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8C5H
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BU of 8c5h by Molmil
NbSyt1 anti-(rat Synaptotagmin-1) nanobody bound to target cytosolic domain of Synaptotagmin-1
Descriptor: CALCIUM ION, GLYCEROL, NbSyt1 nanobody, ...
Authors:Martinez-Carranza, M, Stenmark, P.
Deposit date:2023-01-09
Release date:2023-08-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A Versatile Synaptotagmin-1 Nanobody Provides Perturbation-Free Live Synaptic Imaging And Low Linkage-Error in Super-Resolution Microscopy.
Small Methods, 7, 2023
2R83
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BU of 2r83 by Molmil
Crystal structure analysis of human synaptotagmin 1 C2A-C2B
Descriptor: CHLORIDE ION, Synaptotagmin-1
Authors:Sutton, R.B, Fuson, K.L, Montes, M, Robert, J.J.
Deposit date:2007-09-10
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of human synaptotagmin 1 C2AB in the absence of Ca2+ reveals a novel domain association.
Biochemistry, 46, 2007
4V11
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BU of 4v11 by Molmil
Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84
Descriptor: CALCIUM ION, GLYCEROL, SYNAPTIC VESICLE GLYCOPROTEIN 2A, ...
Authors:Zhang, N, Gordon, S.L, Fritsch, M.J, Esoof, N, Campbell, D, Gourlay, R, Velupillai, S, Macartney, T, Peggie, M, vanAalten, D.M.F, Cousin, M.A, Alessi, D.R.
Deposit date:2014-09-22
Release date:2015-02-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphorylation of Synaptic Vesicle Protein 2A at Thr84 by Casein Kinase 1 Family Kinases Controls the Specific Retrieval of Synaptotagmin-1.
J.Neurosci., 35, 2015
6EEL
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BU of 6eel by Molmil
Crystal Structure of Myoferlin C2A with divalent cation
Descriptor: Myoferlin, STRONTIUM ION
Authors:Sutton, R.B, Harsini, F.M, Rice, A.M.
Deposit date:2018-08-14
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Basis for the Distinct Membrane Binding Activity of the Homologous C2A Domains of Myoferlin and Dysferlin.
J.Mol.Biol., 431, 2019
1K5W
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BU of 1k5w by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE SYNAPTOTAGMIN 1 C2B-DOMAIN: SYNAPTOTAGMIN 1 AS A PHOSPHOLIPID BINDING MACHINE
Descriptor: CALCIUM ION, Synaptotagmin I
Authors:Fernandez, I, Arac, D, Ubach, J, Gerber, S.H, Shin, O, Gao, Y, Anderson, R.G.W, Sudhof, T.C, Rizo, J.
Deposit date:2001-10-12
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of the synaptotagmin 1 C2B-domain: synaptotagmin 1 as a phospholipid binding machine.
Neuron, 32, 2001
4DNL
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BU of 4dnl by Molmil
Crystal structure of a C2 domain of a protein kinase C alpha (PRKCA) from Homo sapiens at 1.90 A resolution
Descriptor: Protein kinase C alpha type, SODIUM ION
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2012-02-08
Release date:2012-02-22
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a C2 domain of a protein kinase C alpha (PRKCA) from Homo sapiens at 1.90 A resolution
To be published
5YQ3
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BU of 5yq3 by Molmil
Solution NMR Structure and Backbone Dynamics of the Partially Disordered Arabidopsis thaliana Phloem Protein 16-1, A Putative mRNA Transporter
Descriptor: At3g55470
Authors:Bhuyan, A.K, Sashi, P.
Deposit date:2017-11-04
Release date:2018-04-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure and Backbone Dynamics of Partially Disordered Arabidopsis thaliana Phloem Protein 16-1, a Putative mRNA Transporter.
Biochemistry, 57, 2018
1GMI
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BU of 1gmi by Molmil
Structure of the c2 domain from novel protein kinase C epsilon
Descriptor: MAGNESIUM ION, PROTEIN KINASE C, EPSILON TYPE
Authors:Ochoa, W.F, Garcia-Garcia, J, Fita, I, Corbalan-Garcia, S, Verdaguer, N, Gomez-Fernandez, J.C.
Deposit date:2001-09-14
Release date:2001-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the C2 Domain from Novel Protein Kinase Cepsilon. A Membrane Binding Model for Ca(2+ )-Independent C2 Domains
J.Mol.Biol., 311, 2001
1W15
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BU of 1w15 by Molmil
rat synaptotagmin 4 C2B domain in the presence of calcium
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Dai, H, Shin, O.-H, Machius, M, Tomchick, D.R, Sudhof, T.C, Rizo, J.
Deposit date:2004-06-16
Release date:2004-08-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Basis for the Evolutionary Inactivation of Ca2+ Binding to Synaptotagmin 4
Nat.Struct.Mol.Biol., 11, 2004
1W16
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BU of 1w16 by Molmil
rat synaptotagmin 4 C2B domain in the absence of calcium
Descriptor: CHLORIDE ION, SODIUM ION, SYNAPTOTAGMIN IV
Authors:Dai, H, Shin, O.-H, Machius, M, Tomchick, D.R, Sudhof, T.C, Rizo, J.
Deposit date:2004-06-16
Release date:2004-08-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the Evolutionary Inactivation of Ca2+ Binding to Synaptotagmin 4
Nat.Struct.Mol.Biol., 11, 2004
4WEE
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BU of 4wee by Molmil
High-resolution structure of Synaptotagmin 1 C2A
Descriptor: SODIUM ION, SULFATE ION, Synaptotagmin-1
Authors:Sutton, R.B, Fuson, K.L.
Deposit date:2014-09-09
Release date:2014-10-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.891 Å)
Cite:High-resolution structure of Synaptotagmin 1 C2A
To Be Published
5W4S
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BU of 5w4s by Molmil
Solution structure of C2 domain from protein kinase C alpha in ternary complex with calcium and V5-pHM peptide
Descriptor: CALCIUM ION, Protein kinase C alpha type, V5-pHM peptide
Authors:Yang, Y, Igumenova, T.I.
Deposit date:2017-06-12
Release date:2018-04-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of Protein Kinase C alpha Regulation by the C-Terminal Tail.
Biophys. J., 114, 2018
4V29
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BU of 4v29 by Molmil
The crystal structure of Arabidopsis thaliana CAR4 in complex with two calcium ions
Descriptor: AT3G17980, CALCIUM ION
Authors:Diaz, M, Albert, A.
Deposit date:2014-10-07
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:C2-Domain Abscisic Acid-Related Proteins Mediate the Interaction of Pyr/Pyl/Rcar Abscisic Acid Receptors with the Plasma Membrane and Regulate Abscisic Acid Sensitivity in Arabidopsis.
Plant Cell, 26, 2014
4Y1S
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BU of 4y1s by Molmil
Structural basis for Ca2+-mediated interaction of the perforin C2 domain with lipid membranes
Descriptor: CALCIUM ION, Perforin-1
Authors:Conroy, P.J, Yagi, H, Whisstock, J.C, Norton, R.S.
Deposit date:2015-02-09
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.611 Å)
Cite:Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.
J.Biol.Chem., 290, 2015
3W56
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BU of 3w56 by Molmil
Structure of a C2 domain
Descriptor: C2 domain protein
Authors:Traore, D.A.K, Whisstock, J.C.
Deposit date:2013-01-24
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
2UZP
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BU of 2uzp by Molmil
Crystal structure of the C2 domain of human protein kinase C gamma.
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, COBALT (II) ION, ...
Authors:Pike, A.C.W, Amos, A, Johansson, C, Sobott, F, Savitsky, P, Berridge, G, Fedorov, O, Umeano, C, Gorrec, F, Bunkoczi, G, Debreczeni, J, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, Knapp, S.
Deposit date:2007-04-30
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of C2 Domain of Protein Kinase C Gamma
To be Published
4Y1T
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BU of 4y1t by Molmil
Structural basis for Ca2+-mediated interaction of the perforin C2 domain with lipid membranes
Descriptor: CALCIUM ION, Perforin-1
Authors:Conroy, P.J, Yagi, H, Whisstock, J.C, Norton, R.S.
Deposit date:2015-02-09
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.666 Å)
Cite:Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.
J.Biol.Chem., 290, 2015
3W57
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BU of 3w57 by Molmil
Structure of a C2 domain
Descriptor: C2 domain protein, CALCIUM ION
Authors:Traore, D.A.K, Whisstock, J.C.
Deposit date:2013-01-24
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
5H4Z
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BU of 5h4z by Molmil
Crystal structure of S202G mutant of human SYT-5 C2A domain
Descriptor: CALCIUM ION, CHLORIDE ION, Synaptotagmin-5
Authors:Qiu, X, Ge, J, Yan, X, Gao, Y, Teng, M, Niu, L.
Deposit date:2016-11-02
Release date:2016-11-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural analysis of Ca(2+)-binding pocket of synaptotagmin 5 C2A domain
Int. J. Biol. Macromol., 95, 2017
8FAM
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BU of 8fam by Molmil
Edited Octopus bimaculoides Synaptotagmin 1 C2A (I248V) at room temperature
Descriptor: Synaptotagmin
Authors:McNeme, S, Dominguez, M.J, Birk, M.A, Rosenthal, J.J, Sutton, R.B.
Deposit date:2022-11-28
Release date:2023-07-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Temperature-dependent RNA editing in octopus extensively recodes the neural proteome.
Cell, 186, 2023
8FAF
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BU of 8faf by Molmil
Unedited Octopus bimaculoides Synaptotagmin 1 C2A at room temperature
Descriptor: Synaptotagmin
Authors:McNeme, S, Dominguez, M.J, Birk, M.A, Rosenthal, J.C, Sutton, R.B.
Deposit date:2022-11-26
Release date:2023-07-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Temperature-dependent RNA editing in octopus extensively recodes the neural proteome.
Cell, 186, 2023
5H4Y
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BU of 5h4y by Molmil
Crystal structure of human synaptotagmin 5 C2A domain
Descriptor: ACETATE ION, CALCIUM ION, Synaptotagmin-5
Authors:Qiu, X, Gao, Y, Teng, M, Niu, L.
Deposit date:2016-11-02
Release date:2016-11-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of Ca(2+)-binding pocket of synaptotagmin 5 C2A domain
Int. J. Biol. Macromol., 95, 2017
2YOA
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BU of 2yoa by Molmil
Synaptotagmin-1 C2B domain with phosphoserine
Descriptor: CALCIUM ION, PHOSPHOSERINE, SYNAPTOTAGMIN-1, ...
Authors:Honigmann, A, van den Bogaart, G, Iraheta, E, Risselada, H.J, Milovanovic, D, Mueller, V, Muellar, S, Diederichsen, U, Fasshauer, D, Grubmuller, H, Hell, S.W, Eggeling, C, Kuhnel, K, Jahn, R.
Deposit date:2012-10-22
Release date:2013-03-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Phosphatidylinositol 4,5-Bisphosphate Clusters Act as Molecular Beacons for Vesicle Recruitment
Nat.Struct.Mol.Biol., 20, 2013
9BKW
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BU of 9bkw by Molmil
Crystal structure of a C2 domain from Trichomonas vaginalis
Descriptor: XYPPX repeat family protein
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-04-29
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a C2 domain from Trichomonas vaginalis
To be published
5A52
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BU of 5a52 by Molmil
The crystal structure of Arabidopsis thaliana CAR1 in complex with one calcium ion
Descriptor: CALCIUM ION, CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN, GLYCEROL, ...
Authors:Fernandez, D, Marquez, J.A.
Deposit date:2015-06-16
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Calcium-Dependent Oligomerization of Car Proteins at Cell Membrane Modulates Aba Signaling.
Proc.Natl.Acad.Sci.USA, 113, 2016

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PDB entries from 2024-07-17

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