PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

---

6M6C	CryoEM structure of Thermus thermophilus RNA polymerase elongation complex 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Shi, J, Wen, A, Feng, Y. 登録日 2020-03-14 公開日 2020-10-14 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of Mfd-dependent transcription termination. Nucleic Acids Res., 48, 2020
6X8Q	Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein PAPP peptide 分子名称: 1,2-ETHANEDIOL, 3D11 Fab heavy chain, 3D11 Fab light chain, ... 著者 Thai, E, Julien, J.P. 登録日 2020-06-01 公開日 2020-12-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11. Elife, 9, 2020
6X8U	Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein Mixed peptide 分子名称: 3D11 Fab heavy chain, 3D11 Fab light chain, GLYCEROL, ... 著者 Thai, E, Julien, J.P. 登録日 2020-06-01 公開日 2020-12-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11. Elife, 9, 2020
6XXS	Crystal structure of an NCoR1BBD2-BCL6BTB chimera in complex with the NcoR1 BBD1 corepressor peptide. 分子名称: B-cell lymphoma 6 protein, Nuclear receptor corepressor 1 著者 Zacharchenko, T, Wright, S.C. 登録日 2020-01-28 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Functionalization of the BCL6 BTB domain into a noncovalent crystallization chaperone. Iucrj, 8, 2021
6XYZ	Crystal structure of the GH18 chitinase ChiB from the chitin utilization locus of Flavobacterium johnsoniae 分子名称: 1,2-ETHANEDIOL, Candidate chitinase Glycoside hydrolase family 18, FORMIC ACID 著者 Mazurkewich, S, Helland, R, MacKenzie, A, Eijsink, V, Pope, P, Branden, G, Larsbrink, J. 登録日 2020-01-31 公開日 2020-09-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural insights of the enzymes from the chitin utilization locus of Flavobacterium johnsoniae. Sci Rep, 10, 2020
6X8P	Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein NPND peptide 分子名称: 1,2-ETHANEDIOL, 3D11 Fab heavy chain, 3D11 Fab light chain, ... 著者 Thai, E, Julien, J.P. 登録日 2020-06-01 公開日 2020-12-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11. Elife, 9, 2020
6XB3	Structure of AcNPV poxin in post-reactive state with Gp[2'-5']Ap[3'] 分子名称: 2',5'-GpAp, Poxin 著者 Eaglesham, J.B, McCarty, K.L, Kranzusch, P.J. 登録日 2020-06-05 公開日 2020-11-25 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of diverse poxin cGAMP nucleases reveal a widespread role for cGAS-STING evasion in host-pathogen conflict. Elife, 9, 2020
6XCH	Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with Leupeptin 分子名称: 3C-like proteinase, Leupeptin 著者 Kneller, D.W, Kovalevsky, A, Coates, L. 登録日 2020-06-08 公開日 2020-06-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Malleability of the SARS-CoV-2 3CL M pro Active-Site Cavity Facilitates Binding of Clinical Antivirals. Structure, 28, 2020
6XDC	Cryo-EM structure of SARS-CoV-2 ORF3a 分子名称: ORF3a protein 著者 Kern, D.M, Hoel, C.M, Brohawn, S.G. 登録日 2020-06-10 公開日 2020-06-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM structure of SARS-CoV-2 ORF3a in lipid nanodiscs. Nat.Struct.Mol.Biol., 28, 2021
6XOK	X-ray structure of the rhombohedral form of the lipase from Thermomyces lanuginosa at 1.3 A resolution 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-3-(octadecanoyloxy)propyl pentacosanoate, Lipase, ... 著者 McPherson, A. 登録日 2020-07-07 公開日 2020-10-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The crystal Structures of Thermomyces (Humicola) lanuginosa lipase in complex with enzymatic reactants Current Enzyme Inhibition, 16, 2020
6XQ9	Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 13 分子名称: 4-(3-hydroxyphenoxy)benzoic acid, 7-methyl-3-phenyl-1H-indole-2-carboxylic acid, ACETATE ION, ... 著者 Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J. 登録日 2020-07-09 公開日 2021-07-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors. Proteins, 89, 2021
5X72	The crystal Structure PDE delta in complex with (rac)-p9 分子名称: (2R)-2-(2-fluorophenyl)-3-phenyl-1,2-dihydroquinazolin-4-one, (2S)-2-(2-fluorophenyl)-3-phenyl-1,2-dihydroquinazolin-4-one, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta 著者 Jiang, Y, Zhuang, C, Chen, L, Wang, R, Wang, F, Sheng, C. 登録日 2017-02-23 公開日 2017-10-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural Biology-Inspired Discovery of Novel KRAS-PDE delta Inhibitors J. Med. Chem., 60, 2017
6X5V	Peptide-bound structure of Marinomonas primoryensis peptide-binding domain 分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ... 著者 Guo, S, Davies, P.L. 登録日 2020-05-27 公開日 2021-09-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Molecular basis for a bacterial adhesins peptide-binding module To Be Published
6X5W	Peptide-bound structure of Marinomonas primoryensis peptide-binding domain 分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ... 著者 Guo, S, Davies, P.L. 登録日 2020-05-27 公開日 2021-09-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular basis for a bacterial adhesins peptide-binding module To Be Published
6X6Q	Peptide-bound structure of Marinomonas primoryensis peptide-binding domain 分子名称: ASP-SER-ASP, Antifreeze protein, CALCIUM ION, ... 著者 Guo, S, Davies, P.L. 登録日 2020-05-28 公開日 2021-09-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Molecular basis for a bacterial adhesins peptide-binding module To Be Published
6X6M	Peptide-bound structure of Marinomonas primoryensis peptide-binding domain 分子名称: Antifreeze protein, CALCIUM ION, PENTAETHYLENE GLYCOL, ... 著者 Guo, S, Davies, P.L. 登録日 2020-05-28 公開日 2021-09-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular basis for a bacterial adhesins peptide-binding module To Be Published
6MG8	Structural basis for cholesterol transport-like activity of the Hedgehog receptor Patched 分子名称: CHOLESTEROL, Protein patched homolog 1 著者 Zhang, Y, Bulkley, D, Xin, Y, Roberts, K.J, Asarnow, D.E, Sharma, A, Myers, B.R, Cho, W, Cheng, Y, Beachy, P.A. 登録日 2018-09-13 公開日 2018-11-28 最終更新日 2022-03-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Basis for Cholesterol Transport-like Activity of the Hedgehog Receptor Patched. Cell, 175, 2018
6XQR	OXA-48 bound by Compound 2.2 分子名称: Beta-lactamase, CHLORIDE ION, [1,1'-biphenyl]-4,4'-disulfonic acid 著者 Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T. 登録日 2020-07-10 公開日 2021-12-15 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48. Acs Infect Dis., 7, 2021
5XJ0	T. thermophilus RNA polymerase holoenzyme bound with gp39 and gp76 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Ooi, W.Y, Murayama, Y, Mekler, V, Minakhin, L, Severinov, K, Yokoyama, S, Sekine, S. 登録日 2017-04-28 公開日 2017-12-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.004 Å) 主引用文献 A Thermus phage protein inhibits host RNA polymerase by preventing template DNA strand loading during open promoter complex formation Nucleic Acids Res., 46, 2018
5XOG	RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... 著者 Ehara, H, Shirouzu, M, Sekine, S. 登録日 2017-05-28 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
5XRL	Galectin-10/Charcot-Leyden crystal protein variant N65A crystal structure 分子名称: GLYCEROL, Galectin-10 著者 Su, J. 登録日 2017-06-08 公開日 2018-01-24 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.004 Å) 主引用文献 Galectin-10: a new structural type of prototype galectin dimer and effects on saccharide ligand binding. Glycobiology, 28, 2018
6LTA	Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A) 分子名称: ACRYLIC ACID, Nonribosomal peptide synthetase 著者 Senda, T, Harada, A. 登録日 2020-01-22 公開日 2021-02-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation. Angew.Chem.Int.Ed.Engl., 60, 2021
6QS7	ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2A 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, MAGNESIUM ION, ... 著者 Deville, C, Saibil, H.R. 登録日 2019-02-20 公開日 2019-07-03 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor. Cell Rep, 27, 2019
6Y4B	Structure of cyclodipeptide synthase from Candidatus Glomeribacter gigasporarum bound to Phe-tRNAPhe 分子名称: Cyclodipeptide synthase, PHENYLALANINE, RNA (77-MER) 著者 Bourgeois, G, Mechulam, Y, Schmitt, E. 登録日 2020-02-20 公開日 2020-12-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (5 Å) 主引用文献 Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates. Rna, 26, 2020
5YBI	Structure of the bacterial pathogens ATPase with substrate AMPPNP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP synthase SpaL/MxiB, ... 著者 Mu, Z.X, Gao, X.P, Cui, S. 登録日 2017-09-05 公開日 2018-06-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.268 Å) 主引用文献 Structural Insight Into Conformational Changes Induced by ATP Binding in a Type III Secretion-Associated ATPase FromShigella flexneri. Front Microbiol, 9, 2018

<1069107010711072107310741075107610771078107910801081108210831084>