PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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7AGV	High-resolution structure of the K+/H+ antiporter subunit KhtT in complex with c-di-AMP 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ACETATE ION, CALCIUM ION, ... 著者 Cereija, T.B, Guerra, J.P, Morais-Cabral, J.H. 登録日 2020-09-23 公開日 2021-03-31 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7AHT	Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 7.5 分子名称: K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2020-09-25 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7AGW	Structure of the N-domain of the K+/H+ antiporter subunit KhtT at pH 6.5 分子名称: K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2020-09-23 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.511 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
7AHM	Low-resolution structure of the K+/H+ antiporter subunit KhtT in complex with c-di-AMP 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, K(+)/H(+) antiporter subunit KhtT 著者 Cereija, T.B, Guerra, J.P, Morais-Cabral, J.H. 登録日 2020-09-24 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.14 Å) 主引用文献 c-di-AMP, a likely master regulator of bacterial K + homeostasis machinery, activates a K + exporter. Proc.Natl.Acad.Sci.USA, 118, 2021
4RNN	Crystal structure of human polymerase eta inserting dGMPnPP opposite DNA template containing an abasic site 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA polymerase eta, GLYCEROL, ... 著者 Patra, A, Egli, M. 登録日 2014-10-24 公開日 2015-02-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.808 Å) 主引用文献 Structural and Kinetic Analysis of Nucleoside Triphosphate Incorporation Opposite an Abasic Site by Human Translesion DNA Polymerase eta. J.Biol.Chem., 290, 2015
4FT4	crystal structure of Zea mays ZMET2 in complex H3(1-32)K9me2 peptide and SAH 分子名称: DNA (cytosine-5)-methyltransferase 1, H3(1-32)K9me2 peptide, S-ADENOSYL-L-HOMOCYSTEINE 著者 Du, J, Patel, D.J. 登録日 2012-06-27 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants. Cell(Cambridge,Mass.), 151, 2012
4FO0	Human actin-related protein Arp8 in its ATP-bound state 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 8, CHLORIDE ION, ... 著者 Gerhold, C.B, Lakomek, K, Seifert, F.U, Hopfner, K.-P. 登録日 2012-06-20 公開日 2012-09-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of Actin-related protein 8 and its contribution to nucleosome binding. Nucleic Acids Res., 40, 2012
5TKP	Crystal structure of FBP aldolase from Toxoplasma gondii, equilibrium Schiff base FBP complex 分子名称: 1,6-di-O-phosphono-D-fructose, Fructose-bisphosphate aldolase 著者 Heron, P.W, Sygusch, J. 登録日 2016-10-07 公開日 2017-10-04 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 292, 2017
4FSX	crystal structure of Se-substituted Zea mays ZMET2 in complex with SAH 分子名称: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE 著者 Du, J, Patel, D.J. 登録日 2012-06-27 公開日 2012-10-17 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants. Cell(Cambridge,Mass.), 151, 2012
4FU6	Crystal structure of the PSIP1 PWWP domain 分子名称: GLYCEROL, PC4 and SFRS1-interacting protein, SULFATE ION, ... 著者 Qin, S, Tempel, W, Xu, C, Wu, H, Dong, A, Cerovina, T, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2012-06-28 公開日 2012-08-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and function of the nucleosome-binding PWWP domain. Trends Biochem.Sci., 39, 2014
5TJS	Crystal structure of FBP aldolase from Toxoplasma gondii, native form 分子名称: Fructose-bisphosphate aldolase, GLYCEROL 著者 Heron, P.W, Sygusch, J. 登録日 2016-10-05 公開日 2017-10-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 292, 2017
5TK3	Crystal structure of FBP aldolase from Toxoplasma gondii, burst-phase ternary complex 分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase, GLYCERALDEHYDE-3-PHOSPHATE, ... 著者 Heron, P.W, Sygusch, J. 登録日 2016-10-06 公開日 2017-10-04 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 292, 2017
5TKN	Crystal structure of FBP aldolase from Toxoplasma gondii, Schiff base FBP complex 分子名称: 1,6-di-O-phosphono-D-fructose, Fructose-bisphosphate aldolase 著者 Heron, P.W, Sygusch, J. 登録日 2016-10-07 公開日 2017-10-04 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 292, 2017
2BYM	Histone fold heterodimer of the Chromatin Accessibility Complex 分子名称: CADMIUM ION, CHRAC-14, CHRAC-16 著者 Fernandez-Tornero, C, Hartlepp, K.F, Grune, T, Eberharter, A, Becker, P.B, Muller, C.W. 登録日 2005-08-03 公開日 2005-11-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Histone Fold Subunits of Drosophila Chrac Facilitate Nucleosome Sliding Through Dynamic DNA Interactions. Mol.Cell.Biol., 25, 2005
4BWS	Crystal structure of the heterotrimer of PQBP1, U5-15kD and U5-52kD. 分子名称: CD2 ANTIGEN CYTOPLASMIC TAIL-BINDING PROTEIN 2, POLYGLUTAMINE-BINDING PROTEIN 1, THIOREDOXIN-LIKE PROTEIN 4A 著者 Mizuguchi, M, Obita, T, Serita, T, Kojima, R, Morimoto, T, Nabeshima, Y, Okazawa, H. 登録日 2013-07-04 公開日 2014-04-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mutations in the Pqbp1 Gene Prevent its Interaction with the Spliceosomal Protein U5-15Kd. Nat.Commun., 5, 2014
4RNM	Crystal structure of human polymerase eta inserting dAMPnPP opposite DNA template containing an abasic site 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA Primar: AGCGTCAT, DNA Template: CAT(3DR)ATGACGCT, ... 著者 Patra, A, Egli, M. 登録日 2014-10-24 公開日 2015-02-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.144 Å) 主引用文献 Structural and Kinetic Analysis of Nucleoside Triphosphate Incorporation Opposite an Abasic Site by Human Translesion DNA Polymerase eta. J.Biol.Chem., 290, 2015
5TKC	Crystal structure of FBP aldolase from Toxoplasma gondii, ternary complex 分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase, GLYCERALDEHYDE-3-PHOSPHATE, ... 著者 Heron, P.W, Sygusch, J. 登録日 2016-10-06 公開日 2017-10-04 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.779 Å) 主引用文献 Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 292, 2017
4FT2	crystal structure of Zea mays ZMET2 in complex H3(1-15)K9me2 peptide and SAH 分子名称: DNA (cytosine-5)-methyltransferase 1, H3 peptide, S-ADENOSYL-L-HOMOCYSTEINE 著者 Du, J, Patel, D.J. 登録日 2012-06-27 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants. Cell(Cambridge,Mass.), 151, 2012
5TJD	Computer-based rational design of improved functionality for antibody catalysts toward organophosphorus compounds 分子名称: FAB A.17 L47K mutant HEAVY CHAIN, FAB A.17 L47K mutant Light Chain 著者 Chatziefthimiou, S, Stepanova, A, Smirnov, I, Gabibov, A, Wilmanns, M. 登録日 2016-10-04 公開日 2018-05-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers. Proc.Natl.Acad.Sci.USA, 2020
7EG6	Snf5 Finger Helix bound to the nucleosome 分子名称: DNA (235-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P. 登録日 2021-03-24 公開日 2022-01-12 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity. Cell Discov, 7, 2021
4EO5	Yeast Asf1 bound to H3/H4G94P mutant 分子名称: ACETATE ION, GLYCEROL, Histone H3.2, ... 著者 Scorgie, J.K, Churchill, M.E. 登録日 2012-04-13 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability. Epigenetics Chromatin, 5, 2012
2BYK	Histone fold heterodimer of the Chromatin Accessibility Complex 分子名称: CHRAC-14, CHRAC-16, SULFATE ION 著者 Fernandez-Tornero, C, Hartlepp, K.F, Grune, T, Eberharter, A, Becker, P.B, Muller, C.W. 登録日 2005-08-03 公開日 2005-11-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Histone Fold Subunits of Drosophila Chrac Facilitate Nucleosome Sliding Through Dynamic DNA Interactions. Mol.Cell.Biol., 25, 2005
3RPG	Bmi1/Ring1b-UbcH5c complex structure 分子名称: E3 ubiquitin-protein ligase RING2, Polycomb complex protein BMI-1, Ubiquitin-conjugating enzyme E2 D3, ... 著者 Bentley, M.L, Dong, K.C, Cochran, A.G. 登録日 2011-04-26 公開日 2011-08-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.6485 Å) 主引用文献 Recognition of UbcH5c and the nucleosome by the Bmi1/Ring1b ubiquitin ligase complex. Embo J., 30, 2011
4RNO	Crystal structure of human polymerase eta extending an abasic site-dA pair by inserting dCTP opposite template G 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase eta, ... 著者 Patra, A, Egli, M. 登録日 2014-10-24 公開日 2015-02-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Structural and Kinetic Analysis of Nucleoside Triphosphate Incorporation Opposite an Abasic Site by Human Translesion DNA Polymerase eta. J.Biol.Chem., 290, 2015
4BWQ	Crystal structure of U5-15kD in a complex with PQBP1 分子名称: POLYGLUTAMINE-BINDING PROTEIN 1, THIOREDOXIN-LIKE PROTEIN 4A 著者 Mizuguchi, M, Obita, T, Serita, T, Kojima, R, Morimoto, T, Nabeshima, Y, Okazawa, H. 登録日 2013-07-04 公開日 2014-04-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mutations in the Pqbp1 Gene Prevent its Interaction with the Spliceosomal Protein U5-15Kd. Nat.Commun., 5, 2014

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