PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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4M5W	Crystal structure of the USP7/HAUSP catalytic domain 分子名称: BROMIDE ION, Ubiquitin carboxyl-terminal hydrolase 7 著者 Molland, K.L, Mesecar, A.D, Zhou, Q. 登録日 2013-08-08 公開日 2014-03-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.244 Å) 主引用文献 A 2.2 angstrom resolution structure of the USP7 catalytic domain in a new space group elaborates upon structural rearrangements resulting from ubiquitin binding. Acta Crystallogr F Struct Biol Commun, 70, 2014
3ZEB	A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150 分子名称: 2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ... 著者 Vinothkumar, K.R, voskya, O, Kuettler, E.V, Brouwer, A.J, Liskamp, R.M.J, Verhelst, S.H.L. 登録日 2012-12-04 公開日 2013-02-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Activity-Based Probes for Rhomboid Proteases Discovered in a Mass Spectrometry-Based Assay. Proc.Natl.Acad.Sci.USA, 110, 2013
4KUO	A superfast recovering full-length LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae (Photoexcited state) 分子名称: RIBOFLAVIN, blue-light photoreceptor 著者 Circolone, F, Granzin, J, Stadler, A, Krauss, U, Drepper, T, Endres, S, Knieps-Gruenhagen, E, Wirtz, A, Willbold, D, Batra-Safferling, R, Jaeger, K.-E. 登録日 2013-05-22 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and function of a short LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae. BMC Microbiol, 15, 2015
1YTT	YB SUBSTITUTED SUBTILISIN FRAGMENT OF MANNOSE BINDING PROTEIN-A (SUB-MBP-A), MAD STRUCTURE AT 110K 分子名称: MANNOSE-BINDING PROTEIN A, YTTERBIUM (III) ION 著者 Burling, F.T, Weis, W.I, Flaherty, K.M, Brunger, A.T. 登録日 1995-11-09 公開日 1996-06-10 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Direct observation of protein solvation and discrete disorder with experimental crystallographic phases. Science, 271, 1996
1YAZ	AZIDE-BOUND YEAST CU(II)/ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE (298K) STRUCTURE 分子名称: AZIDE ION, COPPER (II) ION, PROTEIN (CU/ZN SUPEROXIDE DISMUTASE), ... 著者 Hart, P.J, Balbirnie, M.M, Ogihara, N.L, Nersissian, A.M, Weiss, M.S, Valentine, J.S, Eisenberg, D. 登録日 1998-12-23 公開日 2000-01-12 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A structure-based mechanism for copper-zinc superoxide dismutase. Biochemistry, 38, 1999
3FFP	X ray structure of the complex between carbonic anhydrase II and LC inhibitors 分子名称: 2-(1,3-thiazol-4-yl)-1H-benzimidazole-5-sulfonamide, BENZOIC ACID, Carbonic anhydrase 2, ... 著者 Temperini, C, Crocetti, L, Scozzafava, A, Supuran, C.T. 登録日 2008-12-04 公開日 2009-08-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 A thiabendazole sulfonamide shows potent inhibitory activity against mammalian and nematode alpha-carbonic anhydrases Bioorg.Med.Chem.Lett., 19, 2009
1XXT	The T-to-T High Transitions in Human Hemoglobin: wild-type deoxy Hb A (low salt, one test set) 分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE 著者 Kavanaugh, J.S, Rogers, P.H, Arnone, A. 登録日 2004-11-08 公開日 2004-12-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions. Biochemistry, 44, 2005
1JBD	NMR Structure of the Complex Between alpha-bungarotoxin and a Mimotope of the Nicotinic Acetylcholine Receptor 分子名称: LONG NEUROTOXIN 1, MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR 著者 Scarselli, M, Spiga, O, Ciutti, A, Bracci, L, Lelli, B, Lozzi, L, Calamandrei, D, Bernini, A, Di Maro, D, Klein, S, Niccolai, N. 登録日 2001-06-04 公開日 2001-06-27 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor. Biochemistry, 41, 2002
3ONS	Crystal structure of Human Ubiquitin in a new crystal form 分子名称: Ubiquitin 著者 Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L. 登録日 2010-08-30 公開日 2011-02-23 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch. Protein Sci., 20, 2011
4M5X	Crystal structure of the USP7/HAUSP catalytic domain 分子名称: BROMIDE ION, Ubiquitin carboxyl-terminal hydrolase 7 著者 Mesecar, A.D, Molland, K.L, Zhou, Q. 登録日 2013-08-08 公開日 2014-03-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.187 Å) 主引用文献 A 2.2 angstrom resolution structure of the USP7 catalytic domain in a new space group elaborates upon structural rearrangements resulting from ubiquitin binding. Acta Crystallogr F Struct Biol Commun, 70, 2014
1KID	GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 191-376, MUTANT WITH ALA 262 REPLACED WITH LEU AND ILE 267 REPLACED WITH MET 分子名称: GROEL (HSP60 CLASS) 著者 Buckle, A.M, Fersht, A.R. 登録日 1996-12-13 公開日 1997-09-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A structural model for GroEL-polypeptide recognition. Proc.Natl.Acad.Sci.USA, 94, 1997
3E0Q	Crystal structure of Schistosoma mansoni purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor 分子名称: 6-amino-5-bromo-1,2,3,4-tetrahydropyrimidine-2,4-dione, DIMETHYL SULFOXIDE, Purine-nucleoside phosphorylase 著者 Pereira, H.M, Berdini, V, Ferri, M.R, Cleasby, A, Garratt, R.C. 登録日 2008-07-31 公開日 2009-08-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of Schistosoma purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor. Acta Trop., 114, 2010
1DNO	A-DNA/RNA DODECAMER R(GCG)D(TATACGC) MG BINDING SITES 分子名称: DNA/RNA (5'-R(*GP*CP*GP)-D(*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION 著者 Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J. 登録日 1999-12-16 公開日 2000-04-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes. Nucleic Acids Res., 28, 2000
3FQM	Crystal structure of a novel dimeric form of HCV NS5A domain I protein 分子名称: GLYCEROL, Non-structural protein 5A, ZINC ION 著者 Love, R.A. 登録日 2009-01-07 公開日 2009-03-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a novel dimeric form of NS5A domain I protein from hepatitis C virus J.Virol., 83, 2009
1DNZ	A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITES 分子名称: DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3'), MAGNESIUM ION 著者 Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J. 登録日 1999-12-17 公開日 2000-04-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes. Nucleic Acids Res., 28, 2000
1DPL	A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE 分子名称: 5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3', MAGNESIUM ION, SPERMINE 著者 Egli, M, Tereshko, V, Teplova, M, Minasov, G, Joachimiak, A, Sanishvili, R, Weeks, C.M, Miller, R, Maier, M.A, An, H, Dan Cook, P, Manoharan, M. 登録日 1999-12-27 公開日 2000-04-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (0.83 Å) 主引用文献 X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution. Biopolymers, 48, 1998
1HOY	NMR STRUCTURE OF THE COMPLEX BETWEEN A-BUNGAROTOXIN AND A MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR 分子名称: LONG NEUROTOXIN 1, MIMOTOPE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR 著者 Scarselli, M, Spiga, O, Ciutti, A, Bracci, L, Lelli, B, Lozzi, L, Calamandrei, D, Bernini, A, Di Maro, D, Niccolai, N, Neri, P. 登録日 2000-12-12 公開日 2000-12-27 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor. Biochemistry, 41, 2002
3M7S	Crystal structure of the complex of xylanase GH-11 and alpha amylase inhibitor protein with cellobiose at 2.4 A resolution 分子名称: ACETATE ION, Haementhin, PHOSPHATE ION, ... 著者 Kumar, S, Dube, D, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P. 登録日 2010-03-17 公開日 2010-05-05 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure determination and inhibition studies of a novel xylanase and alpha-amylase inhibitor protein (XAIP) from Scadoxus multiflorus. Febs J., 277, 2010
1QLW	The Atomic Resolution Structure of a Novel Bacterial Esterase 分子名称: ESTERASE, SULFATE ION 著者 Bourne, P.C, Isupov, M.N, Littlechild, J.A. 登録日 1999-09-17 公開日 2000-02-10 最終更新日 2019-07-24 実験手法 X-RAY DIFFRACTION (1.09 Å) 主引用文献 The Atomic Resolution Structure of a Novel Bacterial Esterase Structure, 8, 2000
1HUL	A NOVEL DIMER CONFIGURATION REVEALED BY THE CRYSTAL STRUCTURE AT 2.4 ANGSTROMS RESOLUTION OF HUMAN INTERLEUKIN-5 分子名称: INTERLEUKIN-5 著者 Milburn, M.V. 登録日 1995-03-17 公開日 1995-12-07 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A novel dimer configuration revealed by the crystal structure at 2.4 A resolution of human interleukin-5. Nature, 363, 1993
4NJV	Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with ritonavir 分子名称: Protease, RITONAVIR 著者 Yedidi, R.S, Garimella, H, Chang, S.B, Kaufman, J.D, Das, D, Wingfield, P.T, Mitsuya, H. 登録日 2013-11-11 公開日 2014-04-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV. Antimicrob.Agents Chemother., 58, 2014
206D	BASE-PAIR OPENING AND SPERMINE BINDING-B-DNA FEATURES DISPLAYED IN THE CRYSTAL STRUCTURE OF A GAL OPERON FRAGMENT: IMPLICATIONS FOR PROTEIN-DNA RECOGNITION 分子名称: DNA (5'-D(*CP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*TP*GP*G)-3'), SPERMINE 著者 Tari, L.W, Secco, A.S. 登録日 1995-04-19 公開日 1996-06-21 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Base-pair opening and spermine binding--B-DNA features displayed in the crystal structure of a gal operon fragment: implications for protein-DNA recognition. Nucleic Acids Res., 23, 1995
1NCP	STRUCTURAL CHARACTERIZATION OF A 39 RESIDUE SYNTHETIC PEPTIDE CONTAINING THE TWO ZINC BINDING DOMAINS FROM THE HIV-1 P7 NUCLEOCAPSID PROTEIN BY CD AND NMR SPECTROSCOPY 分子名称: HIV-1 P7 NUCLEOCAPSID PROTEIN, ZINC ION 著者 Clore, G.M, Omichinski, J.G, Gronenborn, A.M. 登録日 1991-11-27 公開日 1993-10-31 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy. FEBS Lett., 292, 1991
4O60	Structure of ankyrin repeat protein 分子名称: ANK-N5C-317 著者 Ethayathulla, A.S, Guan, L. 登録日 2013-12-20 公開日 2015-03-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
1HBV	A CHECK ON RATIONAL DRUG DESIGN. CRYSTAL STRUCTURE OF A COMPLEX OF HIV-1 PROTEASE WITH A NOVEL GAMMA-TURN MIMETIC 分子名称: 2-[3-BENZYL-5-(1-ALANYL-AMINOETHYL)-2,3,6,7-TETRAHYDRO-1H-AZEPIN-1-YL]-1-OXOPROPYL-VALINYL-VALINE-METHYLESTER, HIV-1 PROTEASE 著者 Hoog, S, Abdel-Meguid, S. 登録日 1995-03-29 公開日 1995-07-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A check on rational drug design: crystal structure of a complex of human immunodeficiency virus type 1 protease with a novel gamma-turn mimetic inhibitor. J.Med.Chem., 38, 1995

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