PDB: 45817 件ウェブページステータス検索Chemie searchBIRD

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6VAE	Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA 分子名称: DNA (29-MER), Fanconi anemia group D2 protein, Fanconi anemia, ... 著者 Pavletich, N.P. 登録日 2019-12-17 公開日 2020-03-18 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex. Nature, 580, 2020
8KGM	Structure of African swine fever virus topoisomerase II in complex with dsDNA 分子名称: DNA (38-MER), DNA topoisomerase 2 著者 Cong, J, Xin, Y, Li, X, Chen, Y. 登録日 2023-08-19 公開日 2024-04-03 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structural insights into the DNA topoisomerase II of the African swine fever virus. Nat Commun, 15, 2024
8KGQ	Structure of African swine fever virus topoisomerase II in complex with dsDNA 分子名称: DNA (38-MER), DNA topoisomerase 2 著者 Cong, J, Xin, Y, Li, X, Chen, Y. 登録日 2023-08-19 公開日 2024-04-03 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 Structural insights into the DNA topoisomerase II of the African swine fever virus. Nat Commun, 15, 2024
8KGN	Structure of African swine fever virus topoisomerase II in complex with dsDNA 分子名称: DNA (38-MER), DNA topoisomerase 2 著者 Cong, J, Xin, Y, Li, X, Chen, Y. 登録日 2023-08-19 公開日 2024-04-03 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (5.9 Å) 主引用文献 Structural insights into the DNA topoisomerase II of the African swine fever virus. Nat Commun, 15, 2024
6ASD	Zinc finger region of human TET1 in complex with CpG DNA 分子名称: DNA (5'-D(*GP*CP*CP*AP*CP*CP*GP*GP*TP*GP*GP*C)-3'), Methylcytosine dioxygenase TET1, UNKNOWN ATOM OR ION, ... 著者 Liu, K, Xu, C, Tempel, W, Walker, J.R, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2017-08-24 公開日 2017-10-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants. Structure, 26, 2018
1L8Q	CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION 著者 Erzberger, J.P, Pirruccello, M.M, Berger, J.M. 登録日 2002-03-21 公開日 2002-09-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation Embo J., 21, 2002
1D66	DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX 分子名称: CADMIUM ION, DNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*AP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*TP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3'), ... 著者 Marmorstein, R, Carey, M, Ptashne, M, Harrison, S.C. 登録日 1992-03-06 公開日 1992-03-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 DNA recognition by GAL4: structure of a protein-DNA complex. Nature, 356, 1992
8QHM	DNA mimic Foldamer with sticky ends 分子名称: DNA mimic Foldamer 著者 Deepak, D, Loos, M, Huc, I. 登録日 2023-09-08 公開日 2023-10-11 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Enhancing the Features of DNA Mimic Foldamers for Structural Investigations. Chemistry, 30, 2024
6CBS	DnaG Primase C-terminal domain complex with SSB C-terminal peptide 分子名称: ACETIC ACID, DNA primase, single-stranded DNA-binding protein chimera, ... 著者 Oakley, A.J, Lo, A.T.Y. 登録日 2018-02-05 公開日 2019-02-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 DnaG Primase C-terminal domain complex with SSB C-terminal peptide To be Published
6CBT	DnaG Primase C-terminal domain complex with SSB C-terminal peptide 分子名称: ACETIC ACID, DNA primase, single-stranded DNA-binding protein chimera, ... 著者 Oakley, A.J, Lo, A.T.Y. 登録日 2018-02-05 公開日 2019-02-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 DnaG Primase C-terminal domain complex with SSB C-terminal peptide To be Published
4P4P	Crystal structure of Leishmania infantum polymerase beta: Nick complex 分子名称: DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(P*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(P*GP*CP*CP*G)-3'), ... 著者 Mejia, E, Burak, M, Alonso, A, Larraga, V, Kunkel, T, Bebenek, K, Garcia-Diaz, M. 登録日 2014-03-12 公開日 2014-08-06 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.2973 Å) 主引用文献 Structures of the Leishmania infantum polymerase beta. DNA Repair (Amst.), 18, 2014
3GXV	Three-dimensional structure of N-terminal domain of DnaB Helicase from Helicobacter pylori and its interactions with primase 分子名称: Replicative DNA helicase 著者 Kashav, T, Nitharwal, R, Syed, A.A, Gabdoulkhakov, A, Saenger, W, Dhar, K.S, Gourinath, S. 登録日 2009-04-03 公開日 2010-01-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Three-dimensional structure of N-terminal domain of DnaB helicase and helicase-primase interactions in Helicobacter pylori Plos One, 4, 2009
5V3M	mouseZFP568-ZnF1-11 in complex with DNA 分子名称: DNA (28-MER), ZINC ION, Zinc finger protein 568 著者 Patel, A, Cheng, X. 登録日 2017-03-07 公開日 2018-03-07 最終更新日 2019-09-18 実験手法 X-RAY DIFFRACTION (2.091 Å) 主引用文献 DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins. Cell, 173, 2018
6GN4	tc-DNA/tc-DNA duplex 分子名称: Tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3'), Tc-DNA (5'-D(*(TCS)P*(TTK)P*(TCY)P*(TCY)P*(TCS)P*(TCJ)P*(TCJ)P*(TCS)P*(TCY)P*(TCS))-3') 著者 Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C. 登録日 2018-05-29 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance. Nucleic Acids Res., 47, 2019
3ULP	Plasmodium falciparum SSB complex with ssDNA 分子名称: DNA (35-MER), Single-strand binding protein 著者 Antony, E, Lohman, T.M, Korolev, S. 登録日 2011-11-11 公開日 2012-05-09 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Plasmodium falciparum SSB Tetramer Wraps Single-Stranded DNA with Similar Topology but Opposite Polarity to E. coli SSB. J.Mol.Biol., 420, 2012
7CIZ	Crystal structure of DNAJC9 HBD helix2 in complex with H3.3-H4 dimer and MCM2 HBD 分子名称: DNA replication licensing factor MCM2, DnaJ homolog subfamily C member 9, Histone H3.3, ... 著者 Bao, H, Huang, H. 登録日 2020-07-08 公開日 2021-04-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network. Mol.Cell, 81, 2021
6GPI	Tc-DNA/DNA duplex 分子名称: DNA (5'-D(*GP*TP*AP*AP*GP*CP*CP*GP*AP*G)-3'), tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3') 著者 Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C. 登録日 2018-06-05 公開日 2018-06-13 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance. Nucleic Acids Res., 47, 2019
2WP0	Crystal structure of a HobA-DnaA (domain I-II) complex from Helicobacter pylori. 分子名称: ACETATE ION, CHLORIDE ION, CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA, ... 著者 Natrajan, G, Noirot-Gros, M.-F, Zawilak-Pawlik, A, Kapp, U, Terradot, L. 登録日 2009-07-31 公開日 2009-11-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 The Structure of a Dnaa/Hoba Complex from Helicobacter Pylori Provides Insight Into Regulation of DNA Replication in Bacteria. Proc.Natl.Acad.Sci.USA, 106, 2009
8G0H	Human PARP1 deltaV687-E688 bound to UKTT5 (compound 10) and to a DNA double strand break. 分子名称: 2-(4-{[2-(1H-benzimidazol-2-yl)ethyl]carbamoyl}phenyl)-1H-benzimidazole-7-carboxamide, DNA (5'-D(*CP*GP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*CP*G)-3'), ... 著者 Rouleau-Turcotte, E, Pascal, J.M. 登録日 2023-01-31 公開日 2024-02-07 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Novel modifications of PARP inhibitor veliparib increase PARP1 binding to DNA breaks. Biochem.J., 481, 2024
7CJ0	Crystal structure of DNAJC9 HBD in complex with H3.3-H4 dimer and MCM2 HBD 分子名称: DNA replication licensing factor MCM2, DnaJ homolog subfamily C member 9, GLYCEROL, ... 著者 Bao, H, Huang, H. 登録日 2020-07-09 公開日 2021-04-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network. Mol.Cell, 81, 2021
6EMZ	Structure of the Tn1549 transposon Integrase (aa 82-397, R225K) in complex with circular intermediate DNA (CI5-DNA) 分子名称: DNA (44-MER), Int protein 著者 Rubio-Cosials, A, Barabas, O. 登録日 2017-10-04 公開日 2018-04-04 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance. Cell, 173, 2018
2HCB	Structure of AMPPCP-bound DnaA from Aquifex aeolicus 分子名称: Chromosomal replication initiator protein dnaA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER 著者 Erzberger, J.P, Mott, M.L, Berger, J.M. 登録日 2006-06-15 公開日 2006-07-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling. Nat.Struct.Mol.Biol., 13, 2006
2OFI	Crystal Structure of 3-methyladenine DNA Glycosylase I (TAG) bound to DNA/3mA 分子名称: 3-METHYL-3H-PURIN-6-YLAMINE, 3-methyladenine DNA glycosylase I, constitutive, ... 著者 Metz, A.H, Hollis, T, Eichman, B.F. 登録日 2007-01-03 公開日 2007-05-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 DNA damage recognition and repair by 3-methyladenine DNA glycosylase I (TAG). Embo J., 26, 2007
8RI5	Crystal structure of transplatin/B-DNA adduct obtained upon 48 h of soaking 分子名称: AMMONIA, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, ... 著者 Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A. 登録日 2023-12-18 公開日 2024-02-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.415 Å) 主引用文献 On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer. Dalton Trans, 53, 2024
1BD1	CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNA 分子名称: DNA (5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G)-3'), TRIETHYLAMMONIUM ION 著者 Heinemann, U. 登録日 1989-08-16 公開日 1990-01-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystallographic study of one turn of G/C-rich B-DNA. J.Mol.Biol., 210, 1989

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