Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VLX
DownloadVisualize
BU of 3vlx by Molmil
Assimilatory nitrite reductase (Nii3) - N226K mutant - ligand free form from tobacco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-12-05
公開日2012-09-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献X-ray crystal structure of a mutant assimilatory nitrite reductase that shows sulfite reductase-like activity
Chem.Biodivers., 9, 2012
3VKI
DownloadVisualize
BU of 3vki by Molmil
Monoclinic Crystal Structure of Salmonella FlgA in closed form
分子名称: Flagella basal body P-ring formation protein flgA
著者Matsunami, H, Samatey, F.A, Namba, K.
登録日2011-11-16
公開日2012-11-21
最終更新日2016-07-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural flexibility of the periplasmic protein, FlgA, regulates flagellar P-ring assembly in Salmonella enterica
Sci Rep, 6, 2016
4K7B
DownloadVisualize
BU of 4k7b by Molmil
Crystal structure of Extrinsic protein in photosystem II
分子名称: Extrinsic protein in photosystem II, GLYCEROL, SULFATE ION
著者Nagao, R, Suga, M, Niikura, A, Okumura, A, Koua, F.H.M, Suzuki, T, Tomo, T, Enami, I, Shen, J.R.
登録日2013-04-16
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Psb31, a Novel Extrinsic Protein of Photosystem II from a Marine Centric Diatom and Implications for Its Binding and Function
Biochemistry, 52, 2013
3V7T
DownloadVisualize
BU of 3v7t by Molmil
Crystal Structure of Human Beta-Tryptase Complexed with a Synthetic Inhibitor with a Tropanylamide Scaffold
分子名称: CARBONATE ION, TPSB2 protein, {(3-exo)-3-[5-(aminomethyl)-2-fluorophenyl]-8-azabicyclo[3.2.1]oct-8-yl}(4-bromo-3-methyl-5-propoxythiophen-2-yl)methanone
著者Zhang, Y, Colonna, C, Michot, N.
登録日2011-12-22
公開日2012-03-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献A beta-tryptase inhibitor with a tropanylamide scaffold to improve in vitro stability and to lower hERG channel binding affinity
Bioorg.Med.Chem.Lett., 22, 2012
4DMW
DownloadVisualize
BU of 4dmw by Molmil
Crystal structure of the GT domain of Clostridium difficile toxin A (TcdA) in complex with UDP and Manganese
分子名称: MANGANESE (II) ION, Toxin A, URIDINE-5'-DIPHOSPHATE
著者Malito, E, D'Urzo, N, Bottomley, M.J, Biancucci, M, Scarselli, M, Maione, D, Martinelli, M.
登録日2012-02-08
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of Clostridium difficile toxin A glucosyltransferase domain bound to Mn2+ and UDP provides insights into glucosyltransferase activity and product release.
Febs J., 279, 2012
4PRE
DownloadVisualize
BU of 4pre by Molmil
Crystal structure of a HLA-B*35:08-HPVG-Q5
分子名称: Beta-2-microglobulin, Epstein-Barr nuclear antigen 1, MHC class I antigen
著者Yu Chih, L, Rossjohn, J, Gras, S.
登録日2014-03-05
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Molecular Basis for the Interplay between T Cells, Viral Mutants, and Human Leukocyte Antigen Micropolymorphism.
J.Biol.Chem., 289, 2014
3VAQ
DownloadVisualize
BU of 3vaq by Molmil
Adenosine kinase from Schistosoma mansoni in complex with adenosine
分子名称: ADENOSINE, CHLORIDE ION, Putative adenosine kinase
著者Romanello, L, Bachega, F.R, Garatt, R.C, DeMarco, R, Pereira, H.M.
登録日2011-12-29
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Adenosine kinase from Schistosoma mansoni: structural basis for the differential incorporation of nucleoside analogues.
Acta Crystallogr.,Sect.D, 69, 2013
4DNK
DownloadVisualize
BU of 4dnk by Molmil
Crystal structure of a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB) from homo sapiens at 2.20 A resolution.
分子名称: 1,2-ETHANEDIOL, 14-3-3 protein beta/alpha, PHOSPHATE ION
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
登録日2012-02-08
公開日2012-02-22
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAQ) from Homo sapiens at 2.20 A resolution
To be published
4DIY
DownloadVisualize
BU of 4diy by Molmil
Thaumatin I by Classical Hanging Drop Method at 1.98A resolution for Unique Water Distribution
分子名称: Thaumatin I
著者Pechkova, E, Sivozhelezov, V, Belmonte, L, Nicolini, C.
登録日2012-02-01
公開日2012-07-18
最終更新日2012-10-31
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Unique water distribution of Langmuir-Blodgett versus classical crystals.
J.Struct.Biol., 180, 2012
3VFT
DownloadVisualize
BU of 3vft by Molmil
crystal structure of HLA B*3508LPEP-P6Ala, peptide mutant P6-ala
分子名称: Beta-2-microglobulin, LPEP peptide from EBV, P6A, ...
著者Liu, Y.C, Rossjohn, J, Gras, S.
登録日2012-01-10
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
4KE6
DownloadVisualize
BU of 4ke6 by Molmil
Crystal structure D196N mutant of Monoglyceride lipase from Bacillus sp. H257 in complex with 1-rac-lauroyl glycerol
分子名称: (2R)-2,3-dihydroxypropyl dodecanoate, (4S)-2-METHYL-2,4-PENTANEDIOL, Thermostable monoacylglycerol lipase
著者Rengachari, S, Aschauer, P, Gruber, K, Dreveny, I, Oberer, M.
登録日2013-04-25
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformational plasticity and ligand binding of bacterial monoacylglycerol lipase.
J.Biol.Chem., 288, 2013
4DLD
DownloadVisualize
BU of 4dld by Molmil
Crystal structure of the GluK1 ligand-binding domain (S1S2) in complex with the antagonist (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid at 2.0 A resolution
分子名称: (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid, CHLORIDE ION, GLYCEROL, ...
著者Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
登録日2012-02-06
公開日2012-10-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and pharmacological characterization of phenylalanine-based AMPA receptor antagonists at kainate receptors
Chemmedchem, 7, 2012
3VG3
DownloadVisualize
BU of 3vg3 by Molmil
Cadmium derivative of human LFABP
分子名称: CADMIUM ION, Fatty acid-binding protein, liver, ...
著者Sharma, A, Yogavel, M, Sharma, A.
登録日2011-08-03
公開日2012-06-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
4DMV
DownloadVisualize
BU of 4dmv by Molmil
Crystal structure of the GT domain of Clostridium difficile Toxin A
分子名称: Toxin A
著者Malito, E, D'Urzo, N, Bottomley, M.J, Biancucci, M, Maione, D, Scarselli, M, Martinelli, M.
登録日2012-02-08
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of Clostridium difficile toxin A glucosyltransferase domain bound to Mn2+ and UDP provides insights into glucosyltransferase activity and product release.
Febs J., 279, 2012
3VGD
DownloadVisualize
BU of 3vgd by Molmil
Ctystal structure of glycosyltrehalose trehalohydrolase (D252E)
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3QKB
DownloadVisualize
BU of 3qkb by Molmil
Crystal structure of a Protein with unknown function which belongs to Pfam DUF74 family (PEPE_0654) from Pediococcus pentosaceus ATCC 25745 at 2.73 A resolution
分子名称: Uncharacterized protein
著者Joint Center for Structural Genomics (JCSG)
登録日2011-01-31
公開日2011-02-23
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Crystal structure of a Protein with unknown function which belongs to Pfam DUF74 family (PEPE_0654) from Pediococcus pentosaceus ATCC 25745 at 2.73 A resolution
To be published
4K46
DownloadVisualize
BU of 4k46 by Molmil
Crystal Structure of Adenylate Kinase from Photobacterium profundum
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ...
著者Cho, Y.-J, Kerns, S.J, Kern, D.
登録日2013-04-12
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Alike but Different: Adenylate kinases from E. Coli, Aquifex, and P. profundum
To be Published
3VKT
DownloadVisualize
BU of 3vkt by Molmil
Assimilatory nitrite reductase (Nii3) - NH2OH complex from tobbaco leaf
分子名称: CHLORIDE ION, HYDROXYAMINE, IRON/SULFUR CLUSTER, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-11-20
公開日2012-04-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The reductive reaction mechanism of tobacco nitrite reductase derived from a combination of crystal structures and ultraviolet-visible microspectroscopy
Proteins, 80, 2012
4PRB
DownloadVisualize
BU of 4prb by Molmil
Crystal structure of a HLA-B*35:08-HPVG-A4
分子名称: ACETATE ION, Beta-2-microglobulin, Epstein-Barr nuclear antigen 1, ...
著者Yu Chih, L, Rossjohn, J, Gras, S.
登録日2014-03-05
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Molecular Basis for the Interplay between T Cells, Viral Mutants, and Human Leukocyte Antigen Micropolymorphism.
J.Biol.Chem., 289, 2014
3VNS
DownloadVisualize
BU of 3vns by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with D-valine and AMP from streptomyces
分子名称: ADENOSINE MONOPHOSPHATE, D-VALINE, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
to be published
3VO9
DownloadVisualize
BU of 3vo9 by Molmil
Staphylococcus aureus FtsZ apo-form (SeMet)
分子名称: Cell division protein FtsZ
著者Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2013-08-14
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
4K7D
DownloadVisualize
BU of 4k7d by Molmil
Crystal Structure of Parkin C-terminal RING domains
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, MALONATE ION, ...
著者Sauve, V, Trempe, J.-F, Menade, M, Gehring, K.
登録日2013-04-17
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of parkin reveals mechanisms for ubiquitin ligase activation.
Science, 340, 2013
4PTN
DownloadVisualize
BU of 4ptn by Molmil
Crystal Structure of YagE, a KDG aldolase protein in complex with Magnesium cation coordinated L-glyceraldehyde
分子名称: 1,2-ETHANEDIOL, GLYCEROL, L-glyceraldehyde, ...
著者Manoj Kumar, P, Baskar, V, Manicka, S, Krishnaswamy, S.
登録日2014-03-11
公開日2014-12-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of YagE, a putative DHDPS-like protein from Escherichia coli K12.
Proteins, 71, 2008
4PU9
DownloadVisualize
BU of 4pu9 by Molmil
E. coli GyrB 43-kDa N-terminal fragment in complex with ADP-BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, GyrB, ...
著者Stanger, F.V, Schirmer, T.
登録日2014-03-12
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
3VPN
DownloadVisualize
BU of 3vpn by Molmil
Crystal structure of human ribonucleotide reductase subunit M2 (hRRM2) mutant
分子名称: FE (III) ION, MAGNESIUM ION, Ribonucleoside-diphosphate reductase subunit M2
著者Chen, X, Xu, Z, Liu, H, Zhang, L, Chen, B, Zhu, L, Yang, C, Zhu, W, Shao, J.
登録日2012-03-05
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Essential role of E106 in the proton-coupled electron transfer in human
to be published

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon