPHANYL-5'AMP, ... 著者 Xiang, M, Zhou, H. 登録日 2023-01-14 公開日 2023-04-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I27	E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface 分子名称: 1,2-ETHANEDIOL, 4-methoxybenzenecarbonitrile, SULFATE ION, ... 著者 Xiang, M, Zhou, H. 登録日 2023-01-14 公開日 2023-04-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I2A	E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface 分子名称: 1,2-ETHANEDIOL, 5-METHOXYBENZIMIDAZOLE, SULFATE ION, ... 著者 Xiang, M, Zhou, H. 登録日 2023-01-14 公開日 2023-04-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I2C	E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface 分子名称: 1,2-ETHANEDIOL, 4-methoxyaniline, SULFATE ION, ... 著者 Xiang, M, Zhou, H. 登録日 2023-01-14 公開日 2023-04-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I2L	E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface 分子名称: 1,2-ETHANEDIOL, CHLORZOXAZONE, SULFATE ION, ... 著者 Xiang, M, Zhou, H. 登録日 2023-01-14 公開日 2023-04-12 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
7CKF	The N-terminus of interferon-inducible antiviral protein-dimer 分子名称: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, Guanylate-binding protein 5, ... 著者 Cui, W, Yang, H.T. 登録日 2020-07-16 公開日 2021-05-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.284 Å) 主引用文献 Structural basis for GTP-induced dimerization and antiviral function of guanylate-binding proteins. Proc.Natl.Acad.Sci.USA, 118, 2021
8DPX	Preligand association structure of DR5 分子名称: Tumor necrosis factor receptor superfamily member 10B 著者 Du, G, Zhao, L, Chou, J.J. 登録日 2022-07-17 公開日 2023-02-15 実験手法 SOLUTION NMR 主引用文献 Autoinhibitory structure of preligand association state implicates a new strategy to attain effective DR5 receptor activation. Cell Res., 33, 2023
6OTC	Synthetic Fab bound to Marburg virus VP35 interferon inhibitory domain 分子名称: CHLORIDE ION, GLYCEROL, Polymerase cofactor VP35, ... 著者 Amatya, P, Chen, G, Borek, D, Sidhu, S.S, Leung, D.W. 登録日 2019-05-02 公開日 2019-06-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Inhibition of Marburg Virus RNA Synthesis by a Synthetic Anti-VP35 Antibody. Acs Infect Dis., 5, 2019
1TN4	FOUR CALCIUM TNC 分子名称: CALCIUM ION, TROPONIN C 著者 Love, M.L, Dominguez, R, Houdusse, A, Cohen, C. 登録日 1997-09-18 公開日 1998-04-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structures of four Ca2+-bound troponin C at 2.0 A resolution: further insights into the Ca2+-switch in the calmodulin superfamily. Structure, 5, 1997
8F0U	Structure of a 12mer DegP cage bound to the client protein hTRF1 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-04 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F21	Structure of a 30mer DegP cage bound to the client protein hTRF1 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-06 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (14.1 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F0A	Client-bound structure of a DegP trimer within a 12mer cage 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-02 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F26	Structure of a 60mer DegP cage bound to the client protein hTRF1 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-07 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F1T	Structure of an 18mer DegP cage bound to the client protein hTRF1 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-06 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (12.1 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8F1U	Structure of a 24mer DegP cage bound to the client protein hTRF1 分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 著者 Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. 登録日 2022-11-06 公開日 2022-11-23 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (13.8 Å) 主引用文献 Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
1SZO	Crystal Structure Analysis of the 6-Oxo Camphor Hydrolase His122Ala Mutant Bound to Its Natural Product (2S,4S)-alpha-Campholinic Acid 分子名称: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3,3-TRIMETHYLCYCLOPENTANONE, 6-oxocamphor hydrolase, CALCIUM ION 著者 Leonard, P.M, Grogan, G. 登録日 2004-04-06 公開日 2004-06-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of 6-oxo camphor hydrolase H122A mutant bound to its natural product, (2S,4S)-alpha-campholinic acid: mutant structure suggests an atypical mode of transition state binding for a crotonase homolog. J.Biol.Chem., 279, 2004
6B72	A novel HIV-1 Nef dimer interface induced by a single octyl-glucoside molecule 分子名称: Protein Nef, octyl beta-D-glucopyranoside 著者 Wu, M, Augelli-Szafran, C.E, Ptak, R.G, Smithgall, T.E. 登録日 2017-10-03 公開日 2018-02-21 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 A single beta-octyl glucoside molecule induces HIV-1 Nef dimer formation in the absence of partner protein binding. PLoS ONE, 13, 2018
1MKT	CARBOXYLIC ESTER HYDROLASE, 1.72 ANGSTROM TRIGONAL FORM OF THE BOVINE RECOMBINANT PLA2 ENZYME 分子名称: CALCIUM ION, PHOSPHOLIPASE A2 著者 Sundaralingam, M. 登録日 1997-09-06 公開日 1998-03-11 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 1.72 A resolution refinement of the trigonal form of bovine pancreatic phospholipase A2. Acta Crystallogr.,Sect.D, 54, 1998
9BG1	Tri-complex of Compound-3, KRAS G12V, and CypA 分子名称: (2R)-N-[(1P,7S,9S,13R,20M)-21-ethyl-20-{2-[(1S)-1-methoxyethyl]pyridin-3-yl}-17,17-dimethyl-8,14-dioxo-15-oxa-4-thia-9,21,27,28-tetraazapentacyclo[17.5.2.1~2,5~.1~9,13~.0~22,26~]octacosa-1(24),2,5(28),19,22,25-hexaen-7-yl]-3-methyl-2-(N-methylacetamido)butanamide (non-preferred name), GTPase KRas, MAGNESIUM ION, ... 著者 Tomlinson, A.C.A, Saldajeno-Concar, M, Knox, J.E, Yano, J.K. 登録日 2024-04-18 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Tri-complex of Compound-3, KRAS G12V, and CypA To be published
9BFY	Tri-complex of Compound-12, KRAS G12C, and CypA 分子名称: (3R)-N-[(2S)-1-{[(1M,8R,10R,14S,21M)-22-ethyl-4-hydroxy-21-{2-[(1R)-1-methoxyethyl]pyridin-3-yl}-18,18-dimethyl-9,15-dioxo-16-oxa-10,22,28-triazapentacyclo[18.5.2.1~2,6~.1~10,14~.0~23,27~]nonacosa-1(25),2(29),3,5,20,23,26-heptaen-8-yl]amino}-3-methyl-1-oxobutan-2-yl]-N-methyl-1-propanoylpyrrolidine-3-carboxamide (non-preferred name), CHLORIDE ION, GTPase KRas, ... 著者 Tomlinson, A.C.A, Saldajeno-Concar, M, Knox, J.E, Yano, J.K. 登録日 2024-04-18 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Tri-complex of Compound-12, KRAS G12C, and CypA To be published
3QD6	Crystal structure of the CD40 and CD154 (CD40L) complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD40 ligand, Tumor necrosis factor receptor superfamily member 5 著者 Lee, J.-O, Kim, Y.J, Song, D.H, Kim, H.M, Park, B.S. 登録日 2011-01-18 公開日 2011-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystallographic and mutational analysis of the CD40-CD154 complex and its implications for receptor activation J.Biol.Chem., 286, 2011
1K47	Crystal Structure of the Streptococcus pneumoniae Phosphomevalonate Kinase (PMK) 分子名称: phosphomevalonate kinase 著者 Romanowski, M.J, Bonanno, J.B, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2001-10-05 公開日 2002-05-08 最終更新日 2021-02-03 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Crystal structure of the Streptococcus pneumoniae phosphomevalonate kinase, a member of the GHMP kinase superfamily. Proteins, 47, 2002
1CFB	CRYSTAL STRUCTURE OF TANDEM TYPE III FIBRONECTIN DOMAINS FROM DROSOPHILA NEUROGLIAN AT 2.0 ANGSTROMS 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DROSOPHILA NEUROGLIAN, ... 著者 Huber, A.H, Wang, Y.E, Bieber, A.J, Bjorkman, P.J. 登録日 1994-08-27 公開日 1994-11-30 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of tandem type III fibronectin domains from Drosophila neuroglian at 2.0 A. Neuron, 12, 1994
1T6C	Structural characterization of the Ppx/GppA protein family: crystal structure of the Aquifex aeolicus family member 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Kristensen, O, Laurberg, M, Liljas, A, Kastrup, J.S, Gajhede, M. 登録日 2004-05-06 公開日 2004-08-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family Biochemistry, 43, 2004

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