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6U8I
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BRD4-BD2 in complex with the cyclic peptide 3.2_2
分子名称: AMINO GROUP, Bromodomain-containing protein 4, cyclic peptide 3.2_2
著者Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
登録日2019-09-05
公開日2020-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
7CXC
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BU of 7cxc by Molmil
Structure of mouse Galectin-3 CRD point mutant (V160A) in complex with TD-139 belonging to P121 space group.
分子名称: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, Galectin-3
著者Kumar, A.
登録日2020-09-01
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Molecular mechanism of interspecies differences in the binding affinity of TD139 to Galectin-3.
Glycobiology, 31, 2021
7CWJ
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Root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens
分子名称: GLYCEROL, Root induced effector protein Tsp1
著者Gupta, G.D.
登録日2020-08-28
公開日2021-09-01
最終更新日2021-10-06
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structure-function analysis reveals Trichoderma virens Tsp1 to be a novel fungal effector protein modulating plant defence.
Int.J.Biol.Macromol., 191, 2021
7CTL
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BU of 7ctl by Molmil
Crystal structure of NADH bound holo form of alpha-glucuronidase (TM0752) from Thermotoga maritima at 1.97 Angstrom resolution
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative
著者Manoj, N, Mohapatra, B.S.
登録日2020-08-19
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4.
Biochem.J., 478, 2021
6UDR
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S2 symmetric peptide design number 3 crystal form 1, Lurch
分子名称: S2-3, Lurch crystal form 1
著者Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
登録日2019-09-19
公開日2020-09-23
最終更新日2020-12-02
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
7CTM
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BU of 7ctm by Molmil
Crystal structure of Thermotoga maritima alpha-glucuronidase (TM0752) in complex with NADH and D-glucuronic acid
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative, ...
著者Manoj, N, Mohapatra, B.S.
登録日2020-08-19
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4.
Biochem.J., 478, 2021
7CWP
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BU of 7cwp by Molmil
Root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens
分子名称: Root induced signalling protein
著者Gupta, G.D.
登録日2020-08-29
公開日2021-09-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens
To Be Published
6UGN
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BU of 6ugn by Molmil
Human Carbonic Anhydrase 2 complexed with SB4-205
分子名称: 5,7-dimethyl-1lambda~6~,2,4-benzothiadiazine-1,1,3(2H,4H)-trione, Carbonic anhydrase 2, ZINC ION
著者Murray, A.B, Supuran, C.T, McKenna, R.
登録日2019-09-26
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.406 Å)
主引用文献"A Sweet Combination": Developing Saccharin and Acesulfame K Structures for Selectively Targeting the Tumor-Associated Carbonic Anhydrases IX and XII.
J.Med.Chem., 63, 2020
6UHU
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BU of 6uhu by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 5-[(3-aminopropyl)amino]pentylboronic acid
分子名称: 5-(3-azanylpropylamino)pentyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, PHOSPHATE ION, POTASSIUM ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2019-09-28
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Binding ofN8-Acetylspermidine Analogues to Histone Deacetylase 10 Reveals Molecular Strategies for Blocking Polyamine Deacetylation.
Biochemistry, 58, 2019
7DKN
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BU of 7dkn by Molmil
Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase
分子名称: Methylated-DNA--protein-cysteine methyltransferase, SULFATE ION
著者Kikuchi, M, Yamauchi, T, Iizuka, Y, Tsunoda, M.
登録日2020-11-25
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase.
Acta Crystallogr.,Sect.F, 77, 2021
7DKP
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BU of 7dkp by Molmil
Crystal structure of E. coli Grx2 in complex with GSH at 1.45 A resolution
分子名称: CITRATE ANION, GLUTATHIONE, Glutaredoxin
著者Sreekumar, S.N, Arockiasamy, A.
登録日2020-11-25
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of E. coli Grx2 in complex with GSH at 1.45 A resolution
To Be Published
7DRK
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BU of 7drk by Molmil
Crystal structure of phosphatidylglycerol phosphate synthase in complex with cytidine diphosphate-diacylglycerol
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,4-BUTANEDIOL, 5'-O-[(R)-{[(S)-{(2R)-2,3-bis[(9E)-octadec-9-enoyloxy]propoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine, ...
著者Yang, B.W, Liu, Z.F.
登録日2020-12-28
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The phosphatidylglycerol phosphate synthase PgsA utilizes a trifurcated amphipathic cavity for catalysis at the membrane-cytosol interface.
Curr Res Struct Biol, 3, 2021
7D8E
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BU of 7d8e by Molmil
Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09
分子名称: 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
著者Dileep, K.V, Ihara, K, Sakai, N, Shirozu, M, Zhang, K.Y.J.
登録日2020-10-08
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09
To Be Published
7DRJ
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BU of 7drj by Molmil
Crystal structure of phosphatidylglycerol phosphate synthase in complex with phosphatidylglycerol phosphate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,4-BUTANEDIOL, ACETIC ACID, ...
著者Yang, B.W, Liu, Z.F.
登録日2020-12-28
公開日2021-12-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The phosphatidylglycerol phosphate synthase PgsA utilizes a trifurcated amphipathic cavity for catalysis at the membrane-cytosol interface.
Curr Res Struct Biol, 3, 2021
7DMM
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BU of 7dmm by Molmil
Structure of a glucose isomerase crystal grown in an aqueous glycerol solution without any precipitants
分子名称: CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ...
著者Suzuki, Y, Maita, N.
登録日2020-12-04
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Extraordinarily fast growth of high-quality glucose isomerase crystals simply by concentration in a precipitant-free solution with a cryoprotectant
To be published
7DQR
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BU of 7dqr by Molmil
Crystal structure of Sulfurisphaera tokodaii methylated O6-methylguanine methyltransferase
分子名称: Methylated-DNA--protein-cysteine methyltransferase, SULFATE ION
著者Kikuchi, M, Yamauchi, T, Iizuka, Y, Tsonoda, M.
登録日2020-12-24
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase.
Acta Crystallogr.,Sect.F, 77, 2021
7DQQ
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Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase Y91F/C120S variant in complex with O6-methyldeoxyguanosine
分子名称: (2~{R},3~{S},5~{R})-5-(2-azanyl-6-methoxy-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol, Methylated-DNA--protein-cysteine methyltransferase
著者Kikuchi, M, Yamauchi, T, Iizuka, Y, Tsunoda, M.
登録日2020-12-24
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase.
Acta Crystallogr.,Sect.F, 77, 2021
7DQT
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BU of 7dqt by Molmil
Crystal structure of O6-methylguanine methyltransferase Y91F variant
分子名称: Methylated-DNA--protein-cysteine methyltransferase, SULFATE ION
著者Kikuchi, M, Iizuka, Y, Yamauchi, T, Tsunoda, M.
登録日2020-12-24
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Roles of the hydroxy group of tyrosine in crystal structures of Sulfurisphaera tokodaii O6-methylguanine-DNA methyltransferase.
Acta Crystallogr.,Sect.F, 77, 2021
7DPO
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BU of 7dpo by Molmil
Crystal Structure of BRD2(BD2)with Ligand ZB-BD-224 bound
分子名称: 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4,5-dihydro-2,3a1,5-triazadibenzo[cd,h]azulen-1(2H)-one, Bromodomain-containing protein 2
著者Li, Z, Lu, T, Chen, P, Luo, C, Zhou, B.
登録日2020-12-21
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29994035 Å)
主引用文献Structure Base Design of A new chemotype of Four-Cycle Compounds as Bromodomain and Extra-Terminal (BET) Inhibitors with The Second Bromodomain Bias and Highly Anti-inflammatory Potency
To Be Published
7DPN
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BU of 7dpn by Molmil
Crystal structure of BRD2(BD1)with ligand ZB-BD-224 bound
分子名称: 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4,5-dihydro-2,3a1,5-triazadibenzo[cd,h]azulen-1(2H)-one, Bromodomain-containing protein 2
著者Li, Z, Lu, T, Chen, P, Luo, C, Zhou, B.
登録日2020-12-20
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79998839 Å)
主引用文献Structure Base Design of A new chemotype of Four-Cycle Compounds as Bromodomain and Extra-Terminal (BET) Inhibitors with The Second Bromodomain Bias and Highly Anti-inflammatory Potency
To Be Published
7DSU
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BU of 7dsu by Molmil
Structure of Mod subunit of the Type III restriction-modification enzyme Mbo45V
分子名称: 1,2-ETHANEDIOL, Mbo45V, SINEFUNGIN
著者Ahmed, I, Chouhan, O.P, Gopinath, A, Morgan, R.D, Bhagat, K, Singh, A, Saikrishnan, K.
登録日2021-01-02
公開日2022-01-05
最終更新日2023-04-05
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Mod subunit of the Type III restriction-modification enzyme Mbo45V
To Be Published
7D66
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Crystal structure of retroviral protease-like domain of Ddi1 from Toxoplasma gondii
分子名称: GLYCEROL, Ubiquitin family protein
著者Biswas, I.B, Killivalavan, A.K, Suguna, K.S.
登録日2020-09-29
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.126 Å)
主引用文献Structural and functional insights into the DNA damage-inducible protein 1 (Ddi1) from protozoa.
Curr Res Struct Biol, 4, 2022
7DLM
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BU of 7dlm by Molmil
Short chain dehydrogenase (SCR) crystal structure with NADPH
分子名称: Carbonyl Reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, Y.H, Zhang, R.Z, Forouhar, F, Wang, C, Montelione, G.T, Szyperski, T, Xu, Y, Hunt, J.F.
登録日2020-11-28
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Oligomeric interactions maintain active-site structure in a noncooperative enzyme family.
Embo J., 41, 2022
7DLD
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BU of 7dld by Molmil
Crystal structures of (S)-carbonyl reductases from Candida parapsilosis in different oligomerization states
分子名称: Carbonyl Reductase, MAGNESIUM ION
著者Li, Y.H, Zhang, R.Z, Forouhar, F, Wang, C, Montelione, G.T, Szyperski, T, Xu, Y, Hunt, J.F.
登録日2020-11-27
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Oligomeric interactions maintain active-site structure in a noncooperative enzyme family.
Embo J., 41, 2022
7E5V
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BU of 7e5v by Molmil
Crystal structure of Phm7 in complex with inhibitor
分子名称: Diels-Alderase, GLYCEROL, SULFATE ION, ...
著者Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
登録日2021-02-20
公開日2021-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021

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件を2024-08-28に公開中

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