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4WBU
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prion peptide
分子名称: PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-09-03
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
6E5J
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BU of 6e5j by Molmil
Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn, beta3 helix, N-methyl hairpin
分子名称: Designed peptide NC_HEE_D1: Aib turn, beta3 helix, N-methyl hairpin mutant
著者Cabalteja, C.C, Mihalko, D.S, Horne, W.S.
登録日2018-07-20
公開日2018-11-21
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein.
Chembiochem, 20, 2019
4W5P
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Prp peptide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-18
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.151 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
4W67
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BU of 4w67 by Molmil
Crystal structure of Prp peptide
分子名称: PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-20
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.001 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
4GN5
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BU of 4gn5 by Molmil
OBody AM3L15 bound to hen egg-white lysozyme
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, GLYCEROL, ...
著者Steemson, J.D, Liddament, M.T.
登録日2012-08-16
公開日2013-08-21
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Plos One, 9, 2014
4GN4
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OBody AM2EP06 bound to hen egg-white lysozyme
分子名称: GLYCEROL, Lysozyme C, OBody AM2EP06
著者Steemson, J.D, Liddament, M.T.
登録日2012-08-16
公開日2013-08-21
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (1.861 Å)
主引用文献Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Plos One, 9, 2014
4V3Q
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BU of 4v3q by Molmil
Designed armadillo repeat protein with 4 internal repeats, 2nd generation C-cap and 3rd generation N-cap.
分子名称: CALCIUM ION, GLYCEROL, YIII_M4_AII
著者Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P.
登録日2014-10-20
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of designed armadillo-repeat proteins show propagation of inter-repeat interface effects.
Acta Crystallogr D Struct Biol, 72, 2016
4GPM
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BU of 4gpm by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR264.
分子名称: Engineered Protein OR264
著者Vorobiev, S, Su, M, Parmeggiani, F, Seetharaman, J, Huang, P.-S, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2012-08-21
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Computational design of self-assembling cyclic protein homo-oligomers.
NAT.CHEM., 9, 2017
4W71
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Crystal structure of a prion peptide
分子名称: PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-21
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
4V8W
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Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex
分子名称: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE
著者Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M.
登録日2013-04-18
公開日2014-07-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (17.5 Å)
主引用文献Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex.
Structure, 21, 2013
4V8V
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Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex
分子名称: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE
著者Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M.
登録日2013-04-18
公開日2014-07-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex.
Structure, 21, 2013
8F6Q
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CryoEM structure of designed modular protein oligomer C8-71
分子名称: C8-71
著者Redler, R.L, Edman, N.I, Baker, D, Ekiert, D, Bhabha, G.
登録日2022-11-17
公開日2023-11-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies.
Biorxiv, 2023
1EM7
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BU of 1em7 by Molmil
HELIX VARIANT OF THE B1 DOMAIN FROM STREPTOCOCCAL PROTEIN G
分子名称: PROTEIN G
著者Strop, P, Marinescu, A.M, Mayo, S.L.
登録日2000-03-16
公開日2002-05-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a protein G helix variant suggests the importance of helix propensity and helix dipole interactions in protein design.
Protein Sci., 9, 2000
3M3A
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BU of 3m3a by Molmil
The roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin: Cu(II)-I107E FeBMb (Cu(II) binding to FeB site)
分子名称: COPPER (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M39
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BU of 3m39 by Molmil
The roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin: Fe(II)-I107E FeBMb (Fe(II) binding to FeB site)
分子名称: FE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M22
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BU of 3m22 by Molmil
Crystal structure of TagRFP fluorescent protein
分子名称: TagRFP
著者Malashkevich, V.N, Subach, O.M, Ramagopal, U.A, Almo, S.C, Verkhusha, V.V.
登録日2010-03-06
公開日2010-05-12
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins.
Chem.Biol., 17, 2010
3M38
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BU of 3m38 by Molmil
The roles of Glutamates and Metal ions in a rationally designed nitric oxide reductase based on myoglobin: I107E FeBMb (No metal ion binding to FeB site)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MIS
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BU of 3mis by Molmil
I-MsoI re-designed for altered DNA cleavage specificity (-8G)
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*GP*AP*GP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*CP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*GP*GP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*CP*TP*CP*CP*G)-3'), ...
著者Taylor, G.K, Stoddard, B.L.
登録日2010-04-12
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairs.
Nucleic Acids Res., 38, 2010
5IM5
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BU of 5im5 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I53-40
分子名称: Designed Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase, Designed Riboflavin synthase
著者Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
登録日2016-03-05
公開日2016-07-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.699 Å)
主引用文献Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
1FME
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BU of 1fme by Molmil
SOLUTION STRUCTURE OF FSD-EY, A NOVEL PEPTIDE ASSUMING A BETA-BETA-ALPHA FOLD
分子名称: FSD-EY PEPTIDE
著者Sarisky, C.A, Mayo, S.L.
登録日2000-08-16
公開日2001-04-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The beta-beta-alpha fold: explorations in sequence space.
J.Mol.Biol., 307, 2001
7RX5
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BU of 7rx5 by Molmil
Cryo-EM reconstruction of Form1-N2 nanotube (Form I like)
分子名称: F1-N2 nanotube
著者Wang, F, Gnewou, O.M, Solemanifar, A, Xu, C, Egelman, E.H, Conticello, V.P.
登録日2021-08-21
公開日2021-09-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM of Helical Polymers.
Chem.Rev., 122, 2022
5HS0
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BU of 5hs0 by Molmil
Computationally Designed Cyclic Tetramer ank1C4_7
分子名称: Ankyrin domain protein ank1C4_7, GLYCEROL, SULFATE ION
著者McNamara, D.E, Cascio, D, Fallas, J.A, Baker, D, Yeates, T.O.
登録日2016-01-24
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
4PIV
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BU of 4piv by Molmil
Human Fatty Acid Synthase Psi/KR Tri-Domain with NADPH and GSK2194069
分子名称: 4-[4-(1-benzofuran-5-yl)phenyl]-5-{[(3S)-1-(cyclopropylcarbonyl)pyrrolidin-3-yl]methyl}-2,4-dihydro-3H-1,2,4-triazol-3-one, CACODYLATE ION, Fatty acid synthase, ...
著者Williams, S.P, Wang, L, Brown, K.K, Parrish, C.A, Hardwicke, M.A.
登録日2014-05-09
公開日2014-07-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献A human fatty acid synthase inhibitor binds beta-ketoacyl reductase in the keto-substrate site.
Nat.Chem.Biol., 10, 2014
6REI
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BU of 6rei by Molmil
Crystal structure of Pizza6-S with Cd2+
分子名称: CADMIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Noguchi, H, Clarke, D.E, Gryspeerdt, J.L, Feyter, S.D, Voet, A.R.D.
登録日2019-04-12
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Artificial beta-Propeller Protein-based Hydrolases
To Be Published
6REM
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Crystal structure of Pizza6-SH with Sulphate ion
分子名称: Pizza6-SH, SULFATE ION
著者Noguchi, H, Clarke, D.E, Gryspeerdt, J.L, Feyter, S.D, Voet, A.R.D.
登録日2019-04-12
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Artificial beta-Propeller Protein-based Hydrolases
To Be Published

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件を2024-07-17に公開中

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