Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EW1
DownloadVisualize
BU of 8ew1 by Molmil
Structure of Bacple_01703-E145L
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Ulaganathan, T, Cygler, M.
Deposit date:2022-10-21
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
8EP4
DownloadVisualize
BU of 8ep4 by Molmil
Structure of Bacple_01703
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, CALCIUM ION, ...
Authors:Ulaganathan, T, Cygler, M.
Deposit date:2022-10-05
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
6M6P
DownloadVisualize
BU of 6m6p by Molmil
Structure of Marine bacterial laminarinase mutant E135A in complex with 1,3-beta-cellotriosyl-glucose
Descriptor: CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
Authors:Yang, J, Xu, Y, Tanokura, M, Long, L, Miyakawa, T.
Deposit date:2020-03-16
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
5WUT
DownloadVisualize
BU of 5wut by Molmil
Crystal structure of laminarinase from Flavobacterium sp. UMI-01
Descriptor: ULam111
Authors:Qin, H.M, Miyakawa, Y, Nakamura, A, Tanokura, M.
Deposit date:2016-12-21
Release date:2018-01-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of laminarinase from Flavobacterium sp. UMI-01
To Be Published
7KR6
DownloadVisualize
BU of 7kr6 by Molmil
Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G3G-2F-DNP
Descriptor: Glycoside hydrolase family 16 protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-2-deoxy-2-fluoro-alpha-D-glucopyranose
Authors:Tamura, K, Brumer, H, van Petegem, F.
Deposit date:2020-11-18
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Orthogonal Active-Site Labels for Mixed-Linkage endo-beta-Glucanases.
Acs Chem.Biol., 16, 2021
1ZM1
DownloadVisualize
BU of 1zm1 by Molmil
Crystal structures of complex F. succinogenes 1,3-1,4-beta-D-glucanase and beta-1,3-1,4-cellotriose
Descriptor: Beta-glucanase, CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:Tsai, L.C, Shyur, L.F, Cheng, Y.S, Lee, S.H.
Deposit date:2005-05-10
Release date:2006-05-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase in complex with beta-1,3-1,4-cellotriose
J.Mol.Biol., 354, 2005
2AYH
DownloadVisualize
BU of 2ayh by Molmil
CRYSTAL AND MOLECULAR STRUCTURE AT 1.6 ANGSTROMS RESOLUTION OF THE HYBRID BACILLUS ENDO-1,3-1,4-BETA-D-GLUCAN 4-GLUCANOHYDROLASE H(A16-M)
Descriptor: 1,3-1,4-BETA-D-GLUCAN 4-GLUCANOHYDROLASE, CALCIUM ION
Authors:Hahn, M, Keitel, T, Heinemann, U.
Deposit date:1995-02-02
Release date:1995-03-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal and molecular structure at 0.16-nm resolution of the hybrid Bacillus endo-1,3-1,4-beta-D-glucan 4-glucanohydrolase H(A16-M).
Eur.J.Biochem., 232, 1995
5SV8
DownloadVisualize
BU of 5sv8 by Molmil
Crystal Structure of the catalytic nucleophile and surface cysteine mutant of VvEG16 in complex with a xyloglucan oligosaccharide
Descriptor: alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, probable xyloglucan endotransglucosylase/hydrolase protein 19
Authors:McGregor, N.G.S, Tung, C.C, Van Petegem, F, Brumer, H.
Deposit date:2016-08-05
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.588 Å)
Cite:Crystallographic insight into the evolutionary origins of xyloglucan endotransglycosylases and endohydrolases.
Plant J., 89, 2017
3O5S
DownloadVisualize
BU of 3o5s by Molmil
Crystal Structure of the endo-beta-1,3-1,4 glucanase from Bacillus subtilis (strain 168)
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase, CALCIUM ION
Authors:Santos, C.R, Tonoli, C.C.C, Souza, A.R, Furtado, G.P, Ribeiro, L.F, Ward, R.J, Murakami, M.T.
Deposit date:2010-07-28
Release date:2011-07-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural characterization of a Beta-1,3 1,4-glucanase from Bacillus subtilis 168
PROCESS BIOCHEM, 46, 2011
2HYK
DownloadVisualize
BU of 2hyk by Molmil
The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96
Descriptor: Beta-1,3-glucanase, CALCIUM ION, ETHANOL, ...
Authors:Fibriansah, G, Nakamura, S, Kumasaka, T.
Deposit date:2006-08-07
Release date:2007-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3 A crystal structure of a novel endo-beta-1,3-glucanase of glycoside hydrolase family 16 from alkaliphilic Nocardiopsis sp. strain F96.
Proteins, 69, 2007
3WVJ
DownloadVisualize
BU of 3wvj by Molmil
The crystal structure of native glycosidic hydrolase
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase
Authors:Chen, C.C, Huang, J.W, Zhao, P, Ko, T.P, Huang, C.H, Chan, H.C, Huang, Z, Liu, W, Cheng, Y.S, Liu, J.R, Guo, R.T.
Deposit date:2014-05-22
Release date:2015-06-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analyses and yeast production of the beta-1,3-1,4-glucanase catalytic module encoded by the licB gene of Clostridium thermocellum.
Enzyme.Microb.Technol., 71, 2015
3RQ0
DownloadVisualize
BU of 3rq0 by Molmil
The crystal structure of a glycosyl hydrolases (GH) family protein 16 from Mycobacterium smegmatis str. MC2 155
Descriptor: 2,2',2''-NITRILOTRIETHANOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Tan, K, Chhor, G, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-27
Release date:2011-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The crystal structure of a glycosyl hydrolases (GH) family protein 16 from Mycobacterium smegmatis str. MC2 155
To be Published
1MAC
DownloadVisualize
BU of 1mac by Molmil
CRYSTAL STRUCTURE AND SITE-DIRECTED MUTAGENESIS OF BACILLUS MACERANS ENDO-1,3-1,4-BETA-GLUCANASE
Descriptor: 1,3-1,4-BETA-D-GLUCAN 4-GLUCANOHYDROLASE, CALCIUM ION
Authors:Hahn, M, Heinemann, U.
Deposit date:1994-12-22
Release date:1995-02-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and site-directed mutagenesis of Bacillus macerans endo-1,3-1,4-beta-glucanase.
J.Biol.Chem., 270, 1995
6IBU
DownloadVisualize
BU of 6ibu by Molmil
Apo Crh5 transglycosylase
Descriptor: GLYCEROL, Probable glycosidase crf1
Authors:Bartual, S.G, Fang, W, van Aalten, D.M.F.
Deposit date:2018-11-30
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.
Nat Commun, 10, 2019
5OCQ
DownloadVisualize
BU of 5ocq by Molmil
Crystal structure of the complex of the kappa-carrageenase from Pseudoalteromonas carrageenovora with an oligotetrasaccharide of kappa-carrageenan
Descriptor: 3,6-anhydro-D-galactose, 4-O-sulfo-beta-D-galactopyranose, CITRIC ACID, ...
Authors:Czjzek, M, Leroux, C, Bernard, T, Matard-Mann, M, Jeudy, A, Michel, G.
Deposit date:2017-07-03
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into marine carbohydrate degradation by family GH16 kappa-carrageenases.
J. Biol. Chem., 292, 2017
6T2R
DownloadVisualize
BU of 6t2r by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: Beta-glycosidase, SULFATE ION
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
1MVE
DownloadVisualize
BU of 1mve by Molmil
Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
Descriptor: CALCIUM ION, Truncated 1,3-1,4-beta-D-glucanase
Authors:Tsai, L.-C, Shyur, L.-F, Lee, S.-H, Lin, S.-S, Yuan, H.S.
Deposit date:2002-09-25
Release date:2003-07-15
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Natural Circularly Permuted Jellyroll Protein: 1,3-1,4-beta-D-Glucanase from Fibrobacter succinogenes.
J.Mol.Biol., 330, 2003
5OCR
DownloadVisualize
BU of 5ocr by Molmil
Crystal structure of the kappa-carrageenase zobellia_236 from Zobellia galactanivorans
Descriptor: GLYCEROL, Kappa-carrageenase, MAGNESIUM ION
Authors:Czjzek, M, Matard-Mann, M, Michel, G, Jeudy, A, Larocque, R.
Deposit date:2017-07-03
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural insights into marine carbohydrate degradation by family GH16 kappa-carrageenases.
J. Biol. Chem., 292, 2017
6T2N
DownloadVisualize
BU of 6t2n by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: CALCIUM ION, Glycoside hydrolase family 16 protein
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
6IBW
DownloadVisualize
BU of 6ibw by Molmil
Crh5 transglycosylase in complex with NAG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Probable glycosidase crf1
Authors:Fang, W, Bartual, S.G, van Aalten, D.M.F.
Deposit date:2018-12-01
Release date:2019-02-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.
Nat Commun, 10, 2019
1O4Z
DownloadVisualize
BU of 1o4z by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF BETA-AGARASE B FROM ZOBELLIA GALACTANIVORANS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, SODIUM ION, ...
Authors:Allouch, J, Jam, M, Helbert, W, Barbeyron, T, Kloareg, B, Henrissat, B, Czjzek, M.
Deposit date:2003-07-29
Release date:2003-12-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Three-dimensional Structures of Two {beta}-Agarases.
J.Biol.Chem., 278, 2003
4WZF
DownloadVisualize
BU of 4wzf by Molmil
Crystal structural basis for Rv0315, an immunostimulatory antigen and pseudo beta-1, 3-glucanase of Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 1,3-beta-glucanase, CALCIUM ION
Authors:Dong, W.Y, Fu, Z.F, Peng, G.Q.
Deposit date:2014-11-19
Release date:2015-12-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structural basis for Rv0315, an immunostimulatory antigen and inactive beta-1,3-glucanase of Mycobacterium tuberculosis.
Sci Rep, 5, 2015
4XXP
DownloadVisualize
BU of 4xxp by Molmil
Crystal Structure of an Uncharacterized Protein (Rv0315 ortholog) from Mycobacterium paratuberculosis
Descriptor: MAGNESIUM ION, Putative uncharacterized protein (Rv0315 ortholog)
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-01-30
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of an Uncharacterized Protein (Rv0315 ortholog) from Mycobacterium paratuberculosis
to be published
4XDQ
DownloadVisualize
BU of 4xdq by Molmil
Crystal structure of a Glycoside hydrolase family protein (Rv0315 ortholog) from Mycobacterium thermorestibile
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, CADMIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-12-19
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a Glycoside hydrolase family protein (Rv0315 ortholog) from Mycobacterium thermorestibile
To Be Published
1GLH
DownloadVisualize
BU of 1glh by Molmil
CATION BINDING TO A BACILLUS (1,3-1,4)-BETA-GLUCANASE. GEOMETRY, AFFINITY AND EFFECT ON PROTEIN STABILITY
Descriptor: 1,3-1,4-BETA-GLUCANASE, SODIUM ION
Authors:Keitel, T, Heinemann, U.
Deposit date:1994-11-25
Release date:1995-02-07
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cation binding to a Bacillus (1,3-1,4)-beta-glucanase. Geometry, affinity and effect on protein stability
Eur.J.Biochem., 222, 1994

 

1234>

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon