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PDB: 39 件
2CWC
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Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
分子名称: ADP-ribosylglycohydrolase
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-18
公開日2005-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
To be Published
5ZQY
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Crystal structure of a poly(ADP-ribose) glycohydrolase
分子名称: MAGNESIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Wang, M, Yuan, Z, Ma, Y, Wang, J, Liu, X.
登録日2018-04-20
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.577 Å)
主引用文献Structure-function analyses reveal the mechanism of the ARH3-dependent hydrolysis of ADP-ribosylation.
J. Biol. Chem., 293, 2018
1T5J
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BU of 1t5j by Molmil
Crystal structure of ribosylglycohydrolase MJ1187 from Methanococcus jannaschii
分子名称: Hypothetical protein MJ1187, MAGNESIUM ION
著者Gogos, A, Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2004-05-04
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Hypothetical protein MJ1187 from Methanococcus jannaschii
To be Published
3G9D
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BU of 3g9d by Molmil
Crystal structure glycohydrolase
分子名称: Dinitrogenase reductase activating glucohydrolase, MAGNESIUM ION
著者Li, X.-D, Winkler, F.K.
登録日2009-02-13
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of Dinitrogenase Reductase-activating Glycohydrolase (DRAG) Reveals Conservation in the ADP-Ribosylhydrolase Fold and Specific Features in the ADP-Ribose-binding Pocket
J.Mol.Biol., 390, 2009
3HFW
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Crystal Structure of human ADP-ribosylhydrolase 1 (hARH1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Mueller-Dieckmann, C, Weiss, M.S, Mueller-Dieckmann, J, Koch-Nolte, F.
登録日2009-05-13
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal Structure of human ADP-ribosylhydrolase 1
To be Published
2YZW
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ADP-ribosylglycohydrolase-related protein complex
分子名称: ADP-ribosylglycohydrolase, GADOLINIUM ION
著者Ebihara, A, Manzoku, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献ADP-ribosylglycohydrolase-related protein complex
To be Published
2G4K
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BU of 2g4k by Molmil
Anomalous substructure of human ADP-ribosylhydrolase 3
分子名称: ADP-ribosylhydrolase 3, CHLORIDE ION, MAGNESIUM ION
著者Mueller-Dieckmann, C, Weiss, M.S.
登録日2006-02-22
公開日2007-02-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.
Acta Crystallogr.,Sect.D, 63, 2007
2YZV
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ADP-ribosylglycohydrolase-related protein complex
分子名称: ADP-ribosylglycohydrolase, MAGNESIUM ION
著者Ebihara, A, Manzoku, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献ADP-ribosylglycohydrolase-related protein complex
To be Published
2QTY
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Crystal Structure of mouse ADP-ribosylhydrolase 3 (mARH3)
分子名称: MAGNESIUM ION, Poly(ADP-ribose) glycohydrolase ARH3
著者Mueller-Dieckmann, C.
登録日2007-08-03
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of mouse ADP-ribosylhydrolase 3 (mARH3).
Acta Crystallogr.,Sect.F, 64, 2008
2WOC
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Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, CHLORIDE ION, FORMIC ACID, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
2FP0
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human ADP-ribosylhydrolase 3
分子名称: ADP-ribosylhydrolase like 2, MAGNESIUM ION
著者Mueller-Dieckmann, C, Weiss, M.S, Koch-Nolte, F.
登録日2006-01-15
公開日2006-10-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FOZ
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BU of 2foz by Molmil
human ADP-ribosylhydrolase 3
分子名称: ADP-ribosylhydrolase like 2, MAGNESIUM ION
著者Mueller-Dieckmann, C, Weiss, M.S, Koch-Nolte, F.
登録日2006-01-15
公開日2006-10-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation.
Proc.Natl.Acad.Sci.Usa, 103, 2006
7L9I
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BU of 7l9i by Molmil
Crystal structure of human ARH3-D314A bound to magnesium and ADP-ribose
分子名称: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
登録日2021-01-04
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
7L9F
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Crystal structure of human ARH3 bound to calcium and ADP-ribose
分子名称: CALCIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
登録日2021-01-04
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
7L9H
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Crystal structure of human ARH3-D77A bound to magnesium and ADP-ribose
分子名称: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
登録日2021-01-04
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
2WOD
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BU of 2wod by Molmil
Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP- ribsoyllysine
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, CHLORIDE ION, GLYCEROL, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-11
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WOE
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Crystal Structure of the D97N variant of dinitrogenase reductase- activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP-ribose
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
7AQM
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BU of 7aqm by Molmil
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with alpha-1''-O-methyl-ADP-ribose (meADPr)
分子名称: ADP-ribosylhydrolase like 2, Adenosine 5'-diphosphoric acid beta-[(3beta,4beta-dihydroxy-5beta-methoxytetrahydrofuran-2alpha-yl)methyl] estere, MAGNESIUM ION
著者Rack, J.G.M, Zorzini, V, Ahel, I.
登録日2020-10-22
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
7AKR
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Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with ADP-ribose dimer
分子名称: 1,2-ETHANEDIOL, ADP-ribose glycohydrolase ARH3, CHLORIDE ION, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
7AKS
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BU of 7aks by Molmil
Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with H2B-S7-mar peptide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADP-ribose glycohydrolase ARH3, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
7ARW
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BU of 7arw by Molmil
Structure of human ARH3 E41A bound to alpha-NAD+ and magnesium
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADP-ribose glycohydrolase ARH3, ...
著者Rack, J.G.M, Zorzini, V, Ahel, I.
登録日2020-10-26
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
6D3A
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BU of 6d3a by Molmil
Structure of human ARH3 D314E bound to ADP-ribose and magnesium
分子名称: MAGNESIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Pourfarjam, Y, Ventura, J, Kurinov, I, Kim, I.K.
登録日2018-04-15
公開日2018-06-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.60001016 Å)
主引用文献Structure of human ADP-ribosyl-acceptor hydrolase 3 bound to ADP-ribose reveals a conformational switch that enables specific substrate recognition.
J.Biol.Chem., 293, 2018
6D36
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Structure of human ARH3 bound to ADP-ribose and magnesium
分子名称: MAGNESIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Pourfarjam, Y, Ventura, J, Kurinov, I, Kim, I.K.
登録日2018-04-14
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of human ADP-ribosyl-acceptor hydrolase 3 bound to ADP-ribose reveals a conformational switch that enables specific substrate recognition.
J.Biol.Chem., 293, 2018
6G28
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Human [protein ADP-ribosylargenine] hydrolase ARH1 in complex with ADP-ribose
分子名称: CHLORIDE ION, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE, ...
著者Ariza, A.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献(ADP-ribosyl)hydrolases: Structural Basis for Differential Substrate Recognition and Inhibition.
Cell Chem Biol, 25, 2018
6HH5
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ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-HPM
分子名称: ADP-ribosylhydrolase like 2, Adenosine Diphosphate (Hydroxymethyl)pyrrolidine monoalcohol, GLYCEROL, ...
著者Ariza, A.
登録日2018-08-24
公開日2018-11-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献(ADP-ribosyl)hydrolases: Structural Basis for Differential Substrate Recognition and Inhibition.
Cell Chem Biol, 25, 2018

 

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