Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 140 件

1VS1
DownloadVisualize
BU of 1vs1 by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
分子名称: 3-deoxy-7-phosphoheptulonate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE
著者Shumilin, I.A, Zhou, L, Wu, J, Woodard, R.W, Bauerle, R, Kretsinger, R.H.
登録日2006-03-09
公開日2006-05-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
TO BE PUBLISHED
6MDY
DownloadVisualize
BU of 6mdy by Molmil
Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-09-05
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1
To Be Published
4LU0
DownloadVisualize
BU of 4lu0 by Molmil
Crystal structure of 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase from Pseudomonas aeruginosa.
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Asojo, O.A.
登録日2013-07-24
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of 2-keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase from Pseudomonas aeruginosa.
Acta Crystallogr.,Sect.F, 69, 2013
7REU
DownloadVisualize
BU of 7reu by Molmil
Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
分子名称: 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, CHLORIDE ION, GLYCEROL, ...
著者Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-13
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
To Be Published
1D9E
DownloadVisualize
BU of 1d9e by Molmil
STRUCTURE OF E. COLI KDO8P SYNTHASE
分子名称: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE, SULFATE ION
著者Radaev, S, Dastidar, P, Patel, M, Woodard, R.W, Gatti, D.L.
登録日1999-10-27
公開日2000-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase.
J.Biol.Chem., 275, 2000
2EF9
DownloadVisualize
BU of 2ef9 by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, ARABINOSE-5-PHOSPHATE, PHOSPHOENOLPYRUVATE
著者Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
登録日2007-02-22
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases
Biochemistry, 46, 2007
7YKC
DownloadVisualize
BU of 7ykc by Molmil
crystal structure of the Phenylalanine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (ARO3) from Saccharomyces cerevisiae
分子名称: 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
著者Liu, H, Luo, Y.
登録日2022-07-22
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Mechanistic investigation of a D to N mutation in DAHP synthase that dictates carbon flux into the shikimate pathway in yeast.
Commun Chem, 6, 2023
7RUD
DownloadVisualize
BU of 7rud by Molmil
DAHP synthase complex with trifluoropyruvate oxime
分子名称: (2Z)-3,3,3-trifluoro-2-(hydroxyimino)propanoic acid, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
著者Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
登録日2021-08-16
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
7RUE
DownloadVisualize
BU of 7rue by Molmil
DAHP synthase complexed with trifluoropyruvate semicarbazone
分子名称: (2E)-2-(2-carbamoylhydrazinylidene)-3,3,3-trifluoropropanoic acid, MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
著者Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
登録日2021-08-16
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
6U57
DownloadVisualize
BU of 6u57 by Molmil
KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Botha, S, Ros, A.
登録日2019-08-27
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Segmented flow generator for serial crystallography at the European X-ray free electron laser.
Nat Commun, 11, 2020
4C1K
DownloadVisualize
BU of 4c1k by Molmil
Crystal structure of pyrococcus furiosus 3-deoxy-D-arabino- heptulosonate 7-phosphate synthase
分子名称: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE, CADMIUM ION, CARBONATE ION, ...
著者Nazmi, A.R, Schofield, L.R, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
登録日2013-08-13
公開日2013-11-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Destabilization of the Homotetrameric Assembly of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from the Hyperthermophile Pyrococcus Furiosus Enhances Enzymatic Activity
J.Mol.Biol., 426, 2014
6U8J
DownloadVisualize
BU of 6u8j by Molmil
Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, UNKNOWN ATOM OR ION
著者Michalska, K, Evdokimova, E, Semper, C, Di Leo, R, Stogios, P.J, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-09-05
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.492 Å)
主引用文献Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
To Be Published
4C1L
DownloadVisualize
BU of 4c1l by Molmil
Crystal structure of pyrococcus furiosus 3-deoxy-D-arabino- heptulosonate 7-phosphate synthase I181D interface mutant
分子名称: 2-dehydro-3-deoxyphosphoheptonate aldolase, CHLORIDE ION, MANGANESE (II) ION, ...
著者Nazmi, A.R, Schofield, L.R, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
登録日2013-08-13
公開日2013-11-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Destabilization of the homotetrameric assembly of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from the hyperthermophile Pyrococcus furiosus enhances enzymatic activity.
J. Mol. Biol., 426, 2014
6AGL
DownloadVisualize
BU of 6agl by Molmil
Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive
著者Cui, D, Qi, J, Wen, T.
登録日2018-08-13
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli.
J.Struct.Biol., 206, 2019
6AGM
DownloadVisualize
BU of 6agm by Molmil
Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive, TYROSINE
著者Cui, D, Qi, J, Wen, T.
登録日2018-08-13
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli.
J.Struct.Biol., 206, 2019
6BNG
DownloadVisualize
BU of 6bng by Molmil
Structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Acinetobacter baumannii
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, SULFATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-11-16
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Acinetobacter baumannii
to be published
4Z1A
DownloadVisualize
BU of 4z1a by Molmil
Structure of apo form KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1D
DownloadVisualize
BU of 4z1d by Molmil
Structure of PEP and zinc bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHOENOLPYRUVATE, ZINC ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1B
DownloadVisualize
BU of 4z1b by Molmil
Structure of H204A mutant KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1C
DownloadVisualize
BU of 4z1c by Molmil
Structure of Cadmium bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4UMC
DownloadVisualize
BU of 4umc by Molmil
Structural analysis of substrate-mimicking inhibitors in complex with Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase - the importance of accommodating the active site water
分子名称: L-PHOSPHOLACTATE, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Heyes, L.C, Reichau, S, Cross, P.J, Parker, E.J.
登録日2014-05-16
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water.
Bioorg.Chem., 57, 2014
4UCG
DownloadVisualize
BU of 4ucg by Molmil
NmeDAH7PS R126S variant
分子名称: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE, ...
著者Cross, P.J, Heyes, L.C, Zhang, S, Nazmi, A.R, Parker, E.J.
登録日2014-12-03
公開日2016-01-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Functional Unit of Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase is Dimeric.
Plos One, 11, 2016
4UC5
DownloadVisualize
BU of 4uc5 by Molmil
Neisseria Meningitidis DAH7PS-Phenylalanine regulated
分子名称: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, PHENYLALANINE, ...
著者Heyes, L.C, Lang, E.J.M, Parker, E.J.
登録日2014-12-03
公開日2015-11-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Calculated Pka Variations Expose Dynamic Allosteric Communication Networks.
J.Am.Chem.Soc., 138, 2016
4UMB
DownloadVisualize
BU of 4umb by Molmil
Structural analysis of substrate-mimicking inhibitors in complex with Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase - the importance of accommodating the active site water
分子名称: (2R)-2-(phosphonooxy)propanoic acid, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Heyes, L.C, Reichau, S, Cross, P.J, Parker, E.J.
登録日2014-05-16
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water.
Bioorg.Chem., 57, 2014
4UMA
DownloadVisualize
BU of 4uma by Molmil
Structural analysis of substrate-mimicking inhibitors in complex with Neisseria meningitidis 3 deoxy D arabino heptulosonate 7 phosphate synthase the importance of accommodating the active site water
分子名称: (E)-2-METHYL-3-PHOSPHONOACRYLATE, MANGANESE (II) ION, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Heyes, L.C, Reichau, S, Cross, P.J, Parker, E.J.
登録日2014-05-16
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water.
Bioorg.Chem., 57, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon