PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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4OUB	A 2.20 angstroms X-ray crystal structure of E268A 2-aminomucaonate 6-semialdehyde dehydrogenase catalytic intermediate from Pseudomonas fluorescens 分子名称: (2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Huo, L, Liu, A. 登録日 2014-02-15 公開日 2014-12-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun, 6, 2015
4OE2	2.00 Angstroms X-ray crystal structure of E268A 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens 分子名称: 2-aminomuconate 6-semialdehyde dehydrogenase, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Huo, L, Davis, I, Liu, F, Esaki, S, Iwaki, H, Hasegawa, Y, Liu, A. 登録日 2014-01-11 公開日 2014-12-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun, 6, 2015
4OF8	Crystal Structure of Rst D1-D2 分子名称: GLYCEROL, Irregular chiasm C-roughest protein, SODIUM ION 著者 Ozkan, E, Garcia, K.C. 登録日 2014-01-14 公開日 2014-02-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.902 Å) 主引用文献 Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.), 156, 2014
3PQH	Crystal structure of the C-terminal fragment of the bacteriophage phi92 membrane-piercing protein gp138 分子名称: FE (III) ION, SODIUM ION, gene product 138 著者 Browning, C, Shneider, M, Leiman, P.G. 登録日 2010-11-26 公開日 2012-02-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.295 Å) 主引用文献 Phage pierces the host cell membrane with the iron-loaded spike. Structure, 20, 2012
4OHC	Crystal structure of orotate phosphoribosyltransferase (OPRTase) from Burkholderia cenocepacia 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Orotate phosphoribosyltransferase, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2014-01-17 公開日 2014-02-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of orotate phosphoribosyltransferase (OPRTase) from Burkholderia cenocepacia To be Published
6TGH	SHMT from Streptococcus thermophilus Tyr55Thr variant in complex with D-Serine both as external aldimine and as non-covalent complex 分子名称: D-SERINE, L-Serine, N-[[3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]-4-pyridinyl]methylene], ... 著者 Petrillo, G, Hernandez, K, Bujons, J, Clapes, P, Uson, I. 登録日 2019-11-15 公開日 2020-06-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural insights into nucleophile substrate specificity in variants of N-Serine hydroxymethyltransferase from Streptococcus thermophilus To Be Published
3BPX	Crystal Structure of MarR 分子名称: 2-HYDROXYBENZOIC ACID, SODIUM ION, Transcriptional regulator 著者 Saridakis, V, Shahinas, D, Xu, X, Christendat, D. 登録日 2007-12-19 公開日 2008-05-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
2WPC	Trypanosoma brucei trypanothione reductase in complex with 3,4- dihydroquinazoline inhibitor (DDD00073357) 分子名称: (4S)-6-CHLORO-3-{2-[4-(FURAN-2-YLCARBONYL)PIPERAZIN-1-YL]ETHYL}-2-METHYL-4-PHENYL-3,4-DIHYDROQUINAZOLINE, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Alphey, M.S, Patterson, S, Fairlamb, A.H. 登録日 2009-08-05 公開日 2010-10-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Dihydroquinazolines as a Novel Class of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, and Characterization of Their Binding Mode by Protein Crystallography. J.Med.Chem., 54, 2011
4TQE	Structure of tau peptide in complex with Tau5 antibody Fab fragment 分子名称: Fab heavy chain, If kappa light chain, Microtubule-associated protein tau, ... 著者 Cehlar, O, Skrabana, R, Novak, M. 登録日 2014-06-11 公開日 2015-07-29 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of tau peptide in complex with Tau5 antibody Fab fragment To Be Published
3O52	Structure of the E.coli GDP-mannose hydrolase (yffh) in complex with tartrate 分子名称: CHLORIDE ION, D(-)-TARTARIC ACID, GDP-mannose pyrophosphatase nudK, ... 著者 Amzel, L.M, Gabelli, S.B, Boto, A.N. 登録日 2010-07-27 公開日 2011-05-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural studies of the Nudix GDP-mannose hydrolase from E. coli reveals a new motif for mannose recognition. Proteins, 79, 2011
4RQ3	Precatalytic ternary complex of Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG) and dATP in the presence of CaCl2 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ACETATE ION, CALCIUM ION, ... 著者 Vyas, R, Suo, Z. 登録日 2014-10-31 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
4RQ7	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dATP soaked with MgCl2 for 1hr 分子名称: ACETATE ION, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Vyas, R, Reed, A.J, Suo, Z. 登録日 2014-10-31 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
5OWO	Human cytoplasmic Dynein N-Terminus dimerization domain at 1.8 Angstrom resolution 分子名称: CALCIUM ION, Cytoplasmic dynein 1 heavy chain 1, GLYCEROL, ... 著者 Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P. 登録日 2017-09-01 公開日 2018-07-11 最終更新日 2022-03-30 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Cryo-EM shows how dynactin recruits two dyneins for faster movement. Nature, 554, 2018
4TOG	1.80A resolution structure of BfrB (C89S, K96C) crystal form 2 from Pseudomonas aeruginosa 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Bacterioferritin, POTASSIUM ION, ... 著者 Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M. 登録日 2014-06-05 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic. Biochemistry, 54, 2015
4RPZ	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dCTP soaked with MgCl2 for 60 s 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Vyas, R, Reed, A.J, Suo, Z. 登録日 2014-10-31 公開日 2015-04-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
3G8Q	A cytidine deaminase edits C-to-U in transfer RNAs in archaea 分子名称: Predicted RNA-binding protein, contains THUMP domain, SODIUM ION, ... 著者 Xiong, Y, Stanley, B.J. 登録日 2009-02-12 公開日 2009-05-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A cytidine deaminase edits C to U in transfer RNAs in Archaea Science, 324, 2009
244D	THE HIGH-RESOLUTION CRYSTAL STRUCTURE OF A PARALLEL-STRANDED GUANINE TETRAPLEX 分子名称: CALCIUM ION, DNA (5'-D(*TP*GP*GP*GP*GP*T)-3'), SODIUM ION 著者 Laughlan, G, Murchie, A.I.H, Norman, D.G, Moore, M.H, Moody, P.C.E, Lilley, D.M.J, Luisi, B. 登録日 1995-10-19 公開日 1996-02-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 The high-resolution crystal structure of a parallel-stranded guanine tetraplex. Science, 265, 1994
2Q16	Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with ITP 分子名称: CALCIUM ION, HAM1 protein homolog, INOSINE 5'-TRIPHOSPHATE, ... 著者 Singer, A.U, Lam, R, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F. 登録日 2007-05-23 公開日 2008-02-19 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli. J.Mol.Biol., 374, 2007
3OIB	Crystal structure of a putative ACYL-COA Dehydrogenase from mycobacterium smegmatis, Iodide soak 分子名称: 1,2-ETHANEDIOL, Acyl-CoA dehydrogenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-08-18 公開日 2010-09-01 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 SAD phasing using iodide ions in a high-throughput structural genomics environment. J Struct Funct Genomics, 12, 2011
4Q05	Crystal structure of an esterase E25 分子名称: SODIUM ION, esterase E25 著者 Li, P.Y, Li, C.Y, Zhang, Y.Z. 登録日 2014-03-31 公開日 2014-06-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural basis for dimerization and catalysis of a novel esterase from the GTSAG motif subfamily of the bacterial hormone-sensitive lipase family J.Biol.Chem., 289, 2014
4RNE	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions 分子名称: CALCIUM ION, RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), SODIUM ION, ... 著者 Fyfe, A.C, Dunten, P.W, Scott, W.G. 登録日 2014-10-24 公開日 2014-11-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.01 Å) 主引用文献 Structural Variations and Solvent Structure of r(UGGGGU) Quadruplexes Stabilized by Sr(2+) Ions. J.Mol.Biol., 427, 2015
2QZ7	The crystal structure of a homologue of telluride resistance protein (TerD), SCO6318 from Streptomyces coelicolor A3(2) 分子名称: 1,2-ETHANEDIOL, SODIUM ION, Uncharacterized protein SCO6318 著者 Tan, K, Xu, X, Zheng, Z, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2007-08-16 公開日 2007-08-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The crystal structure of a homologue of telluride resistance protein (TerD), SCO6318 from Streptomyces coelicolor A3(2). To be Published
4S0N	Crystal Structure of HLTF HIRAN Domain bound to DNA 分子名称: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', GLYCEROL, Helicase-like transcription factor, ... 著者 Chavez, D.A, Eichman, B.F. 登録日 2015-01-02 公開日 2015-05-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 HLTF's Ancient HIRAN Domain Binds 3' DNA Ends to Drive Replication Fork Reversal. Mol.Cell, 58, 2015
3CMD	Crystal structure of peptide deformylase from VRE-E.faecium 分子名称: FE (III) ION, MALONATE ION, Peptide deformylase, ... 著者 Hwang, K.Y, Nam, K.H. 登録日 2008-03-21 公開日 2009-01-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Insight into the antibacterial drug design and architectural mechanism of peptide recognition from the E. faecium peptide deformylase structure. Proteins, 74, 2009
2R20	Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.3 A (Br2) 分子名称: MAGNESIUM ION, RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3'), SODIUM ION 著者 Timsit, Y, Bombard, S. 登録日 2007-08-24 公開日 2007-09-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): Metal ion binding correlates with base unstacking and groove contraction. Rna, 13, 2007

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