PDB: 37819 件ウェブページステータス検索Chemie searchBIRD

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3D6Q	The RNase A- 5'-Deoxy-5'-N-piperidinouridine complex 分子名称: 1-(5-deoxy-5-piperidin-1-yl-alpha-L-arabinofuranosyl)pyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic 著者 Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-05-20 公開日 2009-02-10 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation. J.Med.Chem., 52, 2009
3D6P	RNase A- 5'-Deoxy-5'-N-morpholinouridine complex 分子名称: 1-(5-deoxy-5-morpholin-4-yl-alpha-L-arabinofuranosyl)pyrimidine-2,4(1H,3H)-dione, Ribonuclease pancreatic 著者 Leonidas, D.D, Zogrpahos, S.E, Oikonomakos, N.G. 登録日 2008-05-20 公開日 2009-02-10 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation. J.Med.Chem., 52, 2009
3T3H	Glycogen Phosphorylase b in complex with GlcIU 分子名称: 1-(beta-D-glucopyranosyl)-5-iodopyrimidine-2,4(1H,3H)-dione, Glycogen phosphorylase, muscle form 著者 Kantsadi, A.L, Skamnaki, V.T, Leonidas, D.D. 登録日 2011-07-25 公開日 2012-02-15 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The sigma-Hole Phenomenon of Halogen Atoms Forms the Structural Basis of the Strong Inhibitory Potency of C5 Halogen Substituted Glucopyranosyl Nucleosides towards Glycogen Phosphorylase  b Chemmedchem, 7, 2012
3D8Z	RNase A- 5'-Deoxy-5'-N-pyrrolidinothymidine complex 分子名称: 1-(2,5-dideoxy-5-pyrrolidin-1-yl-beta-L-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic 著者 Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-05-26 公開日 2009-02-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation J.Med.Chem., 52, 2009
3WQE	D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 complexed with D-allothreonine 分子名称: D-allothreonine, D-threo-3-hydroxyaspartate dehydratase, MAGNESIUM ION, ... 著者 Yasutake, Y, Matsumoto, Y, Wada, M. 登録日 2014-01-25 公開日 2015-01-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate Appl.Microbiol.Biotechnol., 99, 2015
3WQC	D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 分子名称: CHLORIDE ION, D-threo-3-hydroxyaspartate dehydratase, GLYCEROL, ... 著者 Yasutake, Y, Matsumoto, Y, Wada, M. 登録日 2014-01-25 公開日 2015-01-28 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate Appl.Microbiol.Biotechnol., 99, 2015
2ZUG	Crystal structure of WSSV ICP11 分子名称: ORF115 (WSSV285) (Wsv230) 著者 Wang, A.H.-J, Wang, H.-C, Ko, T.-P, Lo, C.-F. 登録日 2008-10-17 公開日 2008-12-09 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.72 Å) 主引用文献 White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly Proc.Natl.Acad.Sci.USA, 105, 2008
3WQD	D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 complexed with D-erythro-3-hydroxyaspartate 分子名称: (3S)-3-hydroxy-D-aspartic acid, D-threo-3-hydroxyaspartate dehydratase, MAGNESIUM ION, ... 著者 Yasutake, Y, Matsumoto, Y, Wada, M. 登録日 2014-01-25 公開日 2015-01-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate Appl.Microbiol.Biotechnol., 99, 2015
3WQF	D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 in the metal-free form 分子名称: D-threo-3-hydroxyaspartate dehydratase, PYRIDOXAL-5'-PHOSPHATE 著者 Yasutake, Y, Matsumoto, Y, Wada, M. 登録日 2014-01-25 公開日 2015-01-28 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate Appl.Microbiol.Biotechnol., 99, 2015
3WQG	D-threo-3-hydroxyaspartate dehydratase C353A mutant in the metal-free form 分子名称: D-threo-3-hydroxyaspartate dehydratase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE 著者 Yasutake, Y, Matsumoto, Y, Wada, M. 登録日 2014-01-25 公開日 2015-01-28 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate Appl.Microbiol.Biotechnol., 99, 2015
8G9A	Crystal structure of a resurrected ancestor (AncRNase) of the pancreatic-type RNases 2 and 3 sub-families 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, SULFATE ION, ... 著者 Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N. 登録日 2023-02-21 公開日 2024-02-28 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Ancestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases. J.Biol.Chem., 300, 2024
17RA	BRANCHPOINT HELIX FROM YEAST AND BINDING SITE FOR PHAGE GA/MS2 COAT PROTEINS, NMR, 12 STRUCTURES 分子名称: RNA 著者 Nikonowicz, E.P, Smith, J.S. 登録日 1998-08-04 公開日 1999-04-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 NMR structure and dynamics of an RNA motif common to the spliceosome branch-point helix and the RNA-binding site for phage GA coat protein. Biochemistry, 37, 1998
4OZW	Crystal Structure of the periplasmic alginate lyase AlgL H202A mutant 分子名称: Alginate lyase 著者 Howell, P.L, Wolfram, F, Robinson, H, Arora, K. 登録日 2014-02-19 公開日 2015-03-04 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 The Pseudomonas aeruginosa homeostasis enzyme AlgL clears the periplasmic space of accumulated alginate during polymer biosynthesis. J.Biol.Chem., 298, 2022
4J1Q	Crystal structure of a ketoreductase domain from the bacillaene assembly line 分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase PksJ 著者 Zheng, J, Keatinge-Clay, A.T. 登録日 2013-02-01 公開日 2014-03-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural and functional studies of a trans-acyltransferase polyketide assembly line enzyme that catalyzes stereoselective alpha- and beta-ketoreduction. Proteins, 82, 2014
4JDA	Complex structure of abscisic acid receptor PYL3 with (-)-ABA 分子名称: (2Z,4E)-5-[(1R)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL3 著者 Zhang, X, Wang, G, Chen, Z. 登録日 2013-02-24 公開日 2013-07-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural Insights into the Abscisic Acid Stereospecificity by the ABA Receptors PYR/PYL/RCAR Plos One, 8, 2013
6BJE	Crystal Structure of Lysophospholipase A2 Conjugated with Phenylmethylsulfonyl Fluoride 分子名称: Acyl-protein thioesterase 2, phenylmethanesulfonic acid 著者 Xu, S. 登録日 2017-11-06 公開日 2018-11-14 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Lysophospholipases cooperate to mediate lipid homeostasis and lysophospholipid signaling. J. Lipid Res., 60, 2019
4JDL	Crystal structure of native abscisic acid receptor PYL5 at 2.65 Angstrom 分子名称: Abscisic acid receptor PYL5, GLYCEROL 著者 Zhang, X, Zhang, Q, Chen, Z. 登録日 2013-02-25 公開日 2013-03-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural Insights into the Abscisic Acid Stereospecificity by the ABA Receptors PYR/PYL/RCAR Plos One, 8, 2013
4OZV	Crystal Structure of the periplasmic alginate lyase AlgL 分子名称: Alginate lyase, beta-D-mannopyranuronic acid 著者 Howell, P.L, Wolfram, F, Robinson, H, Arora, K. 登録日 2014-02-19 公開日 2015-03-04 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.642 Å) 主引用文献 The Pseudomonas aeruginosa homeostasis enzyme AlgL clears the periplasmic space of accumulated alginate during polymer biosynthesis. J.Biol.Chem., 298, 2022
4BY5	Crystal structure of Drosophila Frq2 分子名称: CALCIUM ION, FI18190P1, SODIUM ION 著者 Banos-Mateos, S, Chaves-Sanjuan, A, Sanchez-Barrena, M.J. 登録日 2013-07-17 公開日 2014-08-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 The Guanine-Exchange Factor Ric8A Binds the Calcium Sensor Ncs-1 to Regulate Synapse Number and Probability of Release. J.Cell.Sci., 127, 2014
4J1S	Crystal structure of a ketoreductase domain from the bacillaene assembly line 分子名称: Polyketide synthase PksJ 著者 Zheng, J, Keatinge-Clay, A.T. 登録日 2013-02-01 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structural and functional studies of a trans-acyltransferase polyketide assembly line enzyme that catalyzes stereoselective alpha- and beta-ketoreduction. Proteins, 82, 2014
4BY4	Crystal structure of Drosophila Frq2 分子名称: CALCIUM ION, FI18190P1, SODIUM ION 著者 Banos-Mateos, S, Chaves-Sanjuan, A, Sanchez-Barrena, M.J. 登録日 2013-07-17 公開日 2014-08-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Guanine-Exchange Factor Ric8A Binds to the Ca2+ Sensor Ncs-1 to Regulate Synapse Number and Neurotransmitter Release. J.Cell.Sci., 127, 2014
3ZIU	Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site 分子名称: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE 著者 Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T. 登録日 2013-01-10 公開日 2013-02-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens. Proc.Natl.Acad.Sci.USA, 110, 2013
4LGE	Crystal structure of clAP1 BIR3 bound to T3261256 分子名称: (4S,6aR,7aS)-5-{(2S)-2-cyclohexyl-2-[(N-methyl-L-alanyl)amino]acetyl}-N-[(4R)-3,4-dihydro-2H-chromen-4-yl]octahydro-1H-cyclopropa[4,5]pyrrolo[1,2-a]pyrazine-4-carboxamide, Baculoviral IAP repeat-containing protein 2, ZINC ION 著者 Dougan, D.R. 登録日 2013-06-27 公開日 2013-08-28 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Design, stereoselective synthesis, and biological evaluation of novel tri-cyclic compounds as inhibitor of apoptosis proteins (IAP) antagonists. Bioorg.Med.Chem., 21, 2013
4LJY	Crystal structure of RNA splicing effector Prp5 in complex with ADP 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Zhang, Z.-M, Li, J, Yang, F, Xu, Y, Zhou, J. 登録日 2013-07-05 公開日 2013-12-11 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of Prp5p reveals interdomain interactions that impact spliceosome assembly. Cell Rep, 5, 2013
4LGU	Crystal structure of clAP1 BIR3 bound to T3226692 分子名称: (3S,8aR)-N-((R)-chroman-4-yl)-2-((S)-2-cyclohexyl-2-((S)-2-(methylamino)propanamido)acetyl)octahydropyrrolo[1,2-a]pyrazine-3-carboxamide, Baculoviral IAP repeat-containing protein 2, ZINC ION 著者 Dougan, D.R, Mol, C.D, Snell, G.P. 登録日 2013-06-28 公開日 2013-08-28 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Design, stereoselective synthesis, and biological evaluation of novel tri-cyclic compounds as inhibitor of apoptosis proteins (IAP) antagonists. Bioorg.Med.Chem., 21, 2013

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