PDB: 2849 件ウェブページステータス検索Chemie searchBIRD

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6TMS	Crystal structure of a de novo designed hexameric helical-bundle protein 分子名称: SULFATE ION, a novel designed pore protein, affinity purification tag 著者 Xu, C, Pei, X.Y, Luisi, B.F, Baker, D. 登録日 2019-12-05 公開日 2020-04-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Computational design of transmembrane pores. Nature, 585, 2020
6TJ1	Crystal structure of a de novo designed hexameric helical-bundle protein 分子名称: De novo designed WSHC6, purification tag 著者 Xu, C, Pei, X.Y, Luisi, B.F, Baker, D. 登録日 2019-11-23 公開日 2020-04-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Computational design of transmembrane pores. Nature, 585, 2020
7T3N	R184Q/E191Q mutant of rat vesicular glutamate transporter 2 (VGLUT2) 分子名称: (1S,3R)-1-AMINOCYCLOPENTANE-1,3-DICARBOXYLIC ACID, (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Vesicular glutamate transporter 2 著者 Li, F, Stroud, R.M, Edwards, R.H. 登録日 2021-12-08 公開日 2022-12-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Substrate Recognition, Directional Flux, and Allostery in a Synaptic Vesicle Glutamate Transporter To Be Published
7T3O	Rat vesicular glutamate transporter 2 (VGLUT2) in low Cl condition 分子名称: Vesicular glutamate transporter 2 著者 Li, F, Stroud, R.M, Edwards, R.H. 登録日 2021-12-08 公開日 2022-12-14 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Substrate Recognition, Directional Flux, and Allostery in a Synaptic Vesicle Glutamate Transporter To Be Published
6M6Z	A de novo designed transmembrane nanopore, TMH4C4 分子名称: TMH4C4 著者 Lu, P, Xu, C, Reggiano, G, Xu, Q, DiMaio, F, Baker, D. 登録日 2020-03-16 公開日 2020-06-24 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (5.9 Å) 主引用文献 Computational design of transmembrane pores. Nature, 585, 2020
7YSV	GluK1-1a extracellular domain captured in SYM2081 bound desensitized state 分子名称: Glutamate receptor 著者 Dhingra, S, Kumar, J. 登録日 2022-08-13 公開日 2023-08-16 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.01 Å) 主引用文献 Functional Implications of the Exon 9 Splice Insert in GluK1 Kainate Receptors Elife, 2023
7YSJ	GluK1-1a in nanodisc captured in SYM2081 bound desensitized state 分子名称: Glutamate receptor 著者 Dhingra, S, Kumar, J. 登録日 2022-08-12 公開日 2023-08-16 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 Functional Implications of the Exon 9 Splice Insert in GluK1 Kainate Receptors Elife, 2023
6JR0	Crystal structure of the human nucleosome phased with 12 selenium atoms 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... 著者 Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W. 登録日 2019-04-02 公開日 2019-10-02 最終更新日 2019-10-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure determination of the nucleosome core particle by selenium SAD phasing. Acta Crystallogr D Struct Biol, 75, 2019
6JR1	Crystal structure of the human nucleosome phased with 16 selenium atoms 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... 著者 Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W. 登録日 2019-04-02 公開日 2019-10-02 最終更新日 2019-10-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure determination of the nucleosome core particle by selenium SAD phasing. Acta Crystallogr D Struct Biol, 75, 2019
4D1E	THE CRYSTAL STRUCTURE OF HUMAN MUSCLE ALPHA-ACTININ-2 分子名称: ALPHA-ACTININ-2 著者 Pinotsis, N, Salmazo, A, Sjoeblom, B, Gkougkoulia, E, Djinovic-Carugo, K. 登録日 2014-05-01 公開日 2014-12-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The Structure and Regulation of Human Muscle Alpha-Actinin Cell(Cambridge,Mass.), 159, 2014
3G76	Crystal structure of XIAP-BIR3 in complex with a bivalent compound 分子名称: 1,1'-{hexa-2,4-diyne-1,6-diylbis[oxy{(2S,3R)-2-[(N-methyl-L-alanyl)amino]-1-oxobutane-3,1-diyl}(2S)pyrrolidine-1,2-diylmethanediyl]}bis[5-(phenylsulfanyl)-1H-tetrazole], Baculoviral IAP repeat-containing protein 4, ZINC ION 著者 Cossu, F, Milani, M, Mastrangelo, E, Bolognesi, M. 登録日 2009-02-09 公開日 2009-05-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for bivalent smac-mimetics recognition in the IAP protein family J.Mol.Biol., 392, 2009
7N3N	CryoEM structure of human NKCC1 state Fu-I 分子名称: 5-(AMINOSULFONYL)-4-CHLORO-2-[(2-FURYLMETHYL)AMINO]BENZOIC ACID, Solute carrier family 12 member 2 著者 Moseng, M.A. 登録日 2021-06-01 公開日 2022-09-28 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.33 Å) 主引用文献 Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling. Sci Adv, 8, 2022
5OBX	Mycoplasma genitalium DnaK-NBD 分子名称: Chaperone protein DnaK, GLYCEROL, SULFATE ION, ... 著者 Adell, M, Calisto, B, Fita, I, Martinelli, L. 登録日 2017-06-29 公開日 2018-05-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone. Protein Sci., 27, 2018
5OBW	Mycoplasma genitalium DnaK-NBD in complex with ATP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, GLYCEROL, ... 著者 Adell, M, Calisto, B, Fita, I, Martinelli, L. 登録日 2017-06-29 公開日 2018-05-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone. Protein Sci., 27, 2018
5OBY	Mycoplasma genitalium DnaK-NBD in complex with AMP-PNP 分子名称: Chaperone protein DnaK, GLYCEROL, MAGNESIUM ION, ... 著者 Adell, M, Calisto, B, Fita, I, Martinelli, L. 登録日 2017-06-29 公開日 2018-05-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone. Protein Sci., 27, 2018
5EZ0	CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE PDZ BINDING MOTIF OF THE MITOGEN ACTIVATED PROTEIN KINASE P38GAMMA. 分子名称: Mitogen-activated protein kinase 12, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 4 著者 Maisonneuve, P, Vaney, M.C, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N. 登録日 2015-11-26 公開日 2016-06-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma. J.Biol.Chem., 291, 2016
2VAF	Crystal structure of Human Cardiac Calsequestrin 分子名称: CALSEQUESTRIN-2 著者 Kim, E, Youn, B, Kemper, L, Campbell, C, Milting, H, Varsanyi, M, Kang, C. 登録日 2007-08-31 公開日 2007-09-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Characterization of Human Cardiac Calsequestrin and its Deleterious Mutants. J.Mol.Biol., 373, 2007
1QPF	FK506 BINDING PROTEIN (12 KDA, HUMAN) COMPLEX WITH L-709,858 分子名称: C32-O-(1-ETHYL-INDOL-5-YL)ASCOMYCIN, PROTEIN (FK506-BINDING PROTEIN), heptyl beta-D-glucopyranoside 著者 Becker, J.W, Rotonda, J. 登録日 1999-05-24 公開日 1999-08-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 32-Indolyl ether derivatives of ascomycin: three-dimensional structures of complexes with FK506-binding protein. J.Med.Chem., 42, 1999
1QPL	FK506 BINDING PROTEIN (12 KDA, HUMAN) COMPLEX WITH L-707,587 分子名称: C32-O-(1-METHYL-INDOL-5-YL) 18-HYDROXY-ASCOMYCIN, PROTEIN (FK506-BINDING PROTEIN) 著者 Becker, J.W, Rotonda, J. 登録日 1999-05-25 公開日 1999-08-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 32-Indolyl ether derivatives of ascomycin: three-dimensional structures of complexes with FK506-binding protein. J.Med.Chem., 42, 1999
4W8L	Structure of GH10 from Paenibacillus barcinonensis 分子名称: CALCIUM ION, Endo-1,4-beta-xylanase C, GLYCEROL 著者 Sainz-Polo, M.A, Sanz-Aparicio, J. 登録日 2014-08-25 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Exploring Multimodularity in Plant Cell Wall Deconstruction: STRUCTURAL AND FUNCTIONAL ANALYSIS OF Xyn10C CONTAINING THE CBM22-1-CBM22-2 TANDEM. J.Biol.Chem., 290, 2015
4Y1H	Crystal structure of K33 linked tri-Ubiquitin 分子名称: 1,2-ETHANEDIOL, Ubiquitin-40S ribosomal protein S27a 著者 Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y. 登録日 2015-02-07 公開日 2015-03-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations. Biochem.J., 467, 2015
8DTY	Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions 分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION 著者 Iyer, K.A, Hu, Y, Murayama, T, Samso, M. 登録日 2022-07-26 公開日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions To Be Published
8DVV	Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions 分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ... 著者 Iyer, K.A, Hu, Y, Murayama, T, Samso, M. 登録日 2022-07-29 公開日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.68 Å) 主引用文献 Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions To Be Published
8DTZ	Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions 分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION 著者 Iyer, K.A, Hu, Y, Murayama, T, Samso, M. 登録日 2022-07-26 公開日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions To Be Published
6PNN	Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-(2-methoxyethyl)-N-methylsulfamoyl)phenyl)acetamide 分子名称: 2-chloro-N-{4-chloro-3-[(2-methoxyethyl)(methyl)sulfamoyl]phenyl}acetamide, Glutathione S-transferase omega-1, L(+)-TARTARIC ACID, ... 著者 Oakley, A.J. 登録日 2019-07-02 公開日 2019-07-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Development of Benzenesulfonamide Derivatives as Potent Glutathione Transferase Omega-1 Inhibitors. J.Med.Chem., 63, 2020

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