PDB: 341 件ウェブページステータス検索Chemie searchBIRD

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8GA8	Structure of the yeast (HDAC) Rpd3L complex 分子名称: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ... 著者 Patel, A.B, Radhakrishnan, I, He, Y. 登録日 2023-02-22 公開日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex. Nat Commun, 14, 2023
8HPO	Cryo-EM structure of a SIN3/HDAC complex from budding yeast 分子名称: Histone deacetylase RPD3, PHOSPHOTHREONINE, POTASSIUM ION, ... 著者 Guo, Z, Zhan, X, Wang, C. 登録日 2022-12-12 公開日 2023-05-03 最終更新日 2023-07-05 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structure of a SIN3-HDAC complex from budding yeast. Nat.Struct.Mol.Biol., 30, 2023
5IKK	Structure of the histone deacetylase Clr3 分子名称: 1,2-ETHANEDIOL, Histone deacetylase clr3, MAGNESIUM ION, ... 著者 Brugger, C, Schalch, T. 登録日 2016-03-03 公開日 2016-04-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 SHREC Silences Heterochromatin via Distinct Remodeling and Deacetylation Modules. Mol.Cell, 62, 2016
5EDU	Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin A 分子名称: Maltose-binding periplasmic protein, Histone deacetylase 6 chimera, POTASSIUM ION, ... 著者 Hai, Y, Christianson, D.W. 登録日 2015-10-22 公開日 2016-07-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Histone deacetylase 6 structure and molecular basis of catalysis and inhibition. Nat.Chem.Biol., 12, 2016
8C60	Cryo-EM structure of the human SIN3B full-length complex at 3.4 Angstrom resolution 分子名称: CALCIUM ION, Histone deacetylase 2, Isoform 2 of Paired amphipathic helix protein Sin3b, ... 著者 Alfieri, C, Wan, S.M, Muhammad, R. 登録日 2023-01-10 公開日 2023-05-10 最終更新日 2023-05-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Mechanism of assembly, activation and lysine selection by the SIN3B histone deacetylase complex. Nat Commun, 14, 2023
8I03	Cryo-EM structure of the SIN3L complex from S. pombe 分子名称: Chromatin modification-related protein png2, Histone deacetylase clr6, POTASSIUM ION, ... 著者 Wang, C, Guo, Z, Zhan, X. 登録日 2023-01-10 公開日 2023-05-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Two assembly modes for SIN3 histone deacetylase complexes. Cell Discov, 9, 2023
8I02	Cryo-EM structure of the SIN3S complex from S. pombe 分子名称: Chromatin modification-related protein eaf3, Cph1, Histone deacetylase clr6, ... 著者 Wang, C, Guo, Z, Zhan, X. 登録日 2023-01-10 公開日 2023-05-03 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Two assembly modes for SIN3 histone deacetylase complexes. Cell Discov, 9, 2023
4A69	Structure of HDAC3 bound to corepressor and inositol tetraphosphate 分子名称: ACETATE ION, D-MYO INOSITOL 1,4,5,6 TETRAKISPHOSPHATE, GLYCEROL, ... 著者 Watson, P.J, Fairall, L, Santos, G.M, Schwabe, J.W.R. 登録日 2011-11-01 公開日 2012-01-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Structure of Hdac3 Bound to Co-Repressor and Inositol Tetraphosphate. Nature, 481, 2012
8TOF	Rpd3S bound to an H3K36Cme3 modified nucleosome 分子名称: Chromatin modification-related protein EAF3, DNA (176-MER), Histone H2A, ... 著者 Markert, J.W, Vos, S.M, Farnung, L. 登録日 2023-08-03 公開日 2024-01-17 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structure of the complete Saccharomyces cerevisiae Rpd3S-nucleosome complex. Nat Commun, 14, 2023
8W9E	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9C	Cryo-EM structure of the Rpd3S complex from budding yeast 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, POTASSIUM ION, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9F	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9D	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
7YI4	Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state 分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI2	Cryo-EM structure of Rpd3S in loose-state Rpd3S-NCP complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI3	Cryo-EM structure of Rpd3S in close-state Rpd3S-NCP complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI0	Cryo-EM structure of Rpd3S complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI5	Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state 分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
6Z6P	HDAC-PC-Nuc 分子名称: DNA (145-MER), HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, ... 著者 Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R. 登録日 2020-05-28 公開日 2021-02-17 実験手法 ELECTRON MICROSCOPY (4.43 Å) 主引用文献 Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies. Sci Adv, 7, 2021
7AOA	Structure of the extended MTA1/HDAC1/MBD2/RBBP4 NURD deacetylase complex 分子名称: Histone deacetylase 1, Histone-binding protein RBBP4, INOSITOL HEXAKISPHOSPHATE, ... 著者 Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R. 登録日 2020-10-14 公開日 2020-11-11 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (19.4 Å) 主引用文献 The topology of chromatin-binding domains in the NuRD deacetylase complex. Nucleic Acids Res., 48, 2020
7AO9	Structure of the core MTA1/HDAC1/MBD2 NURD deacetylase complex 分子名称: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Metastasis-associated protein MTA1, ... 著者 Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R. 登録日 2020-10-14 公開日 2020-11-11 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 The topology of chromatin-binding domains in the NuRD deacetylase complex. Nucleic Acids Res., 48, 2020
7AO8	Structure of the MTA1/HDAC1/MBD2 NURD deacetylase complex 分子名称: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Metastasis-associated protein MTA1, ... 著者 Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R. 登録日 2020-10-14 公開日 2020-11-11 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 The topology of chromatin-binding domains in the NuRD deacetylase complex. Nucleic Acids Res., 48, 2020
8HXX	Cryo-EM structure of the histone deacetylase complex Rpd3S 分子名称: Chromatin modification-related protein EAF3, Histone H3, Histone deacetylase RPD3, ... 著者 Cui, H, Wang, H. 登録日 2023-01-05 公開日 2023-09-27 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of histone deacetylase complex Rpd3S bound to nucleosome. Nat.Struct.Mol.Biol., 30, 2023
8HXY	Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome 分子名称: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ... 著者 Cui, H, Wang, H. 登録日 2023-01-05 公開日 2023-09-27 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of histone deacetylase complex Rpd3S bound to nucleosome. Nat.Struct.Mol.Biol., 30, 2023
8HY0	Composite cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome 分子名称: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ... 著者 Cui, H, Wang, H. 登録日 2023-01-05 公開日 2023-09-27 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of histone deacetylase complex Rpd3S bound to nucleosome. Nat.Struct.Mol.Biol., 30, 2023

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