Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2I0L
DownloadVisualize
BU of 2i0l by Molmil
X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6.
分子名称: Disks large homolog 1, peptide E6
著者Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
登録日2006-08-10
公開日2007-02-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
7A9Q
DownloadVisualize
BU of 7a9q by Molmil
Racemic compound of RNA duplexes.
分子名称: RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), ...
著者Rypniewski, W.
登録日2020-09-02
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.185 Å)
主引用文献Broken symmetry between RNA enantiomers in a crystal lattice.
Nucleic Acids Res., 49, 2021
6ZPF
DownloadVisualize
BU of 6zpf by Molmil
Racemic compound of RNA duplexes.
分子名称: RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), ...
著者Rypniewski, W.
登録日2020-07-08
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.442 Å)
主引用文献Broken symmetry between RNA enantiomers in a crystal lattice.
Nucleic Acids Res., 49, 2021
6S6U
DownloadVisualize
BU of 6s6u by Molmil
Structure of Azospirillum brasilense Glutamate Synthase in a6b4 oligomeric state.
分子名称: FE3-S4 CLUSTER, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Chaves-Sanjuan, A, Bolognesi, M.
登録日2019-07-03
公開日2019-09-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM Structures of Azospirillum brasilense Glutamate Synthase in Its Oligomeric Assemblies.
J.Mol.Biol., 431, 2019
6ZRL
DownloadVisualize
BU of 6zrl by Molmil
Racemic compound of RNA duplexes.
分子名称: RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), ...
著者Rypniewski, W.
登録日2020-07-13
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Broken symmetry between RNA enantiomers in a crystal lattice.
Nucleic Acids Res., 49, 2021
6ZY5
DownloadVisualize
BU of 6zy5 by Molmil
Cryo-EM structure of the Human topoisomerase II alpha DNA-binding/cleavage domain in State 1
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3'), ...
著者Vanden Broeck, A, Lamour, V.
登録日2020-07-30
公開日2021-05-26
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for allosteric regulation of Human Topoisomerase II alpha.
Nat Commun, 12, 2021
2BTJ
DownloadVisualize
BU of 2btj by Molmil
Fluorescent Protein EosFP - red form
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者Nar, H, Nienhaus, K, Wiedenmann, J, Nienhaus, G.U.
登録日2005-06-01
公開日2005-06-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Photo-Induced Protein Cleavage and Green-to-Red Conversion of Fluorescent Protein Eosfp.
Proc.Natl.Acad.Sci.USA, 102, 2005
5XJV
DownloadVisualize
BU of 5xjv by Molmil
Two intermediate states of conformation switch in dual specificity phosphatase 13a
分子名称: Dual specificity protein phosphatase 13 isoform A, PHOSPHATE ION
著者Wei, C.H, Min, H.G, Chun, H.J, Ryu, S.E.
登録日2017-05-04
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Two intermediate states of the conformational switch in dual specificity phosphatase 13a
Pharmacol. Res., 128, 2018
6ZWI
DownloadVisualize
BU of 6zwi by Molmil
Human butyrylcholinesterase in complex with ((6-((2E,4E)-5-(benzo[d][1,3]dioxol-5-yl)penta-2,4-dienamido)hexyl)triphenylphosphonium bromide)
分子名称: (2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Da Silva, O, Nachon, F, Dias, J, Brazzolotto, X.
登録日2020-07-28
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Fine-Tuning the Biological Profile of Multitarget Mitochondriotropic Antioxidants for Neurodegenerative Diseases.
Antioxidants (Basel), 10, 2021
4ZCD
DownloadVisualize
BU of 4zcd by Molmil
Renalase in complex with NAD+
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Silvaggi, N.R, Moran, G.R, Roman, J.V.
登録日2015-04-15
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6605 Å)
主引用文献Bacterial Renalase: Structure and Kinetics of an Enzyme with 2- and 6-Dihydro-beta-NAD(P) Oxidase Activity from Pseudomonas phaseolicola.
Biochemistry, 54, 2015
6RK2
DownloadVisualize
BU of 6rk2 by Molmil
Complex structure of virulence factor SghA mutant with its substrate SAG
分子名称: 2-(alpha-L-altropyranosyloxy)benzoic acid, Beta-glucosidase
著者Ye, F.Z, Wang, C, Chang, C.Q, Zhang, L.H, Gao, Y.G.
登録日2019-04-30
公開日2019-10-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.
Proc.Natl.Acad.Sci.USA, 116, 2019
6RKG
DownloadVisualize
BU of 6rkg by Molmil
1.32 A RESOLUTION OF SPOROSARCINA PASTEURII UREASE INHIBITED IN THE PRESENCE OF NBPTO AT pH 7.5
分子名称: 1,2-ETHANEDIOL, DIAMIDOPHOSPHATE, NICKEL (II) ION, ...
著者Mazzei, L, Cianci, M, Benini, S, Ciurli, S.
登録日2019-04-30
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献The Impact of pH on Catalytically Critical Protein Conformational Changes: The Case of the Urease, a Nickel Enzyme.
Chemistry, 25, 2019
6RKW
DownloadVisualize
BU of 6rkw by Molmil
CryoEM structure of the complete E. coli DNA Gyrase complex bound to a 130 bp DNA duplex
分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA (58-MER), DNA (62-MER), ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019
6S7F
DownloadVisualize
BU of 6s7f by Molmil
Human CD73 (5'-nucleotidase) in complex with PSB12379 (an AOPCP derivative) in the closed state
分子名称: 5'-nucleotidase, CALCIUM ION, N6-benzyl-(alpha,beta)-methylene-ADP, ...
著者Pippel, J, Strater, N.
登録日2019-07-04
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献X-Ray Co-Crystal Structure Guides the Way to Subnanomolar Competitive Ecto-5'-Nucleotidase (CD73) Inhibitors for Cancer Immunotherapy
Adv Ther, 2019
4ZFA
DownloadVisualize
BU of 4zfa by Molmil
Cytochrome P450 wild type from BM3 with bound PEG
分子名称: 1,2-ETHANEDIOL, Bifunctional P-450/NADPH-P450 reductase, NICKEL (II) ION, ...
著者Rogers, W.E, Othman, T, Heidary, D.K, Huxford, T.
登録日2015-04-21
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.765 Å)
主引用文献Effect of Mutation and Substrate Binding on the Stability of Cytochrome P450BM3 Variants.
Biochemistry, 55, 2016
4ZGX
DownloadVisualize
BU of 4zgx by Molmil
Structure of aldosterone synthase (CYP11B2) in complex with (+)-(R)-N-(4-(4-chloro-3-fluorophenyl)-5,6,7,8-tetrahydroisoquinolin-8-yl)propionamide
分子名称: Cytochrome P450 11B2, mitochondrial, N-[(8R)-4-(4-chloro-3-fluorophenyl)-5,6,7,8-tetrahydroisoquinolin-8-yl]propanamide, ...
著者Kuglstatter, A, Joseph, C.
登録日2015-04-24
公開日2015-10-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Discovery of 4-Aryl-5,6,7,8-tetrahydroisoquinolines as Potent, Selective, and Orally Active Aldosterone Synthase (CYP11B2) Inhibitors: In Vivo Evaluation in Rodents and Cynomolgus Monkeys.
J.Med.Chem., 58, 2015
2L9B
DownloadVisualize
BU of 2l9b by Molmil
Heterodimer between Rna14p monkeytail domain and Rna15p hinge domain of the yeast CF IA complex
分子名称: mRNA 3'-end-processing protein RNA14, mRNA 3'-end-processing protein RNA15
著者Moreno-Morcillo, M, Minvielle-Sebastia, L, Fribourg, S, Mackereth, C.D.
登録日2011-02-07
公開日2011-04-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Locked Tether Formation by Cooperative Folding of Rna14p Monkeytail and Rna15p Hinge Domains in the Yeast CF IA Complex.
Structure, 19, 2011
4ZIX
DownloadVisualize
BU of 4zix by Molmil
Structure of HEWL using Serial Femtosecond Crystallography of Soluble Proteins in Lipidic Cubic Phase
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Fromme, R, Ishchenko, A, Metz, M, Roy-Chowdhury, S, Basu, S, Boutet, S, Fromme, P, White, T.A, Barty, A, Spence, J.C.H, Weierstall, U, Liu, W, Cherezov, V.
登録日2015-04-28
公開日2015-08-12
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Serial Femtosecond Crystallography of Soluble Proteins in Lipidic Cubic Phase
IUCrJ, 2, 2015
6RHQ
DownloadVisualize
BU of 6rhq by Molmil
Crystal Structure of Two-Domain Laccase mutant I170A from Streptomyces griseoflavus
分子名称: COPPER (II) ION, GLYCEROL, SULFATE ION, ...
著者Gabdulkhakov, A.G, Tishchenko, T.V, Kolyadenko, I.A.
登録日2019-04-22
公開日2019-07-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
5XMG
DownloadVisualize
BU of 5xmg by Molmil
Crystal structure of PA3488 from Pseudomonas aeruginosa
分子名称: Uncharacterized protein
著者She, Z, Gao, Z.Q.
登録日2017-05-15
公開日2018-05-16
最終更新日2018-12-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and SAXS analysis of Tle5-Tli5 complex reveals a novel inhibition mechanism of H2-T6SS in Pseudomonas aeruginosa.
Protein Sci., 26, 2017
4ZO6
DownloadVisualize
BU of 4zo6 by Molmil
Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose
分子名称: GLYCEROL, Lin1840 protein, MAGNESIUM ION, ...
著者Nakajima, M, Yoshida, R, Miyanaga, A, Abe, K, Takahashi, Y, Sugimoto, N, Toyoizumi, H, Nakai, H, Kitaoka, M, Taguchi, H.
登録日2015-05-06
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua
Plos One, 11, 2016
6RTT
DownloadVisualize
BU of 6rtt by Molmil
Piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus complexed with picolinic acid
分子名称: GLYCEROL, PYRIDINE-2-CARBOXYLIC ACID, SULFATE ION, ...
著者Hasse, D, Huelsemann, J, Carlsson, G, Andersson, I.
登録日2019-05-26
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and mechanism of piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus.
Acta Crystallogr D Struct Biol, 75, 2019
2BXF
DownloadVisualize
BU of 2bxf by Molmil
Human serum albumin complexed with diazepam
分子名称: 7-CHLORO-1-METHYL-5-PHENYL-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, SERUM ALBUMIN
著者Ghuman, J, Zunszain, P.A, Petitpas, I, Bhattacharya, A.A, Curry, S.
登録日2005-07-26
公開日2005-09-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural Basis of the Drug-Binding Specificity of Human Serum Albumin.
J.Mol.Biol., 353, 2005
6RUA
DownloadVisualize
BU of 6rua by Molmil
Structure of recombinant human butyrylcholinesterase in complex with a coumarin-based fluorescent probe linked to sulfonamide type inhibitor.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Coquelle, N, Knez, D, Brus, B, Gobec, S, Colletier, J.P.
登録日2019-05-27
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Development of potent reversible selective inhibitors of butyrylcholinesterase as fluorescent probes.
J Enzyme Inhib Med Chem, 35, 2020
6RKS
DownloadVisualize
BU of 6rks by Molmil
E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 without TOPRIM insertion
分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon