Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8Y0X
DownloadVisualize
BU of 8y0x by Molmil
Dormant ribosome with SERBP1
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Du, M, Zeng, F.
登録日2024-01-23
公開日2024-02-07
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Implication of Stm1 in the protection of eIF5A, eEF2 and tRNA through dormant ribosomes.
Front Mol Biosci, 11, 2024
8Y0U
DownloadVisualize
BU of 8y0u by Molmil
dormant ribosome with STM1
分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S1-A, ...
著者Du, M, Zeng, F.
登録日2024-01-23
公開日2024-02-07
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献Implication of Stm1 in the protection of eIF5A, eEF2 and tRNA through dormant ribosomes.
Front Mol Biosci, 11, 2024
8Y0W
DownloadVisualize
BU of 8y0w by Molmil
dormant ribosome with eIF5A, eEF2 and SERBP1
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Du, M, Zeng, F.
登録日2024-01-23
公開日2024-02-07
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Implication of Stm1 in the protection of eIF5A, eEF2 and tRNA through dormant ribosomes.
Front Mol Biosci, 11, 2024
8Y6B
DownloadVisualize
BU of 8y6b by Molmil
Structure of human LGI1-ADAM22 complex in space group P212121
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ...
著者Liu, H, Xu, F.
登録日2024-02-02
公開日2024-02-14
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure of human LGI1-ADAM22 complex in space group P212121
To Be Published
8XGC
DownloadVisualize
BU of 8xgc by Molmil
Structure of yeast replisome associated with FACT and histone hexamer, Composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, Chromosome segregation in meiosis protein 3, ...
著者Li, N, Gao, Y, Yu, D, Gao, N, Zhai, Y.
登録日2023-12-15
公開日2024-02-14
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Parental histone transfer caught at the replication fork.
Nature, 627, 2024
6PXK
DownloadVisualize
BU of 6pxk by Molmil
3.65 Angstroms resolution structure of HslU with an axial-channel plug
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU, SULFATE ION, ...
著者Baytshtok, V, Grant, R.A, Sauer, R.T.
登録日2019-07-26
公開日2020-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.647 Å)
主引用文献Heat activates the AAA+ HslUV protease by melting an axial autoinhibitory plug.
Cell Rep, 34, 2021
6PZ5
DownloadVisualize
BU of 6pz5 by Molmil
Crystal Structure of HLA-B*2703 in complex with LRN, a self-peptide
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B*27:03 alpha chain, ...
著者Gras, S.
登録日2019-07-31
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Allelic association with ankylosing spondylitis fails to correlate with human leukocyte antigen B27 homodimer formation.
J.Biol.Chem., 294, 2019
6YN1
DownloadVisualize
BU of 6yn1 by Molmil
Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
分子名称: Aprataxin and PNK-like factor, CHLORIDE ION, GLYCEROL, ...
著者Corbeski, I, Guo, X, Van Ingen, H, Sixma, T.K.
登録日2020-04-10
公開日2021-11-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.
Sci Adv, 8, 2022
6Q07
DownloadVisualize
BU of 6q07 by Molmil
MERS-CoV S structure in complex with 2,6-sialyl-N-acetyl-lactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FOLIC ACID, ...
著者Park, Y.J, Walls, A.C, Wang, Z, Sauer, M, Li, W, Tortorici, M.A, Bosch, B.J, DiMaio, F.D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-08-01
公開日2019-12-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
8XB8
DownloadVisualize
BU of 8xb8 by Molmil
The structure of ASFV A137R
分子名称: A137R
著者Li, C, Song, H, Gao, G.F.
登録日2023-12-06
公開日2024-01-31
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献African swine fever virus A137R assembles into a dodecahedron cage.
J.Virol., 98, 2024
6CB3
DownloadVisualize
BU of 6cb3 by Molmil
Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium
分子名称: BARIUM ION, CADMIUM ION, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Bachas, S, Ferre-D'amare, A.R.
登録日2018-02-01
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.891 Å)
主引用文献Convergent Use of Heptacoordination for Cation Selectivity by RNA and Protein Metalloregulators.
Cell Chem Biol, 25, 2018
5L5A
DownloadVisualize
BU of 5l5a by Molmil
Yeast 20S proteasome with human beta5i (1-138; R57T)
分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
6Q16
DownloadVisualize
BU of 6q16 by Molmil
Focussed refinement of InvGN0N1:PrgHK:SpaPQR:PrgIJ from Salmonella SPI-1 injectisome NC-base
分子名称: Lipoprotein PrgK, Protein InvG, Protein PrgH, ...
著者Hu, J, Worrall, L.J, Strynadka, N.C.J.
登録日2019-08-02
公開日2019-10-23
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly.
Nat Microbiol, 4, 2019
5L5U
DownloadVisualize
BU of 5l5u by Molmil
Yeast 20S proteasome with human beta5i (1-138; V31M) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 17
分子名称: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, CHLORIDE ION, MAGNESIUM ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
2LXG
DownloadVisualize
BU of 2lxg by Molmil
NMR solution structure of Mu-conotoxin KIIIA
分子名称: Mu-conotoxin KIIIA
著者Khoo, K.K, Norton, R.S.
登録日2012-08-21
公開日2013-02-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Distinct disulfide isomers of mu-conotoxins KIIIA and KIIIB block voltage-gated sodium channels.
Biochemistry, 51, 2012
6CC9
DownloadVisualize
BU of 6cc9 by Molmil
NMR data-driven model of GTPase KRas-GMPPNP:Cmpd2 complex tethered to a nanodisc
分子名称: (2R,4S)-4-[(5-bromo-1H-indole-3-carbonyl)amino]-2-[(4-chlorophenyl)methyl]piperidin-1-ium, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, ...
著者Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
登録日2018-02-06
公開日2018-09-05
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
8WXB
DownloadVisualize
BU of 8wxb by Molmil
Cryo-EM structure of the alpha-carboxysome shell vertex from Prochlorococcus MED4
分子名称: Carboxysome assembly protein CsoS2, Carboxysome shell vertex protein CsoS4A, Major carboxysome shell protein CsoS1
著者Jiang, Y.L, Zhou, R.Q, Zhou, C.Z, Zeng, Q.L.
登録日2023-10-28
公開日2024-01-31
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure and assembly of the alpha-carboxysome in the marine cyanobacterium Prochlorococcus.
Nat.Plants, 10, 2024
5L69
DownloadVisualize
BU of 5l69 by Molmil
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 16
分子名称: (2~{S})-3-(1~{H}-indol-3-yl)-~{N}-[(2~{S},3~{S},4~{R})-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2~{R})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
6Y0G
DownloadVisualize
BU of 6y0g by Molmil
Structure of human ribosome in classical-PRE state
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A.
登録日2020-02-07
公開日2020-04-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes.
Cell Rep, 31, 2020
6Q8O
DownloadVisualize
BU of 6q8o by Molmil
Respiratory complex I from Thermus thermophilus with bound Piericidin A
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
登録日2018-12-15
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.605 Å)
主引用文献Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6FYX
DownloadVisualize
BU of 6fyx by Molmil
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-03-12
公開日2018-12-05
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6CAP
DownloadVisualize
BU of 6cap by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
To Be Published
6QC6
DownloadVisualize
BU of 6qc6 by Molmil
Ovine respiratory complex I FRC open class 1
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ...
著者Letts, J.A, Sazanov, L.A.
登録日2018-12-27
公開日2019-08-21
最終更新日2019-10-02
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk.
Mol.Cell, 75, 2019
6FP6
DownloadVisualize
BU of 6fp6 by Molmil
Complex of human Cu,Zn SOD1 with the human copper chaperone for SOD1 in a compact conformation
分子名称: Copper chaperone for superoxide dismutase, GLYCEROL, PROPANOIC ACID, ...
著者Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
登録日2018-02-09
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
2MJQ
DownloadVisualize
BU of 2mjq by Molmil
Structure of antimicrobial peptide anoplin in DPC micelles
分子名称: Anoplin, UNKNOWN ATOM OR ION, dodecyl 2-(trimethylammonio)ethyl phosphate
著者Uggerhoej, L, Poulsen, T.J, Wimmer, R.
登録日2014-01-16
公開日2014-12-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rational Design of Alpha-Helical Antimicrobial Peptides: Do's and Don'ts.
Chembiochem, 16, 2015

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon