PDB: 35756 件ウェブページステータス検索Chemie searchBIRD

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2WWC	3D-structure of the modular autolysin LytC from Streptococcus pneumoniae in complex with synthetic peptidoglycan ligand 分子名称: 1,4-BETA-N-ACETYLMURAMIDASE, CHOLINE ION, GLYCEROL 著者 Perez-Dorado, I, Sanles, R, Hermoso, J.A, Gonzalez, A, Garcia, A, Garcia, P, Garcia, J.L. 登録日 2009-10-22 公開日 2010-04-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Insights Into Pneumococcal Fratricide from the Crystal Structures of the Modular Killing Factor Lytc. Nat.Struct.Mol.Biol., 17, 2010
4NGL	Previously de-ionized HEW lysozyme batch crystallized in 0.6 M CoCl2 分子名称: CHLORIDE ION, COBALT (II) ION, Lysozyme C 著者 Benas, P, Legrand, L, Ries-Kautt, M. 登録日 2013-11-02 公開日 2014-05-28 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry. Acta Crystallogr.,Sect.D, 70, 2014
5ZED	Crystal structure of Kluyveromyces polyspora ADH (KpADH) mutant (E214V/T215S) 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized protein ADH 著者 Wang, Y, Zhou, J.Y, Hou, X.D, Xu, G.C, Wu, L, Rao, Y.J, ZHou, J.H, Ni, Y. 登録日 2018-02-27 公開日 2019-01-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.199 Å) 主引用文献 Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones. J. Am. Chem. Soc., 140, 2018
4S2Y	Structure of E. coli RppH bound to RNA and three magnesium ions 分子名称: CHLORIDE ION, MAGNESIUM ION, RNA (5'-R(*(APC)*GP*U)-3'), ... 著者 Vasilyev, N, Serganov, A. 登録日 2015-01-23 公開日 2015-02-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of RNA Complexes with the Escherichia coli RNA Pyrophosphohydrolase RppH Unveil the Basis for Specific 5'-End-dependent mRNA Decay. J.Biol.Chem., 290, 2015
2GVW	Structure of diisopropyl fluorophosphatase (DFPase) holoenzyme (RT) 分子名称: CALCIUM ION, Phosphotriesterase 著者 Chen, J.C.H, Blum, M.M. 登録日 2006-05-03 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Binding of a designed substrate analogue to diisopropyl fluorophosphatase: implications for the phosphotriesterase mechanism. J.Am.Chem.Soc., 128, 2006
6JVH	Crystal structure of human MTH1 in complex with compound MI0320 分子名称: 4-amino-6-fluoroquinoline-3-carbohydrazide, 7,8-dihydro-8-oxoguanine triphosphatase 著者 Peng, C, Cheng, Y.S. 登録日 2019-04-17 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Inhibitor development of MTH1 via high-throughput screening with fragment based library and MTH1 substrate binding cavity. Bioorg.Chem., 110, 2021
7Y5E	In situ single-PBS-PSII-PSI-LHCs megacomplex. 分子名称: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... 著者 You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sui, S.F. 登録日 2022-06-17 公開日 2023-02-01 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex. Nature, 616, 2023
4NJO	crystal structure of cofactor(NAD+) bound 3-phosphoglycerate dehydrogenase in Entamoeba histolytica 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-3-phosphoglycerate dehydrogenase, putative, ... 著者 Singh, R.K, Gourinath, S. 登録日 2013-11-11 公開日 2014-10-08 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine. Febs J., 281, 2014
5ZF8	Structure of human dihydroorotate dehydrogenase in complex with 277-11-OAc 分子名称: (2S,3E,7E)-9-(3-chloro-5-formyl-2,6-dihydroxy-4-methylphenyl)-3,7-dimethylnona-3,7-dien-2-yl acetate, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ... 著者 Miyazaki, Y, Inaoka, K.D, Shiba, T, Saimoto, H, Amalia, E, Kido, Y, Sakai, C, Nakamura, M, Moore, L.A, Harada, S, Kita, K. 登録日 2018-03-02 公開日 2018-09-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Selective Cytotoxicity of Dihydroorotate Dehydrogenase Inhibitors to Human Cancer Cells Under Hypoxia and Nutrient-Deprived Conditions. Front Pharmacol, 9, 2018
7Y9P	Xylitol dehydrogenase S96C/S99C/Y102C mutant(thermostabilized form) from Pichia stipitis 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Yoshiwara, K, Watanabe, Y, Watanabe, S. 登録日 2022-06-25 公開日 2023-02-15 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular evolutionary insight of structural zinc atom in yeast xylitol dehydrogenases and its application in bioethanol production by lignocellulosic biomass. Sci Rep, 13, 2023
6CVC	Mycobacterium marinum cytochrome P450 CYP124A1 in the substrate-free form 分子名称: Cytochrome P450 124A1, Cyp124A1, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Child, S.A, Bruning, J.B, Bell, S.G. 登録日 2018-03-27 公開日 2019-03-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A comparison of the steroid binding cytochrome P450s from Mycobacterium marinum and Mycobacterium tuberculosis To Be Published
3EJL	Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability 分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, PHOSPHATE ION, Thymidylate synthase 著者 Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Pena, M.M, Berger, F.G, Berger, S.H. 登録日 2008-09-18 公開日 2010-03-02 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability . Biochemistry, 49, 2010
4NHP	X-ray structure of the complex between the hen egg white lysozyme and pentachlorocarbonyliridate (III) (4 days) 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ... 著者 Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A. 登録日 2013-11-05 公開日 2014-09-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release. Inorg.Chem., 53, 2014
3KHM	Crystal structure of sterol 14alpha-demethylase (CYP51) from Trypanosoma cruzi in complex with inhibitor fluconazole 分子名称: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, PROTOPORPHYRIN IX CONTAINING FE, Sterol 14 alpha-demethylase 著者 Lepesheva, G.I, Hargrove, T.Y, Anderson, S, Wawrzak, Z, Waterman, M.R. 登録日 2009-10-30 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural Insights into Inhibition of Sterol 14{alpha}-Demethylase in the Human Pathogen Trypanosoma cruzi. J.Biol.Chem., 285, 2010
4NHT	X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (6 days) 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ... 著者 Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A. 登録日 2013-11-05 公開日 2014-09-17 最終更新日 2015-06-24 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release. Inorg.Chem., 53, 2014
2GVV	Structure of diisopropyl fluorophosphatase (DFPase) in complex with dicyclopentylphosphoroamidate (DcPPA) 分子名称: CALCIUM ION, DICYCLOPENTYL PHOSPHORAMIDATE, Phosphotriesterase 著者 Chen, J.C.H, Blum, M.M. 登録日 2006-05-03 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Binding of a designed substrate analogue to diisopropyl fluorophosphatase: implications for the phosphotriesterase mechanism. J.Am.Chem.Soc., 128, 2006
3KHU	Crystal structure of human UDP-glucose dehydrogenase Glu161Gln, in complex with thiohemiacetal intermediate 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, UDP-glucose 6-dehydrogenase, ... 著者 Chaikuad, A, Egger, S, Yue, W.W, Guo, K, Sethi, R, Filippakopoulos, P, Muniz, J.R.C, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Kavanagh, K.L, Nidetzky, B, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2009-10-30 公開日 2009-11-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Kinetic Evidence That Catalytic Reaction of Human UDP-glucose 6-Dehydrogenase Involves Covalent Thiohemiacetal and Thioester Enzyme Intermediates. J.Biol.Chem., 287, 2012
6CVM	Atomic resolution cryo-EM structure of beta-galactosidase 分子名称: 2-phenylethyl 1-thio-beta-D-galactopyranoside, Beta-galactosidase, MAGNESIUM ION, ... 著者 Subramaniam, S, Bartesaghi, A, Banerjee, S, Zhu, X, Milne, J.L.S. 登録日 2018-03-28 公開日 2018-05-30 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (1.9 Å) 主引用文献 Atomic Resolution Cryo-EM Structure of beta-Galactosidase. Structure, 26, 2018
5ZH9	Crystal Structures of Mutant Endo-beta-1,4-xylanase II (Y88F) 分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION 著者 Zhang, X, Wan, Q. 登録日 2018-03-12 公開日 2019-03-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Crystal Structures of Mutant Endo-beta-1,4-xylanase II To be published
4NMC	Crystal structure of oxidized proline utilization A (PutA) from Geobacter sulfurreducens PCA complexed with Zwittergent 3-12 分子名称: (2S)-2-HYDROXYPROPANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE, ... 著者 Singh, H, Tanner, J.J. 登録日 2013-11-14 公開日 2014-02-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.901 Å) 主引用文献 Structures of the PutA peripheral membrane flavoenzyme reveal a dynamic substrate-channeling tunnel and the quinone-binding site. Proc.Natl.Acad.Sci.USA, 111, 2014
2X2J	Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin 分子名称: 1-DEOXYNOJIRIMYCIN, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, CHLORIDE ION, ... 著者 Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W. 登録日 2010-01-13 公開日 2011-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism. J.Biol.Chem., 288, 2013
5ZIW	Crystal Structures of Mutant Endo-beta-1,4-xylanase(Y77F) 分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION 著者 Zhang, X, Wan, Q. 登録日 2018-03-17 公開日 2019-03-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal Structures of Endo-beta-1,4-xylanase II to be published
4S0Z	Crystal structure of M26V human DJ-1 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Protein DJ-1 著者 Milkovic, N.M, Wilson, M.A. 登録日 2015-01-07 公開日 2015-08-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Transient sampling of aggregation-prone conformations causes pathogenic instability of a parkinsonian mutant of DJ-1 at physiological temperature. Protein Sci., 24, 2015
6CXV	Structure of the S167H mutant of human indoleamine 2,3 dioxygenase in complex with tryptophan and cyanide 分子名称: 2-(1H-indol-3-yl)ethanol, CYANIDE ION, Indoleamine 2,3-dioxygenase 1, ... 著者 Lewis-Ballester, A, Yeh, S.-R, Karkashon, S, Batabyal, D, Poulos, T.L. 登録日 2018-04-04 公開日 2018-06-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Inhibition Mechanisms of Human Indoleamine 2,3 Dioxygenase 1. J. Am. Chem. Soc., 140, 2018
5ZI2	MDH3 wild type, nad-form 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ... 著者 Moriyama, S, Nishio, K, Mizushima, T. 登録日 2018-03-14 公開日 2018-10-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of glyoxysomal malate dehydrogenase (MDH3) from Saccharomyces cerevisiae. Acta Crystallogr F Struct Biol Commun, 74, 2018

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