5DNM
| Nucleosome core particle containing adducts of ruthenium(II)-toluene PTA complex | 分子名称: | DNA (145-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Adhireksan, Z, Muhammad, R, Davey, C.A. | 登録日 | 2015-09-10 | 公開日 | 2016-09-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.81 Å) | 主引用文献 | Allosteric cross-talk in chromatin can mediate drug-drug synergy Nat Commun, 8, 2017
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4J8X
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7OHA
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8SIY
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3KUY
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8KD5
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class2 | 分子名称: | 187bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... | 著者 | Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Chang, X, Chao, W.C.H, He, J. | 登録日 | 2023-08-09 | 公開日 | 2023-09-13 | 最終更新日 | 2023-10-11 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
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8KD3
| Rpd3S in complex with nucleosome with H3K36MLA modification, H3K9Q mutation and 187bp DNA | 分子名称: | 187bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... | 著者 | Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J. | 登録日 | 2023-08-09 | 公開日 | 2023-09-13 | 最終更新日 | 2023-10-11 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
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7XNP
| Structure of nucleosome-AAG complex (A-55I, post-catalytic state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-29 | 公開日 | 2023-05-03 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFC
| Structure of nucleosome-DI complex (-30I, Apo state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFI
| Structure of nucleosome-DI complex (-50I, Apo state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFH
| Structure of nucleosome-AAG complex (A-30I, post-catalytic state) | 分子名称: | DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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1P3F
| Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants | 分子名称: | Histone H2A, Histone H2B, Histone H3, ... | 著者 | Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K. | 登録日 | 2003-04-17 | 公開日 | 2004-02-24 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 2004
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8V7L
| Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 2) | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Histone H2A type 1, Histone H2B, ... | 著者 | Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y. | 登録日 | 2023-12-04 | 公開日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking. Nat Commun, 15, 2024
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1P3M
| Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants | 分子名称: | Histone H2A, Histone H2B, Histone H3, ... | 著者 | Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K. | 登録日 | 2003-04-17 | 公開日 | 2004-02-24 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 2004
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7NKX
| RNA polymerase II-Spt4/5-nucleosome-Chd1 structure | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromatin elongation factor SPT4, ... | 著者 | Farnung, L, Ochmann, M, Engeholm, M, Cramer, P. | 登録日 | 2021-02-19 | 公開日 | 2021-08-25 | 最終更新日 | 2024-07-10 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural basis of nucleosome transcription mediated by Chd1 and FACT. Nat.Struct.Mol.Biol., 28, 2021
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1P3K
| Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants | 分子名称: | Histone H2A, Histone H2B, Histone H3, ... | 著者 | Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K. | 登録日 | 2003-04-17 | 公開日 | 2004-02-24 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 2004
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1ZLA
| X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core | 分子名称: | Histone H4, Palindromic 146bp Human alpha-Satellite DNA fragment, Xenopus laevis-like histone H2A, ... | 著者 | Chodaparambil, J.V, Barbera, A.J, Kaye, K.M, Luger, K. | 登録日 | 2005-05-05 | 公開日 | 2006-02-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA. Science, 311, 2006
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3MVD
| Crystal structure of the chromatin factor RCC1 in complex with the nucleosome core particle | 分子名称: | DNA (146-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Makde, R.D, England, J.R, Yennawar, H.P, Tan, S. | 登録日 | 2010-05-04 | 公開日 | 2010-08-25 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure of RCC1 chromatin factor bound to the nucleosome core particle. Nature, 467, 2010
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2F8N
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8KD4
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class1 | 分子名称: | 187bp DNA, Chromatin modification-related protein EAF3, Histone H2A, ... | 著者 | Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J. | 登録日 | 2023-08-09 | 公開日 | 2023-09-13 | 最終更新日 | 2023-10-11 | 実験手法 | ELECTRON MICROSCOPY (2.93 Å) | 主引用文献 | Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res., 33, 2023
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8G6G
| H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 5 | 分子名称: | 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Hicks, C.W, Wolberger, C, Keogh, M. | 登録日 | 2023-02-15 | 公開日 | 2024-02-21 | 最終更新日 | 2024-09-18 | 実験手法 | ELECTRON MICROSCOPY (2.93 Å) | 主引用文献 | Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch. Nucleic Acids Res., 52, 2024
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8EU2
| Class3 of the INO80-Hexasome complex | 分子名称: | DNA (110-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Wu, H, Munoz, E, Gourdet, M, Cheng, Y.F, Narlikar, G. | 登録日 | 2022-10-18 | 公開日 | 2023-07-12 | 最終更新日 | 2024-04-03 | 実験手法 | ELECTRON MICROSCOPY (2.93 Å) | 主引用文献 | Reorientation of INO80 on hexasomes reveals basis for mechanistic versatility. Science, 381, 2023
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6PA7
| The cryo-EM structure of the human DNMT3A2-DNMT3B3 complex bound to nucleosome. | 分子名称: | CHLORIDE ION, DNA (167-MER), DNA (cytosine-5)-methyltransferase 3A, ... | 著者 | Xu, T.H, Liu, M, Zhou, X.E, Liang, G, Zhao, G, Xu, H.E, Melcher, K, Jones, P.A. | 登録日 | 2019-06-11 | 公開日 | 2020-06-17 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (2.94 Å) | 主引用文献 | Structure of nucleosome-bound DNA methyltransferases DNMT3A and DNMT3B. Nature, 586, 2020
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8OF4
| Nucleosome Bound human SIRT6 (Composite) | 分子名称: | DNA (145-MER), Histone H2A type 1, Histone H2B, ... | 著者 | Smirnova, E, Bignon, E, Schultz, P, Papai, G, Ben-Shem, A. | 登録日 | 2023-03-13 | 公開日 | 2023-08-09 | 最終更新日 | 2024-03-13 | 実験手法 | ELECTRON MICROSCOPY (2.94 Å) | 主引用文献 | Binding to nucleosome poises human SIRT6 for histone H3 deacetylation. Elife, 12, 2024
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3LEL
| Structural Insight into the Sequence-Dependence of Nucleosome Positioning | 分子名称: | 147-MER DNA, Histone H2A, Histone H2B 1.1, ... | 著者 | Wu, B, Vasudevan, D, Davey, C.A. | 登録日 | 2010-01-15 | 公開日 | 2010-05-19 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Structural insight into the sequence dependence of nucleosome positioning Structure, 18, 2010
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