PDB: 909 件ウェブページステータス検索Chemie searchBIRD

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3EGN	C-terminal RNA Recognition Motif of the U11/U12 65K Protein 分子名称: RNA-binding protein 40 著者 Netter, C, Wahl, M.C. 登録日 2008-09-11 公開日 2009-06-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Functional stabilization of an RNA recognition motif by a noncanonical N-terminal expansion Rna, 15, 2009
3EX7	The crystal structure of EJC in its transition state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Eukaryotic initiation factor 4A-III, ... 著者 Andersen, G.R, Nielsen, K.H. 登録日 2008-10-16 公開日 2008-12-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.301 Å) 主引用文献 Mechanism of ATP turnover inhibition in the EJC Rna, 15, 2009
3FEY	Crystal structure of the CBC-importin alpha complex. 分子名称: Importin subunit alpha-2, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2 著者 Dias, S.M.G, Ambrosio, A.L.B, Cerione, R.A. 登録日 2008-12-01 公開日 2009-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The molecular basis for the regulation of the cap-binding complex by the importins. Nat.Struct.Mol.Biol., 16, 2009
3FEX	Crystal structure of the CBC-importin alpha complex. 分子名称: Importin subunit alpha-2, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2 著者 Dias, S.M.G, Ambrosio, A.L.B, Cerione, R.A. 登録日 2008-12-01 公開日 2009-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.549 Å) 主引用文献 The molecular basis for the regulation of the cap-binding complex by the importins. Nat.Struct.Mol.Biol., 16, 2009
2RQ4	Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1 分子名称: CUG-BP- and ETR-3-like factor 1 著者 Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2009-01-19 公開日 2009-08-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3 Nucleic Acids Res., 2009
3G8S	Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme 分子名称: GLMS RIBOZYME, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
3G8T	Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6P 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
3G96	Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
3G9C	Crystal structure of the product Bacillus anthracis glmS ribozyme 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-13 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
2KG1	Structure of the third qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA 分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F 著者 Allain, F.H.T, Dominguez, C. 登録日 2009-03-02 公開日 2010-06-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2KG0	Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA 分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F 著者 Allain, F.H.T, Dominguez, C. 登録日 2009-03-02 公開日 2010-06-09 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2KH9	Solution structure of yeast Prp24-RRM2 bound to a fragment of U6 RNA 分子名称: 5'-R(*AP*GP*AP*GP*AP*U)-3', U4/U6 snRNA-associated-splicing factor PRP24 著者 Martin-Tumasz, S.A, Butcher, S.E. 登録日 2009-03-27 公開日 2010-03-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and functional implications of a complex containing a segment of U6 RNA bound by a domain of Prp24. Rna, 16, 2010
2KHC	Bruno RRM3+ 分子名称: Testis-specific RNP-type RNA binding protein 著者 Lyon, A.M, Reveal, B.S, Macdonald, P.M, Hoffman, D.W. 登録日 2009-04-01 公開日 2009-12-22 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Bruno protein contains an expanded RNA recognition motif. Biochemistry, 48, 2009
2RQC	Solution Structure of RNA-binding domain 3 of CUGBP1 in complex with RNA (UG)3 分子名称: 5'-R(*UP*GP*UP*GP*UP*G)-3', CUG-BP- and ETR-3-like factor 1 著者 Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2009-04-09 公開日 2009-08-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3 Nucleic Acids Res., 37, 2009
3H2V	Human raver1 RRM1 domain in complex with human vinculin tail domain Vt 分子名称: Raver-1, Vinculin 著者 Lee, J.H, Rangarajan, E.S, Yogesha, S.D, Izard, T. 登録日 2009-04-14 公開日 2009-07-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Raver1 interactions with vinculin and RNA suggest a feed-forward pathway in directing mRNA to focal adhesions Structure, 17, 2009
3H2U	Human raver1 RRM1, RRM2, and RRM3 domains in complex with human vinculin tail domain Vt 分子名称: Raver-1, Vinculin 著者 Lee, J.H, Rangarajan, E.S, Yogesha, S.D, Izard, T. 登録日 2009-04-14 公開日 2009-07-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Raver1 interactions with vinculin and RNA suggest a feed-forward pathway in directing mRNA to focal adhesions Structure, 17, 2009
2KI2	Solution Structure of ss-DNA Binding Protein 12RNP2 Precursor, HP0827(O25501_HELPY) form Helicobacter pylori 分子名称: Ss-DNA binding protein 12RNP2 著者 Ma, C, Lee, J, Kim, J, Park, S, Kwon, A, Lee, B. 登録日 2009-04-20 公開日 2009-10-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR solution structure of HP0827 (O25501_HELPY) from Helicobacter pylori: model of the possible RNA-binding site J.Biochem., 146, 2009
3HHN	Crystal structure of class I ligase ribozyme self-ligation product, in complex with U1A RBD 分子名称: Class I ligase ribozyme, self-ligation product, MAGNESIUM ION, ... 著者 Shechner, D.M, Grant, R.A, Bagby, S.C, Bartel, D.P. 登録日 2009-05-15 公開日 2009-11-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.987 Å) 主引用文献 Crystal structure of the catalytic core of an RNA-polymerase ribozyme. Science, 326, 2009
3HI9	The x-ray crystal structure of the first RNA recognition motif (RRM1) of the AU-rich element (ARE) binding protein HuR at 2.0 angstrom resolution 分子名称: ELAV-like protein 1 著者 Benoit, R.M, Kallen, J. 登録日 2009-05-19 公開日 2010-03-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The X-ray Crystal Structure of the First RNA Recognition Motif and Site-Directed Mutagenesis Suggest a Possible HuR Redox Sensing Mechanism. J.Mol.Biol., 397, 2010
2KM8	Interdomain RRM packing contributes to RNA recognition in the rna15, hrp1, anchor RNA 3' processing ternary complex 分子名称: 5'-R(P*UP*AP*UP*AP*UP*AP*UP*AP*AP*UP*AP*AP*U)-3', Nuclear polyadenylated RNA-binding protein 4, mRNA 3'-end-processing protein RNA15 著者 Leeper, T.C, Varani, G. 登録日 2009-07-24 公開日 2010-07-28 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Novel Protein-Protein Contacts Facilitate mRNA 3'-Processing Signal Recognition by Rna15 and Hrp1. J.Mol.Biol., 401, 2010
3IIN	Plasticity of the kink turn structural motif 分子名称: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3'), DNA/RNA (5'-R(*CP*A)-D(P*T)-3'), Group I intron, ... 著者 Lipchock, S.V, Strobel, S.A, Antonioli, A.H, Cochrane, J.C. 登録日 2009-08-02 公開日 2010-03-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.18 Å) 主引用文献 Plasticity of the RNA kink turn structural motif. Rna, 16, 2010
2KN4	The structure of the RRM domain of SC35 分子名称: Immunoglobulin G-binding protein G,Serine/arginine-rich splicing factor 2 著者 Clayton, J.C, Goult, B.T, Lian, L.-Y. 登録日 2009-08-14 公開日 2010-08-18 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The structure and selectivity of the SR protein SRSF2 RRM domain with RNA Nucleic Acids Res., 2011
3IRW	Structure of a c-di-GMP riboswitch from V. cholerae 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ... 著者 Smith, K.D. 登録日 2009-08-24 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of ligand binding by a c-di-GMP riboswitch. Nat.Struct.Mol.Biol., 16, 2009
3IWN	Co-crystal structure of a bacterial c-di-GMP riboswitch 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), C-di-GMP riboswitch, U1 small nuclear ribonucleoprotein A 著者 Kulshina, N, Baird, N.J, Ferre-D'Amare, A.R. 登録日 2009-09-02 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch. Nat.Struct.Mol.Biol., 16, 2009
3K0J	Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module 分子名称: MAGNESIUM ION, RNA (87-MER), THIAMINE DIPHOSPHATE, ... 著者 Kulshina, N, Edwards, T.E, Ferre-D'Amare, A.R. 登録日 2009-09-24 公開日 2009-12-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Thermodynamic analysis of ligand binding and ligand binding-induced tertiary structure formation by the thiamine pyrophosphate riboswitch. Rna, 16, 2010

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