Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YAZ
DownloadVisualize
BU of 7yaz by Molmil
Crystal structure of ZAK in complex with compound YH-186
Descriptor: Mitogen-activated protein kinase kinase kinase MLT, ~{N}-[2,4-bis(fluoranyl)-3-[4-[3-[(3~{S})-1-propanoylpyrrolidin-3-yl]oxy-1~{H}-pyrazolo[3,4-b]pyridin-5-yl]-1,2,3-triazol-1-yl]phenyl]-3-phenyl-benzenesulfonamide
Authors:Kong, L.L, Yun, C.H.
Deposit date:2022-06-28
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Rational Design of Covalent Kinase Inhibitors by an Integrated Computational Workflow (Kin-Cov).
J.Med.Chem., 66, 2023
7YAW
DownloadVisualize
BU of 7yaw by Molmil
Crystal structure of ZAK in complex with compound YH-180
Descriptor: Mitogen-activated protein kinase kinase kinase MLT, ~{N}-[3-[[5-[1-[2,6-bis(fluoranyl)-3-[(3-phenylphenyl)sulfonylamino]phenyl]-1,2,3-triazol-4-yl]-1~{H}-pyrazolo[3,4-b]pyridin-3-yl]oxy]propyl]propanamide
Authors:Kong, L.L, Yun, C.H.
Deposit date:2022-06-28
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rational Design of Covalent Kinase Inhibitors by an Integrated Computational Workflow (Kin-Cov).
J.Med.Chem., 66, 2023
8XQS
DownloadVisualize
BU of 8xqs by Molmil
Structure of human class T GPCR TAS2R14-DNGi complex with Flufenamic acid.
Descriptor: 2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID, CHOLESTEROL, Exo-alpha-sialidase,Taste receptor type 2 member 14,LgBiT, ...
Authors:Hu, X.L, Wu, L.J, Hua, T, Liu, Z.J.
Deposit date:2024-01-05
Release date:2024-07-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Bitter taste TAS2R14 activation by intracellular tastants and cholesterol.
Nature, 631, 2024
6YII
DownloadVisualize
BU of 6yii by Molmil
Crystal structure of a Class III adenylyl cyclase-like ATP-binding protein from Pseudomonas aeruginosa
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Moniot, S, Steegborn, C.
Deposit date:2020-04-01
Release date:2020-06-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of a class III adenylyl cyclase-like ATP-binding protein from Pseudomonas aeruginosa.
J.Struct.Biol., 211, 2020
6SEG
DownloadVisualize
BU of 6seg by Molmil
Class1: CENP-A nucleosome in complex with CENP-C central region
Descriptor: DNA (145-MER), Histone H2A type 2-A, Histone H2B type 1-C/E/F/G/I, ...
Authors:Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
Deposit date:2019-07-30
Release date:2019-08-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
7Z7D
DownloadVisualize
BU of 7z7d by Molmil
Tubulin-Todalam-Vinblastine-complex
Descriptor: (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Muehlethaler, T, Milanos, L, Ortega, J.A, Blum, T.B, Gioia, D, Roy, B, Prota, A.E, Cavalli, A, Steinmetz, M.O.
Deposit date:2022-03-15
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational Design of a Novel Tubulin Inhibitor with a Unique Mechanism of Action.
Angew.Chem.Int.Ed.Engl., 61, 2022
6YMV
DownloadVisualize
BU of 6ymv by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase partially-melted transcription initiation complex (PmIC)
Descriptor: DNA (33-MER) NON-TEMPLATE, DNA (33-MER) template, DNA-directed RNA polymerase, ...
Authors:Das, K, Patel, S.S.
Deposit date:2020-04-10
Release date:2020-12-02
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM Structures Reveal Transcription Initiation Steps by Yeast Mitochondrial RNA Polymerase.
Mol.Cell, 81, 2021
1VCC
DownloadVisualize
BU of 1vcc by Molmil
AMINO TERMINAL 9KDA DOMAIN OF VACCINIA VIRUS DNA TOPOISOMERASE I RESIDUES 1-77, EXPERIMENTAL ELECTRON DENSITY FOR RESIDUES 1-77
Descriptor: DNA TOPOISOMERASE I
Authors:Sharma, A, Hanai, R, Mondragon, A.
Deposit date:1995-10-02
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the amino-terminal fragment of vaccinia virus DNA topoisomerase I at 1.6 A resolution.
Structure, 2, 1994
6SE6
DownloadVisualize
BU of 6se6 by Molmil
Class2 : CENP-A nucleosome in complex with CENP-C central region
Descriptor: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
Authors:Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
Deposit date:2019-07-29
Release date:2019-08-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SO5
DownloadVisualize
BU of 6so5 by Molmil
Homo sapiens WRB/CAML heterotetramer in complex with a TRC40 dimer
Descriptor: ATPase ASNA1, Calcium signal-modulating cyclophilin ligand, Tail-anchored protein insertion receptor WRB, ...
Authors:McDowell, M.A, Heimes, M, Wild, K, Flemming, D, Sinning, I.
Deposit date:2019-08-29
Release date:2020-09-09
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural Basis of Tail-Anchored Membrane Protein Biogenesis by the GET Insertase Complex.
Mol.Cell, 80, 2020
6SJF
DownloadVisualize
BU of 6sjf by Molmil
Cryo-EM structure of the RecBCD Chi unrecognised complex
Descriptor: Forked DNA substrate, RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, ...
Authors:Cheng, K, Wilkinson, M, Wigley, D.B.
Deposit date:2019-08-13
Release date:2020-01-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A conformational switch in response to Chi converts RecBCD from phage destruction to DNA repair.
Nat.Struct.Mol.Biol., 27, 2020
7Y6A
DownloadVisualize
BU of 7y6a by Molmil
Crystal structure of Chicken Egg Lysozyme
Descriptor: Lysozyme C, NITRATE ION
Authors:DeMirci, H.
Deposit date:2022-06-18
Release date:2023-04-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source " Turkish DeLight ".
Turk J Biol, 47, 2023
7XOJ
DownloadVisualize
BU of 7xoj by Molmil
Cryo-EM structure of GroEL bound to unfolded substrate (UGT1A) at 2.8 Ang. resolution (Consensus Refinement)
Descriptor: Chaperonin GroEL
Authors:Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:2022-05-01
Release date:2023-05-03
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM
To Be Published
7XON
DownloadVisualize
BU of 7xon by Molmil
Cryo-EM structure of empty ring subunit 1 (ER1) from single empty ring of GroEL-UGT1A complex
Descriptor: Chaperonin GroEL
Authors:Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:2022-05-01
Release date:2023-05-03
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM
To Be Published
7XYE
DownloadVisualize
BU of 7xye by Molmil
The apo structure of Orf1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-06-01
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.482 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXC
DownloadVisualize
BU of 7xxc by Molmil
Orf1-glycine-glycylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-29
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7AEU
DownloadVisualize
BU of 7aeu by Molmil
Pressure wave-exposed human hemoglobin: probe only data (5500 indexed images)
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Barends, T.R.M, Schlichting, I.
Deposit date:2020-09-18
Release date:2021-02-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet.
Nat Commun, 12, 2021
7AEV
DownloadVisualize
BU of 7aev by Molmil
Pressure wave-exposed human hemoglobin: pump/probe data (3500 indexed images)
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Barends, T.R.M, Schlichting, I.
Deposit date:2020-09-18
Release date:2021-02-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet.
Nat Commun, 12, 2021
7AET
DownloadVisualize
BU of 7aet by Molmil
Pressure wave-exposed human hemoglobin: probe only data (3500 indexed images)
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Barends, T.R.M, Schlichting, I.
Deposit date:2020-09-18
Release date:2021-02-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet.
Nat Commun, 12, 2021
6SEE
DownloadVisualize
BU of 6see by Molmil
Class2A : CENP-A nucleosome in complex with CENP-C central region
Descriptor: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
Authors:Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
Deposit date:2019-07-29
Release date:2019-08-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
8Y1W
DownloadVisualize
BU of 8y1w by Molmil
Crystal structure of Thermococcus pacificus dUTPase complexed with dUMP.
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Fukui, K, Murakawa, T, Yano, T.
Deposit date:2024-01-25
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:dUTP pyrophosphatases from hyperthermophilic eubacterium and archaeon: Structural and functional examinations on the suitability for PCR application.
Protein Sci., 33, 2024
6Y8V
DownloadVisualize
BU of 6y8v by Molmil
Rhodospirillum rubrum oxidized CooT solution structure
Descriptor: CooT
Authors:Chagot, B.
Deposit date:2020-03-05
Release date:2020-03-18
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Rhodospirillum rubrum oxidized CooT solution structure
To Be Published
5NF0
DownloadVisualize
BU of 5nf0 by Molmil
Discovery, crystal structures and atomic force microscopy study of thioether ligated D,L-cyclic antimicrobial peptides against multidrug resistant Pseudomonas aeruginosa
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, CYD-TRP-TRD-LYS-LYD-LYS-LYD-LYS-TRD-TRP-CYD-GLY, ...
Authors:Reymond, J.-L, Darbre, T, Stocker, A, Hong, W, van Delden, C, Koehler, T, Luscher, A, Visini, R, Fu, Y, Di Bonaventura, I, He, R.
Deposit date:2017-03-13
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.271 Å)
Cite:Design, crystal structure and atomic force microscopy study of thioether ligated d,l-cyclic antimicrobial peptides against multidrug resistant Pseudomonas aeruginosa.
Chem Sci, 8, 2017
6Y8W
DownloadVisualize
BU of 6y8w by Molmil
Rhodospirillum rubrum reduced CooT solution structure
Descriptor: CooT
Authors:Chagot, B.
Deposit date:2020-03-05
Release date:2020-03-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rhodospirillum rubrum reduced CooT solution structure
To Be Published
8Y1Q
DownloadVisualize
BU of 8y1q by Molmil
Crystal structure of Aquifex aeolicus dUTPase complexed with dUMP.
Descriptor: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION
Authors:Fukui, K, Murakawa, T, Yano, T.
Deposit date:2024-01-25
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:dUTP pyrophosphatases from hyperthermophilic eubacterium and archaeon: Structural and functional examinations on the suitability for PCR application.
Protein Sci., 33, 2024

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon