PDB: 2682 件ウェブページステータス検索Chemie searchBIRD

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6XU7	Drosophila melanogaster Testis polysome ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2022-12-21 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022
8HKV	Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome 分子名称: 23s rRNA (2996-MER), 50S ribosomal protein L10e, 50S ribosomal protein L13, ... 著者 Wang, Y.H, Zhou, J. 登録日 2022-11-28 公開日 2023-08-16 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.94 Å) 主引用文献 Cryo-electron microscopy structure and translocation mechanism of the crenarchaeal ribosome. Nucleic Acids Res., 51, 2023
5MRF	Structure of the yeast mitochondrial ribosome - Class C 分子名称: 15S ribosomal RNA, 21S ribosomal RNA, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Desai, N, Brown, A, Amunts, A, Ramakrishnan, V. 登録日 2016-12-22 公開日 2017-02-15 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.97 Å) 主引用文献 The structure of the yeast mitochondrial ribosome. Science, 355, 2017
4V6X	Structure of the human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. 登録日 2013-02-27 公開日 2014-07-09 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
4V4X	Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons. 分子名称: 16S rRNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M. 登録日 2006-06-27 公開日 2014-07-09 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (5 Å) 主引用文献 Structural basis for messenger RNA movement on the ribosome. Nature, 444, 2006
1C04	IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI 分子名称: 23S RRNA FRAGMENT, RIBOSOMAL PROTEIN L11, RIBOSOMAL PROTEIN L14, ... 著者 Ban, N, Nissen, P, Capel, M, Moore, P.B, Steitz, T.A. 登録日 1999-07-14 公開日 1999-08-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (5 Å) 主引用文献 Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit. Nature, 400, 1999
5AA0	Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ... 著者 Kumar, V, Chen, Y, Ahmed, T, Tan, J, Ero, R, Bhushan, S, Gao, Y.-G. 登録日 2015-07-23 公開日 2015-10-14 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome. Proc.Natl.Acad.Sci.USA, 112, 2015
6XGF	Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-06-17 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
3J8G	Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit 分子名称: 23S rRNA, 50S ribosomal protein L1, 50S ribosomal protein L11, ... 著者 Zhang, X, Yan, K, Zhang, Y, Li, N, Ma, C, Li, Z, Zhang, Y, Feng, B, Liu, J, Sun, Y, Xu, Y, Lei, J, Gao, N. 登録日 2014-10-24 公開日 2014-11-26 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly Nucleic Acids Res., 2014
7DGQ	Activity optimized supercomplex state1 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. 登録日 2020-11-12 公開日 2022-05-18 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
7QV3	Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Filbeck, S, Pfeffer, S. 登録日 2022-01-19 公開日 2022-03-09 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (5.14 Å) 主引用文献 Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue. Nature, 603, 2022
7PAK	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
5LZB	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
8URI	Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Ebright, R.H. 登録日 2023-10-26 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
8UPR	Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Ebright, R.H. 登録日 2023-10-23 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
8UQM	Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Ebright, R.H. 登録日 2023-10-24 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
6I7O	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Cheng, J, Becker, T, Beckmann, R. 登録日 2018-11-16 公開日 2019-01-16 最終更新日 2019-03-13 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways. EMBO J., 38, 2019
5GPN	Architecture of mammalian respirasome 分子名称: Acyl carrier protein, COPPER (II) ION, Cytochrome b, ... 著者 Gu, J, Wu, M, Guo, R, Yang, M. 登録日 2016-08-03 公開日 2017-04-05 最終更新日 2017-04-12 実験手法 ELECTRON MICROSCOPY (5.4 Å) 主引用文献 The architecture of the mammalian respirasome. Nature, 537, 2016
4V4Y	Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M. 登録日 2006-06-27 公開日 2014-07-09 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (5.5 Å) 主引用文献 Structural basis for messenger RNA movement on the ribosome. Nature, 444, 2006
6ZJY	Respiratory complex I from Thermus thermophilus, NAD+ dataset, minor state 分子名称: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, NADH-quinone oxidoreductase subunit 1, ... 著者 Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A. 登録日 2020-06-29 公開日 2020-09-02 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Key role of quinone in the mechanism of respiratory complex I. Nat Commun, 11, 2020
4CSU	Cryo-EM structures of the 50S ribosome subunit bound with ObgE 分子名称: 23S RRNA, 50S RIBOSOMAL PROTEIN L1, 50S RIBOSOMAL PROTEIN L11, ... 著者 Feng, B, Mandava, C.S, Guo, Q, Wang, J, Cao, W, Li, N, Zhang, Y, Zhang, Y, Wang, Z, Wu, J, Sanyal, S, Lei, J, Gao, N. 登録日 2014-03-10 公開日 2014-06-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Structural and Functional Insights Into the Mode of Action of a Universally Conserved Obg Gtpase. Plos Biol., 12, 2014
4V42	Crystal structure of the ribosome at 5.5 A resolution. 分子名称: 30S 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Yusupov, M.M, Yusupova, G.Z, Baucom, A, Lieberman, K, Earnest, T.N, Cate, J.H.D, Noller, H.F. 登録日 2001-03-30 公開日 2014-07-09 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (5.5 Å) 主引用文献 Crystal structure of the ribosome at 5.5 A resolution Science, 292, 2001
8UPO	Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Ebright, R.H. 登録日 2023-10-23 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
4V8M	High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome 分子名称: 18S RRNA OF THE SMALL RIBOSOMAL SUBUNIT, 40S RIBOSOMAL PROTEIN S10, PUTATIVE, ... 著者 Hashem, Y, des Georges, A, Fu, J, Buss, S.N, Jossinet, F, Jobe, A, Zhang, Q, Liao, H.Y, Grassucci, R.A, Bajaj, C, Westhof, E, Madison-Antenucci, S, Frank, J. 登録日 2012-12-09 公開日 2014-07-09 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (5.57 Å) 主引用文献 High-Resolution Cryo-Electron Microscopy Structure of the Trypanosoma Brucei Ribosome. Nature, 494, 2013
5LDX	Structure of mammalian respiratory Complex I, class3. 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Vinothkumar, K.R, Zhu, J, Hirst, J. 登録日 2016-06-28 公開日 2016-09-14 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 Structure of mammalian respiratory complex I. Nature, 536, 2016

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