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8CXR
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Crystal structure of MraY bound to a sphaerimicin analogue
分子名称: (1S,4R,5S,6R,7S,9S,10S,11S,13S,14R)-9-[(2S,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]-14-(hexadecanoyloxy)-5,6,13-trihydroxy-8,16-dioxa-2,11-diazatricyclo[9.3.1.1~4,7~]hexadecane-10-carboxylic acid, MraYAA nanobody, Phospho-N-acetylmuramoyl-pentapeptide-transferase
著者Mashalidis, E.H, Lee, S.Y.
登録日2022-05-22
公開日2023-03-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Synthesis of macrocyclic nucleoside antibacterials and their interactions with MraY.
Nat Commun, 13, 2022
4ZWO
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Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F
分子名称: GLYCEROL, GLYCOLIC ACID, MANGANESE (II) ION, ...
著者Daczkowski, C.M, Pegan, S.D, Harvey, S.P.
登録日2015-05-19
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
Biochemistry, 54, 2015
4ZWP
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BU of 4zwp by Molmil
Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F
分子名称: BARIUM ION, GLYCEROL, MANGANESE (II) ION, ...
著者Daczkowski, C.M, Pegan, S.D, Harvey, S.P.
登録日2015-05-19
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
Biochemistry, 54, 2015
8XI2
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BU of 8xi2 by Molmil
Cryo-EM structure of the Chlamydomonas C* complex
分子名称: CWF21 domain-containing protein, Cdc5L, Crooked neck protein, ...
著者Lu, Y, Zhan, X.
登録日2023-12-19
公開日2024-10-09
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structure of a step II catalytically activated spliceosome from Chlamydomonas reinhardtii.
Embo J., 44, 2025
3BBB
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BU of 3bbb by Molmil
Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG)
分子名称: DNA (5'-D(*AP*G)-3'), Nucleoside diphosphate kinase B
著者Weichsel, A, Montfort, W.R.
登録日2007-11-09
公開日2008-09-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1.
Mol.Cancer Ther., 8, 2009
6SLO
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BU of 6slo by Molmil
Crystal structure of PUF60 UHM domain in complex with 7,8 dimethoxyperphenazine
分子名称: 2-[4-[3-(8-chloranyl-2,3-dimethoxy-phenothiazin-10-yl)propyl]piperazin-1-yl]ethanol, MAGNESIUM ION, Thioredoxin,Poly(U)-binding-splicing factor PUF60
著者Jagtap, P.K.A, Kubelka, T, Bach, T, Sattler, M.
登録日2019-08-20
公開日2020-09-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Identification of phenothiazine derivatives as UHM-binding inhibitors of early spliceosome assembly.
Nat Commun, 11, 2020
3TOH
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BU of 3toh by Molmil
HIV-1 Protease - Epoxydic Inhibitor Complex (pH 9 - Orthorombic Crystal form P212121)
分子名称: (S)-N-((2S,3S,4R,5R)-4-amino-3,5-dihydroxy-1,6-diphenylhexan-2-yl)-3-methyl-2-(2-phenoxyacetamido)butanamide, DIMETHYL SULFOXIDE, Gag-Pol polyprotein
著者Geremia, S, Olajuyigbe, F.M, Demitri, N.
登録日2011-09-05
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.116 Å)
主引用文献Developing HIV-1 Protease Inhibitors through Stereospecific Reactions in Protein Crystals.
Molecules, 21, 2016
3VM4
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BU of 3vm4 by Molmil
Cytochrome P450SP alpha (CYP152B1) in complex with (R)-ibuprophen
分子名称: (2R)-2-[4-(2-methylpropyl)phenyl]propanoic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Fatty acid alpha-hydroxylase, ...
著者Fujishiro, T, Shoji, O, Nagano, S, Sugimoto, H, Shiro, Y, Watanabe, Y.
登録日2011-12-08
公開日2012-05-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Chiral-substrate-assisted stereoselective epoxidation catalyzed by H2O2-dependent cytochrome P450SP alpha
Chem Asian J, 7, 2012
3BBF
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BU of 3bbf by Molmil
Crystal structure of the NM23-H2 transcription factor complex with GDP
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Weichsel, A, Montfort, W.R.
登録日2007-11-09
公開日2008-09-23
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1.
Mol.Cancer Ther., 8, 2009
7EIC
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BU of 7eic by Molmil
Crystal structure of AF9 YEATS domain in complex with H4K5acK8ac peptide
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Histone H4, ...
著者Kikuchi, M, Umehara, T.
登録日2021-03-30
公開日2022-04-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Elucidation of binding preferences of YEATS domains to site-specific acetylated nucleosome core particles.
J.Biol.Chem., 298, 2022
7EID
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BU of 7eid by Molmil
Crystal structure of AF9 YEATS domain in complex with H4K8acK12ac peptide
分子名称: GLYCEROL, Histone H4, Protein AF-9
著者Kikuchi, M, Umehara, T.
登録日2021-03-30
公開日2022-04-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Elucidation of binding preferences of YEATS domains to site-specific acetylated nucleosome core particles.
J.Biol.Chem., 298, 2022
7EIE
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BU of 7eie by Molmil
Crystal structure of YEATS2 YEATS domain
分子名称: GLYCEROL, YEATS domain-containing protein 2
著者Kikuchi, M, Umehara, T.
登録日2021-03-30
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Elucidation of binding preferences of YEATS domains to site-specific acetylated nucleosome core particles.
J.Biol.Chem., 298, 2022
1IY8
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BU of 1iy8 by Molmil
Crystal Structure of Levodione Reductase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, LEVODIONE REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Sogabe, S, Fukami, T, Shiratori, Y, Yoshizumi, A, Wada, M.
登録日2002-07-25
公開日2003-05-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure and Stereospecificity of Levodione Reductase from Corynebacterium aquaticum M-13
J.BIOL.CHEM., 278, 2003
1K5J
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BU of 1k5j by Molmil
The Crystal Structure of Nucleoplasmin-Core
分子名称: Nucleoplasmin Core
著者Dutta, S, Akey, I.V, Dingwall, C, Hartman, K.L, Laue, T, Nolte, R.T, Head, J.F, Akey, C.W.
登録日2001-10-10
公開日2001-11-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of nucleoplasmin-core: implications for histone binding and nucleosome assembly.
Mol.Cell, 8, 2001
6KOJ
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BU of 6koj by Molmil
Crystal structure of SNX11-PXe domain in complex with PI(3,5)P2
分子名称: Sorting nexin-11, [(2~{R})-2-butanoyloxy-3-[oxidanyl-[(2~{R},3~{R},5~{S},6~{R})-2,4,6-tris(oxidanyl)-3,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate
著者Xu, T, Liu, J.
登録日2019-08-11
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
6KOK
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Crystal Structure of SNX11/SNX10-PXe Chimera
分子名称: CHLORIDE ION, SODIUM ION, Sorting nexin-11,Uncharacterized protein SNX10
著者Xu, T, Liu, J.
登録日2019-08-11
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
6KOI
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BU of 6koi by Molmil
Crystal structure of SNX11-PXe domain in dimer form.
分子名称: Sorting nexin-11
著者Xu, T, Xu, J, Liu, J.
登録日2019-08-11
公開日2020-07-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
4R3U
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BU of 4r3u by Molmil
Crystal structure of 2-Hydroxyisobutyryl-CoA Mutase
分子名称: 2-hydroxyisobutyryl-CoA mutase large subunit, 2-hydroxyisobutyryl-CoA mutase small subunit, 3-HYDROXYBUTANOYL-COENZYME A, ...
著者Zahn, M, Kurteva-Yaneva, N, Rohwerder, T, Straeter, N.
登録日2014-08-18
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of the stereospecificity of bacterial B12-dependent 2-hydroxyisobutyryl-CoA mutase.
J.Biol.Chem., 290, 2015
3O8Z
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BU of 3o8z by Molmil
Crystal structure of Spn1 (Iws1) core domain
分子名称: SULFATE ION, Transcription factor IWS1
著者McDonald, S.M, Close, D, Hill, C.P.
登録日2010-08-03
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and biological importance of the spn1-spt6 interaction, and its regulatory role in nucleosome binding.
Mol.Cell, 40, 2010
1ZZE
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BU of 1zze by Molmil
X-ray Structure of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor
分子名称: Aldehyde reductase II, SULFATE ION
著者Kamitori, S, Iguchi, A, Ohtaki, A, Yamada, M, Kita, K.
登録日2005-06-14
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray Structures of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor Provide Insights into Stereoselective Reductions of Carbonyl Compounds
J.Mol.Biol., 352, 2005
3X1O
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BU of 3x1o by Molmil
Crystal structure of the ROQ domain of human Roquin
分子名称: IODIDE ION, Roquin-1
著者Ose, T, Verma, A, Cockburn, J.B, Berrow, N.S, Alderton, D, Stuart, D, Owens, R.J, Jones, E.Y.
登録日2014-11-26
公開日2015-03-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis
Nat Commun, 6, 2015
7SYC
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BU of 7syc by Molmil
Crystal Structure of Nucleoside triphosphate pyrophosphohydrolase from Klebsiella pneumoniae subsp. pneumoniae
分子名称: 7,8-dihydro-8-oxoguanine-triphosphatase, MAGNESIUM ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2021-11-24
公開日2021-12-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Nucleoside triphosphate pyrophosphohydrolase from Klebsiella pneumoniae subsp. pneumoniae
to be published
4DOL
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BU of 4dol by Molmil
Crystal structure of Arabidopsis thaliana fatty-acid binding protein At1g53520 (AtFAP3)
分子名称: At1g53520, PALMITIC ACID
著者Noel, J.P, Louie, G.V, Bowman, M.E.
登録日2012-02-09
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012
4DOI
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BU of 4doi by Molmil
Crystal structure of Arabidopsis thaliana chalcone isomerase At3g55120 (AtCHI)
分子名称: Chalcone--flavonone isomerase 1, NITRATE ION
著者Noel, J.P, Louie, G.V, Bowman, M.E.
登録日2012-02-09
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012
4DOO
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Crystal structure of Arabidopsis thaliana fatty-acid binding protein At3g63170 (AtFAP1)
分子名称: Chalcone-flavanone isomerase family protein, LAURIC ACID, POTASSIUM ION
著者Noel, J.P, Pojer, F, Louie, G.V, Bowman, M.E.
登録日2012-02-09
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012

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